data_3WTI # _model_server_result.job_id CgL00K1fYZM53BJonTCUQw _model_server_result.datetime_utc '2024-11-16 04:50:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wti # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 3WTI # _exptl.entry_id 3WTI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 249.678 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(2-chloro-1,3-thiazol-5-yl)methyl]-3-methyl-2-nitroguanidine _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3WTI _cell.length_a 74.145 _cell.length_b 74.145 _cell.length_c 351.612 _cell.Z_PDB 30 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WTI _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 127 A CYS 123 1_555 A SG CYS 140 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 191 A CYS 187 1_555 A SG CYS 192 A CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 B SG CYS 127 B CYS 123 1_555 B SG CYS 140 B CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 B SG CYS 191 B CYS 187 1_555 B SG CYS 192 B CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf5 C SG CYS 127 C CYS 123 1_555 C SG CYS 140 C CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 C SG CYS 191 C CYS 187 1_555 C SG CYS 192 C CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf7 D SG CYS 127 D CYS 123 1_555 D SG CYS 140 D CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf8 D SG CYS 191 D CYS 187 1_555 D SG CYS 192 D CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf9 E SG CYS 127 E CYS 123 1_555 E SG CYS 140 E CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf10 E SG CYS 191 E CYS 187 1_555 E SG CYS 192 E CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'C6 H8 Cl N5 O2 S' _chem_comp.formula_weight 249.678 _chem_comp.id CT4 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(2-chloro-1,3-thiazol-5-yl)methyl]-3-methyl-2-nitroguanidine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C CT4 sing 70 n n N C1 CT4 sing 71 n n C N1 CT4 sing 72 n n C N2 CT4 doub 73 n n N1 C3 CT4 sing 74 e n N2 N5 CT4 sing 75 n n C1 C2 CT4 sing 76 n n C2 S CT4 sing 77 n y C2 C5 CT4 doub 78 n y S C4 CT4 sing 79 n y C4 N4 CT4 doub 80 n y C4 CL CT4 sing 81 n n N4 C5 CT4 sing 82 n y N5 O1 CT4 sing 83 n n N5 O2 CT4 doub 84 n n N HN CT4 sing 85 n n N1 HN1 CT4 sing 86 n n C1 H1 CT4 sing 87 n n C1 H1A CT4 sing 88 n n C3 H3 CT4 sing 89 n n C3 H3A CT4 sing 90 n n C3 H3B CT4 sing 91 n n C5 H5 CT4 sing 92 n n # _atom_sites.entry_id 3WTI _atom_sites.fract_transf_matrix[1][1] 0.013487 _atom_sites.fract_transf_matrix[1][2] 0.007787 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015574 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002844 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 CT4 A 1 301 301 CT4 CT4 . G 2 CT4 B 1 301 301 CT4 CT4 . H 2 CT4 C 1 301 301 CT4 CT4 . I 2 CT4 D 1 301 1 CT4 CT4 . J 2 CT4 E 1 301 301 CT4 CT4 . K 3 HOH A 1 401 401 HOH HOH . K 3 HOH A 2 402 402 HOH HOH . K 3 HOH A 3 403 403 HOH HOH . K 3 HOH A 4 404 404 HOH HOH . K 3 HOH A 5 405 405 HOH HOH . K 3 HOH A 6 406 406 HOH HOH . K 3 HOH A 7 407 407 HOH HOH . K 3 HOH A 8 408 408 HOH HOH . K 3 HOH A 9 409 409 HOH HOH . K 3 HOH A 10 410 410 HOH HOH . K 3 HOH A 11 411 411 HOH HOH . K 3 HOH A 12 412 412 HOH HOH . K 3 HOH A 13 413 413 HOH HOH . K 3 HOH A 14 414 414 HOH HOH . K 3 HOH A 15 415 415 HOH HOH . K 3 HOH A 16 416 416 HOH HOH . K 3 HOH A 17 417 417 HOH HOH . K 3 HOH A 18 418 418 HOH HOH . K 3 HOH A 19 419 419 HOH HOH . K 3 HOH A 20 420 420 HOH HOH . K 3 HOH A 21 421 421 HOH HOH . K 3 HOH A 22 422 422 HOH HOH . K 3 HOH A 23 423 423 HOH HOH . K 3 HOH A 24 424 424 HOH HOH . K 3 HOH A 25 425 425 HOH HOH . K 3 HOH A 26 426 426 HOH HOH . K 3 HOH A 27 427 428 HOH HOH . K 3 HOH A 28 428 430 HOH HOH . K 3 HOH A 29 429 333 HOH HOH . K 3 HOH A 30 430 427 HOH HOH . K 3 HOH A 31 431 405 HOH HOH . K 3 HOH A 32 432 409 HOH HOH . K 3 HOH A 33 433 5 HOH HOH . K 3 HOH A 34 434 9 HOH HOH . K 3 HOH A 35 435 12 HOH HOH . K 3 HOH A 36 436 13 HOH HOH . K 3 HOH A 37 437 14 HOH HOH . L 3 HOH B 1 401 301 HOH HOH . L 3 HOH B 2 402 302 HOH HOH . L 3 HOH B 3 403 303 HOH HOH . L 3 HOH B 4 404 304 HOH HOH . L 3 HOH B 5 405 305 HOH HOH . L 3 HOH B 6 406 306 HOH HOH . L 3 HOH B 7 407 307 HOH HOH . L 3 HOH B 8 408 308 HOH HOH . L 3 HOH B 9 409 309 HOH HOH . L 3 HOH B 10 410 310 HOH HOH . L 3 HOH B 11 411 311 HOH HOH . L 3 HOH B 12 412 312 HOH HOH . L 3 HOH B 13 413 313 HOH HOH . L 3 HOH B 14 414 314 HOH HOH . L 3 HOH B 15 415 315 HOH HOH . L 3 HOH B 16 416 316 HOH HOH . L 3 HOH B 17 417 317 HOH HOH . L 3 HOH B 18 418 318 HOH HOH . L 3 HOH B 19 419 319 HOH HOH . L 3 HOH B 20 420 320 HOH HOH . L 3 HOH B 21 421 321 HOH HOH . L 3 HOH B 22 422 322 HOH HOH . L 3 HOH B 23 423 323 HOH HOH . L 3 HOH B 24 424 324 HOH HOH . L 3 HOH B 25 425 325 HOH HOH . L 3 HOH B 26 426 326 HOH HOH . L 3 HOH B 27 427 327 HOH HOH . L 3 HOH B 28 428 328 HOH HOH . L 3 HOH B 29 429 329 HOH HOH . L 3 HOH B 30 430 331 HOH HOH . L 3 HOH B 31 431 332 HOH HOH . L 3 HOH B 32 432 334 HOH HOH . L 3 HOH B 33 433 410 HOH HOH . L 3 HOH B 34 434 4 HOH HOH . L 3 HOH B 35 435 8 HOH HOH . L 3 HOH B 36 436 10 HOH HOH . L 3 HOH B 37 437 15 HOH HOH . M 3 HOH C 1 401 330 HOH HOH . M 3 HOH C 2 402 401 HOH HOH . M 3 HOH C 3 403 402 HOH HOH . M 3 HOH C 4 404 403 HOH HOH . M 3 HOH C 5 405 404 HOH HOH . M 3 HOH C 6 406 405 HOH HOH . M 3 HOH C 7 407 406 HOH HOH . M 3 HOH C 8 408 407 HOH HOH . M 3 HOH C 9 409 408 HOH HOH . M 3 HOH C 10 410 409 HOH HOH . M 3 HOH C 11 411 411 HOH HOH . M 3 HOH C 12 412 412 HOH HOH . M 3 HOH C 13 413 413 HOH HOH . M 3 HOH C 14 414 414 HOH HOH . M 3 HOH C 15 415 415 HOH HOH . M 3 HOH C 16 416 416 HOH HOH . M 3 HOH C 17 417 417 HOH HOH . M 3 HOH C 18 418 418 HOH HOH . M 3 HOH C 19 419 419 HOH HOH . M 3 HOH C 20 420 420 HOH HOH . M 3 HOH C 21 421 421 HOH HOH . M 3 HOH C 22 422 422 HOH HOH . M 3 HOH C 23 423 423 HOH HOH . M 3 HOH C 24 424 424 HOH HOH . M 3 HOH C 25 425 425 HOH HOH . M 3 HOH C 26 426 426 HOH HOH . M 3 HOH C 27 427 406 HOH HOH . M 3 HOH C 28 428 432 HOH HOH . M 3 HOH C 29 429 1 HOH HOH . M 3 HOH C 30 430 7 HOH HOH . M 3 HOH C 31 431 16 HOH HOH . M 3 HOH C 32 432 17 HOH HOH . N 3 HOH D 1 401 401 HOH HOH . N 3 HOH D 2 402 402 HOH HOH . N 3 HOH D 3 403 403 HOH HOH . N 3 HOH D 4 404 404 HOH HOH . N 3 HOH D 5 405 405 HOH HOH . N 3 HOH D 6 406 407 HOH HOH . N 3 HOH D 7 407 408 HOH HOH . N 3 HOH D 8 408 409 HOH HOH . N 3 HOH D 9 409 410 HOH HOH . N 3 HOH D 10 410 411 HOH HOH . N 3 HOH D 11 411 412 HOH HOH . N 3 HOH D 12 412 413 HOH HOH . N 3 HOH D 13 413 414 HOH HOH . N 3 HOH D 14 414 415 HOH HOH . N 3 HOH D 15 415 416 HOH HOH . N 3 HOH D 16 416 417 HOH HOH . N 3 HOH D 17 417 418 HOH HOH . N 3 HOH D 18 418 419 HOH HOH . N 3 HOH D 19 419 420 HOH HOH . N 3 HOH D 20 420 421 HOH HOH . N 3 HOH D 21 421 422 HOH HOH . N 3 HOH D 22 422 423 HOH HOH . N 3 HOH D 23 423 425 HOH HOH . N 3 HOH D 24 424 426 HOH HOH . N 3 HOH D 25 425 428 HOH HOH . N 3 HOH D 26 426 429 HOH HOH . N 3 HOH D 27 427 430 HOH HOH . N 3 HOH D 28 428 431 HOH HOH . N 3 HOH D 29 429 433 HOH HOH . N 3 HOH D 30 430 434 HOH HOH . N 3 HOH D 31 431 3 HOH HOH . O 3 HOH E 1 401 427 HOH HOH . O 3 HOH E 2 402 424 HOH HOH . O 3 HOH E 3 403 401 HOH HOH . O 3 HOH E 4 404 402 HOH HOH . O 3 HOH E 5 405 403 HOH HOH . O 3 HOH E 6 406 404 HOH HOH . O 3 HOH E 7 407 406 HOH HOH . O 3 HOH E 8 408 407 HOH HOH . O 3 HOH E 9 409 408 HOH HOH . O 3 HOH E 10 410 410 HOH HOH . O 3 HOH E 11 411 411 HOH HOH . O 3 HOH E 12 412 412 HOH HOH . O 3 HOH E 13 413 413 HOH HOH . O 3 HOH E 14 414 414 HOH HOH . O 3 HOH E 15 415 415 HOH HOH . O 3 HOH E 16 416 416 HOH HOH . O 3 HOH E 17 417 417 HOH HOH . O 3 HOH E 18 418 418 HOH HOH . O 3 HOH E 19 419 419 HOH HOH . O 3 HOH E 20 420 420 HOH HOH . O 3 HOH E 21 421 421 HOH HOH . O 3 HOH E 22 422 422 HOH HOH . O 3 HOH E 23 423 423 HOH HOH . O 3 HOH E 24 424 424 HOH HOH . O 3 HOH E 25 425 425 HOH HOH . O 3 HOH E 26 426 426 HOH HOH . O 3 HOH E 27 427 427 HOH HOH . O 3 HOH E 28 428 428 HOH HOH . O 3 HOH E 29 429 429 HOH HOH . O 3 HOH E 30 430 430 HOH HOH . O 3 HOH E 31 431 431 HOH HOH . O 3 HOH E 32 432 432 HOH HOH . O 3 HOH E 33 433 433 HOH HOH . O 3 HOH E 34 434 434 HOH HOH . O 3 HOH E 35 435 435 HOH HOH . O 3 HOH E 36 436 436 HOH HOH . O 3 HOH E 37 437 437 HOH HOH . O 3 HOH E 38 438 438 HOH HOH . O 3 HOH E 39 439 439 HOH HOH . O 3 HOH E 40 440 2 HOH HOH . O 3 HOH E 41 441 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N CT4 . . . G 2 8.812 -6.098 -34.543 1 44.2 ? N CT4 301 B 1 HETATM 2 C C CT4 . . . G 2 8.211 -5.647 -33.437 1 44.98 ? C CT4 301 B 1 HETATM 3 N N1 CT4 . . . G 2 8.521 -6.188 -32.259 1 43.9 ? N1 CT4 301 B 1 HETATM 4 N N2 CT4 . . . G 2 7.309 -4.672 -33.71 1 47.08 ? N2 CT4 301 B 1 HETATM 5 C C1 CT4 . . . G 2 8.548 -5.541 -35.852 1 45.41 ? C1 CT4 301 B 1 HETATM 6 C C2 CT4 . . . G 2 9.781 -4.894 -36.321 1 44.18 ? C2 CT4 301 B 1 HETATM 7 C C3 CT4 . . . G 2 9.502 -7.241 -32.066 1 41.9 ? C3 CT4 301 B 1 HETATM 8 S S CT4 . . . G 2 10.055 -4.467 -37.966 1 44.88 ? S CT4 301 B 1 HETATM 9 C C4 CT4 . . . G 2 11.604 -3.884 -37.51 1 42.98 ? C4 CT4 301 B 1 HETATM 10 N N4 CT4 . . . G 2 11.917 -3.978 -36.271 1 41.92 ? N4 CT4 301 B 1 HETATM 11 C C5 CT4 . . . G 2 10.869 -4.557 -35.596 1 42.58 ? C5 CT4 301 B 1 HETATM 12 CL CL CT4 . . . G 2 12.661 -3.236 -38.694 1 42.81 ? CL CT4 301 B 1 HETATM 13 N N5 CT4 . . . G 2 6.609 -4.1 -32.718 1 48.31 ? N5 CT4 301 B 1 HETATM 14 O O1 CT4 . . . G 2 5.792 -3.208 -33.021 1 50.43 ? O1 CT4 301 B 1 HETATM 15 O O2 CT4 . . . G 2 6.772 -4.441 -31.532 1 47.53 ? O2 CT4 301 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 15 #