data_3WVM # _model_server_result.job_id oqh7GUxC6iefseGHg1M7KA _model_server_result.datetime_utc '2024-11-13 04:18:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wvm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 3WVM # _exptl.entry_id 3WVM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3WVM _cell.length_a 54.557 _cell.length_b 69.418 _cell.length_c 33.812 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WVM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 237 n n O1 H1 P6G sing 238 n n C2 C3 P6G sing 239 n n C2 H21 P6G sing 240 n n C2 H22 P6G sing 241 n n C3 O4 P6G sing 242 n n C3 H31 P6G sing 243 n n C3 H32 P6G sing 244 n n O4 C5 P6G sing 245 n n C5 C6 P6G sing 246 n n C5 H51 P6G sing 247 n n C5 H52 P6G sing 248 n n C6 O7 P6G sing 249 n n C6 H61 P6G sing 250 n n C6 H62 P6G sing 251 n n O7 C8 P6G sing 252 n n C8 C9 P6G sing 253 n n C8 H81 P6G sing 254 n n C8 H82 P6G sing 255 n n C9 O10 P6G sing 256 n n C9 H91 P6G sing 257 n n C9 H92 P6G sing 258 n n O10 C11 P6G sing 259 n n C11 C12 P6G sing 260 n n C11 H111 P6G sing 261 n n C11 H112 P6G sing 262 n n C12 O13 P6G sing 263 n n C12 H121 P6G sing 264 n n C12 H122 P6G sing 265 n n O13 C14 P6G sing 266 n n C14 C15 P6G sing 267 n n C14 H141 P6G sing 268 n n C14 H142 P6G sing 269 n n C15 O16 P6G sing 270 n n C15 H151 P6G sing 271 n n C15 H152 P6G sing 272 n n O16 C17 P6G sing 273 n n C17 C18 P6G sing 274 n n C17 H171 P6G sing 275 n n C17 H172 P6G sing 276 n n C18 O19 P6G sing 277 n n C18 H181 P6G sing 278 n n C18 H182 P6G sing 279 n n O19 H19 P6G sing 280 n n # _atom_sites.entry_id 3WVM _atom_sites.fract_transf_matrix[1][1] 0.018329 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014405 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 STE A 1 200 200 STE STE . C 3 P6G A 1 201 201 P6G P6G . D 3 P6G A 1 202 202 P6G P6G . E 4 HOH A 1 1001 1001 HOH HOH . E 4 HOH A 2 1002 1002 HOH HOH . E 4 HOH A 3 1003 1003 HOH HOH . E 4 HOH A 4 1004 1004 HOH HOH . E 4 HOH A 5 1005 1005 HOH HOH . E 4 HOH A 6 1006 1006 HOH HOH . E 4 HOH A 7 1007 1007 HOH HOH . E 4 HOH A 8 1008 1008 HOH HOH . E 4 HOH A 9 1009 1009 HOH HOH . E 4 HOH A 10 1010 1010 HOH HOH . E 4 HOH A 11 1011 1011 HOH HOH . E 4 HOH A 12 1012 1012 HOH HOH . E 4 HOH A 13 1013 1013 HOH HOH . E 4 HOH A 14 1014 1014 HOH HOH . E 4 HOH A 15 1015 1015 HOH HOH . E 4 HOH A 16 1016 1016 HOH HOH . E 4 HOH A 17 1017 1017 HOH HOH . E 4 HOH A 18 1018 1018 HOH HOH . E 4 HOH A 19 1019 1019 HOH HOH . E 4 HOH A 20 1020 1020 HOH HOH . E 4 HOH A 21 1021 1021 HOH HOH . E 4 HOH A 22 1022 1022 HOH HOH . E 4 HOH A 23 1023 1023 HOH HOH . E 4 HOH A 24 1024 1024 HOH HOH . E 4 HOH A 25 1025 1025 HOH HOH . E 4 HOH A 26 1026 1026 HOH HOH . E 4 HOH A 27 1027 1027 HOH HOH . E 4 HOH A 28 1028 1028 HOH HOH . E 4 HOH A 29 1029 1029 HOH HOH . E 4 HOH A 30 1030 1030 HOH HOH . E 4 HOH A 31 1031 1031 HOH HOH . E 4 HOH A 32 1032 1032 HOH HOH . E 4 HOH A 33 1033 1033 HOH HOH . E 4 HOH A 34 1034 1034 HOH HOH . E 4 HOH A 35 1035 1035 HOH HOH . E 4 HOH A 36 1036 1036 HOH HOH . E 4 HOH A 37 1037 1037 HOH HOH . E 4 HOH A 38 1038 1038 HOH HOH . E 4 HOH A 39 1039 1039 HOH HOH . E 4 HOH A 40 1040 1040 HOH HOH . E 4 HOH A 41 1041 1041 HOH HOH . E 4 HOH A 42 1042 1042 HOH HOH . E 4 HOH A 43 1043 1043 HOH HOH . E 4 HOH A 44 1044 1044 HOH HOH . E 4 HOH A 45 1045 1045 HOH HOH . E 4 HOH A 46 1046 1046 HOH HOH . E 4 HOH A 47 1047 1047 HOH HOH . E 4 HOH A 48 1048 1048 HOH HOH . E 4 HOH A 49 1049 1049 HOH HOH . E 4 HOH A 50 1050 1050 HOH HOH . E 4 HOH A 51 1051 1051 HOH HOH . E 4 HOH A 52 1052 1052 HOH HOH . E 4 HOH A 53 1053 1053 HOH HOH . E 4 HOH A 54 1054 1054 HOH HOH . E 4 HOH A 55 1055 1055 HOH HOH . E 4 HOH A 56 1056 1056 HOH HOH . E 4 HOH A 57 1057 1057 HOH HOH . E 4 HOH A 58 1058 1058 HOH HOH . E 4 HOH A 59 1059 1059 HOH HOH . E 4 HOH A 60 1060 1060 HOH HOH . E 4 HOH A 61 1061 1061 HOH HOH . E 4 HOH A 62 1062 1062 HOH HOH . E 4 HOH A 63 1063 1063 HOH HOH . E 4 HOH A 64 1064 1064 HOH HOH . E 4 HOH A 65 1065 1065 HOH HOH . E 4 HOH A 66 1066 1066 HOH HOH . E 4 HOH A 67 1067 1067 HOH HOH . E 4 HOH A 68 1068 1068 HOH HOH . E 4 HOH A 69 1069 1069 HOH HOH . E 4 HOH A 70 1070 1070 HOH HOH . E 4 HOH A 71 1071 1071 HOH HOH . E 4 HOH A 72 1072 1072 HOH HOH . E 4 HOH A 73 1073 1073 HOH HOH . E 4 HOH A 74 1074 1074 HOH HOH . E 4 HOH A 75 1075 1075 HOH HOH . E 4 HOH A 76 1076 1076 HOH HOH . E 4 HOH A 77 1077 1077 HOH HOH . E 4 HOH A 78 1078 1078 HOH HOH . E 4 HOH A 79 1079 1079 HOH HOH . E 4 HOH A 80 1080 1080 HOH HOH . E 4 HOH A 81 1081 1081 HOH HOH . E 4 HOH A 82 1082 1082 HOH HOH . E 4 HOH A 83 1083 1083 HOH HOH . E 4 HOH A 84 1084 1084 HOH HOH . E 4 HOH A 85 1085 1085 HOH HOH . E 4 HOH A 86 1086 1086 HOH HOH . E 4 HOH A 87 1087 1087 HOH HOH . E 4 HOH A 88 1088 1088 HOH HOH . E 4 HOH A 89 1089 1089 HOH HOH . E 4 HOH A 90 1090 1090 HOH HOH . E 4 HOH A 91 1091 1091 HOH HOH . E 4 HOH A 92 1092 1092 HOH HOH . E 4 HOH A 93 1093 1093 HOH HOH . E 4 HOH A 94 1094 1094 HOH HOH . E 4 HOH A 95 1095 1095 HOH HOH . E 4 HOH A 96 1096 1096 HOH HOH . E 4 HOH A 97 1097 1097 HOH HOH . E 4 HOH A 98 1098 1098 HOH HOH . E 4 HOH A 99 1099 1099 HOH HOH . E 4 HOH A 100 1100 1100 HOH HOH . E 4 HOH A 101 1101 1101 HOH HOH . E 4 HOH A 102 1102 1102 HOH HOH . E 4 HOH A 103 1103 1103 HOH HOH . E 4 HOH A 104 1104 1104 HOH HOH . E 4 HOH A 105 1105 1105 HOH HOH . E 4 HOH A 106 1106 1106 HOH HOH . E 4 HOH A 107 1107 1107 HOH HOH . E 4 HOH A 108 1108 1108 HOH HOH . E 4 HOH A 109 1109 1109 HOH HOH . E 4 HOH A 110 1110 1110 HOH HOH . E 4 HOH A 111 1111 1111 HOH HOH . E 4 HOH A 112 1112 1112 HOH HOH . E 4 HOH A 113 1113 1113 HOH HOH . E 4 HOH A 114 1114 1114 HOH HOH . E 4 HOH A 115 1115 1115 HOH HOH . E 4 HOH A 116 1116 1116 HOH HOH . E 4 HOH A 117 1117 1117 HOH HOH . E 4 HOH A 118 1118 1118 HOH HOH . E 4 HOH A 119 1119 1119 HOH HOH . E 4 HOH A 120 1120 1120 HOH HOH . E 4 HOH A 121 1121 1121 HOH HOH . E 4 HOH A 122 1122 1122 HOH HOH . E 4 HOH A 123 1123 1123 HOH HOH . E 4 HOH A 124 1124 1124 HOH HOH . E 4 HOH A 125 1125 1125 HOH HOH . E 4 HOH A 126 1126 1126 HOH HOH . E 4 HOH A 127 1127 1127 HOH HOH . E 4 HOH A 128 1128 1128 HOH HOH . E 4 HOH A 129 1129 1129 HOH HOH . E 4 HOH A 130 1130 1130 HOH HOH . E 4 HOH A 131 1131 1131 HOH HOH . E 4 HOH A 132 1132 1132 HOH HOH . E 4 HOH A 133 1133 1133 HOH HOH . E 4 HOH A 134 1134 1134 HOH HOH . E 4 HOH A 135 1135 1135 HOH HOH . E 4 HOH A 136 1136 1136 HOH HOH . E 4 HOH A 137 1137 1137 HOH HOH . E 4 HOH A 138 1138 1138 HOH HOH . E 4 HOH A 139 1139 1139 HOH HOH . E 4 HOH A 140 1140 1140 HOH HOH . E 4 HOH A 141 1141 1141 HOH HOH . E 4 HOH A 142 1142 1142 HOH HOH . E 4 HOH A 143 1143 1143 HOH HOH . E 4 HOH A 144 1144 1144 HOH HOH . E 4 HOH A 145 1145 1145 HOH HOH . E 4 HOH A 146 1146 1146 HOH HOH . E 4 HOH A 147 1147 1147 HOH HOH . E 4 HOH A 148 1148 1148 HOH HOH . E 4 HOH A 149 1149 1149 HOH HOH . E 4 HOH A 150 1150 1150 HOH HOH . E 4 HOH A 151 1151 1151 HOH HOH . E 4 HOH A 152 1152 1152 HOH HOH . E 4 HOH A 153 1153 1153 HOH HOH . E 4 HOH A 154 1154 1154 HOH HOH . E 4 HOH A 155 1155 1155 HOH HOH . E 4 HOH A 156 1156 1157 HOH HOH . E 4 HOH A 157 1157 1158 HOH HOH . E 4 HOH A 158 1158 1159 HOH HOH . E 4 HOH A 159 1159 1160 HOH HOH . E 4 HOH A 160 1160 1161 HOH HOH . E 4 HOH A 161 1161 1163 HOH HOH . E 4 HOH A 162 1162 1164 HOH HOH . E 4 HOH A 163 1163 1165 HOH HOH . E 4 HOH A 164 1164 1166 HOH HOH . E 4 HOH A 165 1165 1168 HOH HOH . E 4 HOH A 166 1166 1169 HOH HOH . E 4 HOH A 167 1167 1170 HOH HOH . E 4 HOH A 168 1168 1171 HOH HOH . E 4 HOH A 169 1169 1172 HOH HOH . E 4 HOH A 170 1170 1173 HOH HOH . E 4 HOH A 171 1171 1174 HOH HOH . E 4 HOH A 172 1172 1175 HOH HOH . E 4 HOH A 173 1173 1176 HOH HOH . E 4 HOH A 174 1174 1177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . D 3 27.22 -1.738 -7.285 0.68 33.73 ? O1 P6G 202 A 1 HETATM 2 C C2 P6G . . . D 3 27.352 -2.856 -6.324 0.68 25.17 ? C2 P6G 202 A 1 HETATM 3 C C3 P6G . . . D 3 27.858 -4.142 -6.972 0.68 24.62 ? C3 P6G 202 A 1 HETATM 4 O O4 P6G . . . D 3 27.126 -4.711 -8.062 0.68 29.8 ? O4 P6G 202 A 1 HETATM 5 C C5 P6G . . . D 3 27.712 -5.915 -8.526 0.68 25.27 ? C5 P6G 202 A 1 HETATM 6 C C6 P6G . . . D 3 26.963 -6.456 -9.731 0.68 30.74 ? C6 P6G 202 A 1 HETATM 7 O O7 P6G . . . D 3 26.917 -5.529 -10.767 0.68 23.11 ? O7 P6G 202 A 1 HETATM 8 C C8 P6G . . . D 3 26.094 -5.999 -11.872 0.68 24.88 ? C8 P6G 202 A 1 HETATM 9 C C9 P6G . . . D 3 26.144 -5.044 -13.068 0.68 19.03 ? C9 P6G 202 A 1 HETATM 10 O O10 P6G . . . D 3 25.614 -3.78 -12.75 0.68 20.55 ? O10 P6G 202 A 1 HETATM 11 C C11 P6G . . . D 3 25.648 -2.893 -13.836 0.68 23.51 ? C11 P6G 202 A 1 HETATM 12 C C12 P6G . . . D 3 24.687 -1.833 -13.43 0.68 22.56 ? C12 P6G 202 A 1 HETATM 13 O O13 P6G . . . D 3 25.226 -1.133 -12.257 0.68 21.92 ? O13 P6G 202 A 1 HETATM 14 C C14 P6G . . . D 3 24.38 0.082 -12.117 0.68 19.48 ? C14 P6G 202 A 1 HETATM 15 C C15 P6G . . . D 3 24.808 0.781 -10.823 0.68 24.17 ? C15 P6G 202 A 1 HETATM 16 O O16 P6G . . . D 3 25.042 -0.183 -9.749 0.68 38.37 ? O16 P6G 202 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 16 #