data_3WWR # _model_server_result.job_id y2nMbTR_UNI3Mhy08PYywQ _model_server_result.datetime_utc '2025-07-31 18:05:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wwr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 3WWR # _exptl.entry_id 3WWR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 511.736 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-({[(1R,2S,3R,5Z,7E,14beta,17alpha)-1,3,25-trihydroxy-9,10-secocholesta-5,7,10-trien-2-yl]oxy}methyl)cyclopropanecarbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3WWR _cell.length_a 45.167 _cell.length_b 51.826 _cell.length_c 132.384 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WWR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C32 H49 N O4' _chem_comp.formula_weight 511.736 _chem_comp.id 3AJ _chem_comp.mon_nstd_flag . _chem_comp.name 1-({[(1R,2S,3R,5Z,7E,14beta,17alpha)-1,3,25-trihydroxy-9,10-secocholesta-5,7,10-trien-2-yl]oxy}methyl)cyclopropanecarbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 3AJ sing 1 n n C2 C1 3AJ sing 2 n n C35 C34 3AJ sing 3 n n C3 C4 3AJ sing 4 n n C1 C6 3AJ sing 5 n n C30 C28 3AJ sing 6 n n C30 C31 3AJ sing 7 n n C17 C18 3AJ sing 8 n n C17 C16 3AJ sing 9 n n C10 C6 3AJ sing 10 n n C27 C28 3AJ sing 11 n n C27 O25 3AJ sing 12 n n C28 C31 3AJ sing 13 n n C28 C29 3AJ sing 14 n n C15 C16 3AJ doub 15 z n C15 C14 3AJ sing 16 n n C18 O24 3AJ sing 17 n n C18 C19 3AJ sing 18 n n C16 C21 3AJ sing 19 n n C6 C5 3AJ sing 20 n n C6 C9 3AJ sing 21 n n C34 C36 3AJ sing 22 n n C34 C33 3AJ sing 23 n n C34 O37 3AJ sing 24 n n C4 C14 3AJ doub 25 e n C4 C5 3AJ sing 26 n n C13 C33 3AJ sing 27 n n C13 C12 3AJ sing 28 n n O25 C19 3AJ sing 29 n n C12 C11 3AJ sing 30 n n C11 C9 3AJ sing 31 n n C11 C26 3AJ sing 32 n n C5 C7 3AJ sing 33 n n C19 C20 3AJ sing 34 n n C29 N32 3AJ trip 35 n n C9 C8 3AJ sing 36 n n C21 C22 3AJ doub 37 n n C21 C20 3AJ sing 38 n n C20 O23 3AJ sing 39 n n C7 C8 3AJ sing 40 n n C31 H1 3AJ sing 41 n n C31 H2 3AJ sing 42 n n C30 H3 3AJ sing 43 n n C30 H4 3AJ sing 44 n n C27 H5 3AJ sing 45 n n C27 H6 3AJ sing 46 n n C19 H7 3AJ sing 47 n n C18 H8 3AJ sing 48 n n O24 H9 3AJ sing 49 n n C17 H10 3AJ sing 50 n n C17 H11 3AJ sing 51 n n C20 H12 3AJ sing 52 n n O23 H13 3AJ sing 53 n n C22 H14 3AJ sing 54 n n C22 H15 3AJ sing 55 n n C15 H16 3AJ sing 56 n n C14 H17 3AJ sing 57 n n C3 H18 3AJ sing 58 n n C3 H19 3AJ sing 59 n n C2 H20 3AJ sing 60 n n C2 H21 3AJ sing 61 n n C5 H22 3AJ sing 62 n n C7 H23 3AJ sing 63 n n C7 H24 3AJ sing 64 n n C8 H25 3AJ sing 65 n n C8 H26 3AJ sing 66 n n C9 H27 3AJ sing 67 n n C10 H28 3AJ sing 68 n n C10 H29 3AJ sing 69 n n C10 H30 3AJ sing 70 n n C1 H31 3AJ sing 71 n n C1 H32 3AJ sing 72 n n C11 H33 3AJ sing 73 n n C26 H34 3AJ sing 74 n n C26 H35 3AJ sing 75 n n C26 H36 3AJ sing 76 n n C12 H37 3AJ sing 77 n n C12 H38 3AJ sing 78 n n C13 H39 3AJ sing 79 n n C13 H40 3AJ sing 80 n n C33 H41 3AJ sing 81 n n C33 H42 3AJ sing 82 n n O37 H43 3AJ sing 83 n n C36 H44 3AJ sing 84 n n C36 H45 3AJ sing 85 n n C36 H46 3AJ sing 86 n n C35 H47 3AJ sing 87 n n C35 H48 3AJ sing 88 n n C35 H49 3AJ sing 89 n n # _atom_sites.entry_id 3WWR _atom_sites.fract_transf_matrix[1][1] 0.02214 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019295 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007554 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 3AJ _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id 3AJ _pdbx_nonpoly_scheme.auth_mon_id MOL _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N32 3AJ . . . B 2 13.18 -12.626 -30.333 1 53.12 ? N32 3AJ 501 A 1 HETATM 2 C C29 3AJ . . . B 2 13.755 -12.413 -31.296 1 53.72 ? C29 3AJ 501 A 1 HETATM 3 C C28 3AJ . . . B 2 14.487 -12.151 -32.528 1 54.15 ? C28 3AJ 501 A 1 HETATM 4 C C31 3AJ . . . B 2 15.656 -12.913 -31.924 1 54.04 ? C31 3AJ 501 A 1 HETATM 5 C C30 3AJ . . . B 2 15.174 -13.316 -33.258 1 54.21 ? C30 3AJ 501 A 1 HETATM 6 C C27 3AJ . . . B 2 15.181 -10.793 -32.607 1 54.13 ? C27 3AJ 501 A 1 HETATM 7 O O25 3AJ . . . B 2 14.503 -9.745 -31.925 1 53.54 ? O25 3AJ 501 A 1 HETATM 8 C C19 3AJ . . . B 2 15.423 -8.873 -31.334 1 51.97 ? C19 3AJ 501 A 1 HETATM 9 C C18 3AJ . . . B 2 16.113 -8.137 -32.442 1 51.39 ? C18 3AJ 501 A 1 HETATM 10 O O24 3AJ . . . B 2 17.129 -7.31 -31.933 1 51.55 ? O24 3AJ 501 A 1 HETATM 11 C C17 3AJ . . . B 2 15.195 -7.257 -33.231 1 50.74 ? C17 3AJ 501 A 1 HETATM 12 C C20 3AJ . . . B 2 14.662 -8.013 -30.387 1 51.37 ? C20 3AJ 501 A 1 HETATM 13 O O23 3AJ . . . B 2 13.743 -8.835 -29.711 1 51.38 ? O23 3AJ 501 A 1 HETATM 14 C C21 3AJ . . . B 2 13.886 -7.038 -31.151 1 50.76 ? C21 3AJ 501 A 1 HETATM 15 C C22 3AJ . . . B 2 12.653 -6.775 -30.806 1 50.79 ? C22 3AJ 501 A 1 HETATM 16 C C16 3AJ . . . B 2 14.481 -6.396 -32.276 1 50.2 ? C16 3AJ 501 A 1 HETATM 17 C C15 3AJ . . . B 2 14.386 -5.101 -32.517 1 49.68 ? C15 3AJ 501 A 1 HETATM 18 C C14 3AJ . . . B 2 13.712 -4.164 -31.637 1 49.16 ? C14 3AJ 501 A 1 HETATM 19 C C4 3AJ . . . B 2 13.612 -2.92 -32.084 1 48.14 ? C4 3AJ 501 A 1 HETATM 20 C C3 3AJ . . . B 2 14.197 -2.616 -33.419 1 47.42 ? C3 3AJ 501 A 1 HETATM 21 C C2 3AJ . . . B 2 13.234 -1.737 -34.17 1 47.21 ? C2 3AJ 501 A 1 HETATM 22 C C5 3AJ . . . B 2 12.991 -1.787 -31.346 1 48.04 ? C5 3AJ 501 A 1 HETATM 23 C C7 3AJ . . . B 2 12.287 -2.026 -30.03 1 48.11 ? C7 3AJ 501 A 1 HETATM 24 C C8 3AJ . . . B 2 11.357 -0.825 -29.908 1 47.93 ? C8 3AJ 501 A 1 HETATM 25 C C9 3AJ . . . B 2 11.317 -0.128 -31.265 1 47.48 ? C9 3AJ 501 A 1 HETATM 26 C C6 3AJ . . . B 2 11.978 -1.11 -32.208 1 47.75 ? C6 3AJ 501 A 1 HETATM 27 C C10 3AJ . . . B 2 10.988 -2.075 -32.785 1 47.85 ? C10 3AJ 501 A 1 HETATM 28 C C1 3AJ . . . B 2 12.774 -0.57 -33.334 1 47.53 ? C1 3AJ 501 A 1 HETATM 29 C C11 3AJ . . . B 2 9.927 0.373 -31.648 1 46.84 ? C11 3AJ 501 A 1 HETATM 30 C C26 3AJ . . . B 2 9.49 1.376 -30.625 1 47.35 ? C26 3AJ 501 A 1 HETATM 31 C C12 3AJ . . . B 2 8.826 -0.661 -31.72 1 46 ? C12 3AJ 501 A 1 HETATM 32 C C13 3AJ . . . B 2 7.461 -0.023 -31.939 1 45.31 ? C13 3AJ 501 A 1 HETATM 33 C C33 3AJ . . . B 2 6.369 -1.082 -31.925 1 44.95 ? C33 3AJ 501 A 1 HETATM 34 C C34 3AJ . . . B 2 4.969 -0.565 -32.126 1 44.4 ? C34 3AJ 501 A 1 HETATM 35 O O37 3AJ . . . B 2 4.716 0.35 -31.092 1 44.22 ? O37 3AJ 501 A 1 HETATM 36 C C36 3AJ . . . B 2 3.926 -1.638 -32.02 1 43.92 ? C36 3AJ 501 A 1 HETATM 37 C C35 3AJ . . . B 2 4.856 0.05 -33.49 1 43.9 ? C35 3AJ 501 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 37 #