data_3WSJ # _model_server_result.job_id vEosKxfLEIuIZqfa1kHLiA _model_server_result.datetime_utc '2024-11-16 19:52:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wsj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":212}' # _entry.id 3WSJ # _exptl.entry_id 3WSJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3WSJ _cell.length_a 77.26 _cell.length_b 77.26 _cell.length_c 159.34 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WSJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 2 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 38.63 -66.909123 0 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 77.26 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 333 n n O1 HO1 PG4 sing 334 n n C1 C2 PG4 sing 335 n n C1 H11 PG4 sing 336 n n C1 H12 PG4 sing 337 n n C2 O2 PG4 sing 338 n n C2 H21 PG4 sing 339 n n C2 H22 PG4 sing 340 n n O2 C3 PG4 sing 341 n n C3 C4 PG4 sing 342 n n C3 H31 PG4 sing 343 n n C3 H32 PG4 sing 344 n n C4 O3 PG4 sing 345 n n C4 H41 PG4 sing 346 n n C4 H42 PG4 sing 347 n n O3 C5 PG4 sing 348 n n C5 C6 PG4 sing 349 n n C5 H51 PG4 sing 350 n n C5 H52 PG4 sing 351 n n C6 O4 PG4 sing 352 n n C6 H61 PG4 sing 353 n n C6 H62 PG4 sing 354 n n O4 C7 PG4 sing 355 n n C7 C8 PG4 sing 356 n n C7 H71 PG4 sing 357 n n C7 H72 PG4 sing 358 n n C8 O5 PG4 sing 359 n n C8 H81 PG4 sing 360 n n C8 H82 PG4 sing 361 n n O5 HO5 PG4 sing 362 n n # _atom_sites.entry_id 3WSJ _atom_sites.fract_transf_matrix[1][1] 0.012943 _atom_sites.fract_transf_matrix[1][2] 0.007473 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014946 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006276 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MK1 A 1 201 1 MK1 INX . D 3 SO4 A 1 202 1 SO4 SO4 . E 3 SO4 A 1 203 2 SO4 SO4 . F 3 SO4 A 1 204 3 SO4 SO4 . G 3 SO4 A 1 205 4 SO4 SO4 . H 3 SO4 A 1 206 5 SO4 SO4 . I 3 SO4 A 1 207 6 SO4 SO4 . J 3 SO4 A 1 208 7 SO4 SO4 . K 3 SO4 A 1 209 9 SO4 SO4 . L 3 SO4 A 1 210 12 SO4 SO4 . M 3 SO4 A 1 211 13 SO4 SO4 . N 4 PG4 A 1 212 1 PG4 PG4 . O 3 SO4 B 1 201 10 SO4 SO4 . P 3 SO4 B 1 202 11 SO4 SO4 . Q 3 SO4 B 1 203 14 SO4 SO4 . R 5 HOH A 1 301 1 HOH HOH . R 5 HOH A 2 302 3 HOH HOH . R 5 HOH A 3 303 4 HOH HOH . R 5 HOH A 4 304 5 HOH HOH . R 5 HOH A 5 305 10 HOH HOH . R 5 HOH A 6 306 11 HOH HOH . R 5 HOH A 7 307 12 HOH HOH . R 5 HOH A 8 308 13 HOH HOH . R 5 HOH A 9 309 17 HOH HOH . R 5 HOH A 10 310 18 HOH HOH . R 5 HOH A 11 311 19 HOH HOH . R 5 HOH A 12 312 20 HOH HOH . R 5 HOH A 13 313 21 HOH HOH . R 5 HOH A 14 314 23 HOH HOH . R 5 HOH A 15 315 24 HOH HOH . R 5 HOH A 16 316 25 HOH HOH . R 5 HOH A 17 317 26 HOH HOH . R 5 HOH A 18 318 28 HOH HOH . R 5 HOH A 19 319 29 HOH HOH . R 5 HOH A 20 320 43 HOH HOH . R 5 HOH A 21 321 44 HOH HOH . R 5 HOH A 22 322 45 HOH HOH . R 5 HOH A 23 323 47 HOH HOH . R 5 HOH A 24 324 48 HOH HOH . R 5 HOH A 25 325 49 HOH HOH . R 5 HOH A 26 326 50 HOH HOH . R 5 HOH A 27 327 51 HOH HOH . R 5 HOH A 28 328 52 HOH HOH . R 5 HOH A 29 329 60 HOH HOH . R 5 HOH A 30 330 61 HOH HOH . R 5 HOH A 31 331 62 HOH HOH . R 5 HOH A 32 332 63 HOH HOH . R 5 HOH A 33 333 64 HOH HOH . R 5 HOH A 34 334 65 HOH HOH . R 5 HOH A 35 335 66 HOH HOH . R 5 HOH A 36 336 71 HOH HOH . S 5 HOH B 1 301 2 HOH HOH . S 5 HOH B 2 302 6 HOH HOH . S 5 HOH B 3 303 7 HOH HOH . S 5 HOH B 4 304 8 HOH HOH . S 5 HOH B 5 305 9 HOH HOH . S 5 HOH B 6 306 14 HOH HOH . S 5 HOH B 7 307 22 HOH HOH . S 5 HOH B 8 308 27 HOH HOH . S 5 HOH B 9 309 30 HOH HOH . S 5 HOH B 10 310 31 HOH HOH . S 5 HOH B 11 311 32 HOH HOH . S 5 HOH B 12 312 33 HOH HOH . S 5 HOH B 13 313 34 HOH HOH . S 5 HOH B 14 314 35 HOH HOH . S 5 HOH B 15 315 36 HOH HOH . S 5 HOH B 16 316 38 HOH HOH . S 5 HOH B 17 317 39 HOH HOH . S 5 HOH B 18 318 40 HOH HOH . S 5 HOH B 19 319 41 HOH HOH . S 5 HOH B 20 320 42 HOH HOH . S 5 HOH B 21 321 46 HOH HOH . S 5 HOH B 22 322 53 HOH HOH . S 5 HOH B 23 323 54 HOH HOH . S 5 HOH B 24 324 55 HOH HOH . S 5 HOH B 25 325 56 HOH HOH . S 5 HOH B 26 326 57 HOH HOH . S 5 HOH B 27 327 58 HOH HOH . S 5 HOH B 28 328 59 HOH HOH . S 5 HOH B 29 329 67 HOH HOH . S 5 HOH B 30 330 68 HOH HOH . S 5 HOH B 31 331 69 HOH HOH . S 5 HOH B 32 332 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . N 4 57.214 -8.825 10.113 1 41.6 ? O1 PG4 212 A 1 HETATM 2 C C1 PG4 . . . N 4 58.31 -9.061 11.004 1 38.17 ? C1 PG4 212 A 1 HETATM 3 C C2 PG4 . . . N 4 58.085 -8.305 12.308 1 36.02 ? C2 PG4 212 A 1 HETATM 4 O O2 PG4 . . . N 4 58.062 -6.903 12.049 1 42.02 ? O2 PG4 212 A 1 HETATM 5 C C3 PG4 . . . N 4 58.13 -6.152 13.259 1 44.87 ? C3 PG4 212 A 1 HETATM 6 C C4 PG4 . . . N 4 58.274 -4.668 12.944 1 43.34 ? C4 PG4 212 A 1 HETATM 7 O O3 PG4 . . . N 4 59.212 -4.482 11.884 1 48.99 ? O3 PG4 212 A 1 HETATM 8 C C5 PG4 . . . N 4 59.846 -3.206 11.968 1 52.43 ? C5 PG4 212 A 1 HETATM 9 C C6 PG4 . . . N 4 60.223 -2.697 10.58 1 53.47 ? C6 PG4 212 A 1 HETATM 10 O O4 PG4 . . . N 4 61.153 -3.574 9.947 1 50.49 ? O4 PG4 212 A 1 HETATM 11 C C7 PG4 . . . N 4 61.52 -3.085 8.658 1 51.34 ? C7 PG4 212 A 1 HETATM 12 C C8 PG4 . . . N 4 62.429 -4.085 7.953 1 56.53 ? C8 PG4 212 A 1 HETATM 13 O O5 PG4 . . . N 4 61.657 -5.199 7.486 1 57.43 ? O5 PG4 212 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #