data_3WYX # _model_server_result.job_id stqHw-vsPErYNYBoqKwgtA _model_server_result.datetime_utc '2024-11-29 02:00:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wyx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":902}' # _entry.id 3WYX # _exptl.entry_id 3WYX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 427.502 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-{[3-(cyanomethoxy)-4-(1-methyl-1H-pyrazol-4-yl)phenyl]amino}-2-(cyclohexylamino)pyridine-3-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3WYX _cell.length_a 70.25 _cell.length_b 105.57 _cell.length_c 113.38 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WYX _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -70.25 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H25 N7 O' _chem_comp.formula_weight 427.502 _chem_comp.id O38 _chem_comp.mon_nstd_flag . _chem_comp.name 6-{[3-(cyanomethoxy)-4-(1-methyl-1H-pyrazol-4-yl)phenyl]amino}-2-(cyclohexylamino)pyridine-3-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 C12 O38 trip 237 n n C12 C11 O38 sing 238 n n C15 C16 O38 sing 239 n n C15 C14 O38 sing 240 n n C17 C16 O38 sing 241 n n C17 C18 O38 sing 242 n n N4 C14 O38 sing 243 n n N4 C13 O38 sing 244 n n C11 C13 O38 doub 245 n y C11 C10 O38 sing 246 n y C14 C19 O38 sing 247 n n C19 C18 O38 sing 248 n n C13 N5 O38 sing 249 n y C10 C9 O38 doub 250 n y N5 C8 O38 doub 251 n y C9 C8 O38 sing 252 n y C8 N2 O38 sing 253 n n N2 C7 O38 sing 254 n n C6 C7 O38 sing 255 n y C6 C5 O38 doub 256 n y C7 C20 O38 doub 257 n y C5 C4 O38 sing 258 n y C20 C21 O38 sing 259 n y C4 C21 O38 doub 260 n y C4 C2 O38 sing 261 n n C1 C2 O38 doub 262 n y C1 N O38 sing 263 n y C21 O O38 sing 264 n n C2 C3 O38 sing 265 n y N C O38 sing 266 n n N N1 O38 sing 267 n y O C22 O38 sing 268 n n C3 N1 O38 doub 269 n y C22 C23 O38 sing 270 n n C23 N6 O38 trip 271 n n C22 H1 O38 sing 272 n n C22 H2 O38 sing 273 n n C1 H3 O38 sing 274 n n C3 H4 O38 sing 275 n n C H5 O38 sing 276 n n C H6 O38 sing 277 n n C H7 O38 sing 278 n n C20 H8 O38 sing 279 n n C6 H9 O38 sing 280 n n C5 H10 O38 sing 281 n n N2 H11 O38 sing 282 n n C10 H12 O38 sing 283 n n C9 H13 O38 sing 284 n n N4 H14 O38 sing 285 n n C14 H15 O38 sing 286 n n C19 H16 O38 sing 287 n n C19 H17 O38 sing 288 n n C18 H18 O38 sing 289 n n C18 H19 O38 sing 290 n n C17 H20 O38 sing 291 n n C17 H21 O38 sing 292 n n C16 H22 O38 sing 293 n n C16 H23 O38 sing 294 n n C15 H24 O38 sing 295 n n C15 H25 O38 sing 296 n n # _atom_sites.entry_id 3WYX _atom_sites.fract_transf_matrix[1][1] 0.014235 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009472 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00882 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 901 806 IOD IOD . C 3 O38 A 1 902 901 O38 O38 . D 4 HOH A 1 1001 801 HOH HOH . D 4 HOH A 2 1002 802 HOH HOH . D 4 HOH A 3 1003 803 HOH HOH . D 4 HOH A 4 1004 804 HOH HOH . D 4 HOH A 5 1005 805 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N6 O38 . . . C 3 -33.2 -20.984 -4.682 1 72.04 ? N6 O38 902 A 1 HETATM 2 C C23 O38 . . . C 3 -33.409 -19.848 -4.809 1 66.46 ? C23 O38 902 A 1 HETATM 3 C C22 O38 . . . C 3 -33.655 -18.404 -4.959 1 63.27 ? C22 O38 902 A 1 HETATM 4 O O O38 . . . C 3 -32.739 -17.858 -5.914 1 61.26 ? O O38 902 A 1 HETATM 5 C C21 O38 . . . C 3 -33.211 -17.604 -7.177 1 64.43 ? C21 O38 902 A 1 HETATM 6 C C4 O38 . . . C 3 -33.257 -16.325 -7.715 1 65.18 ? C4 O38 902 A 1 HETATM 7 C C2 O38 . . . C 3 -32.792 -15.217 -6.993 1 66.33 ? C2 O38 902 A 1 HETATM 8 C C1 O38 . . . C 3 -32.779 -13.897 -7.44 1 70.25 ? C1 O38 902 A 1 HETATM 9 C C3 O38 . . . C 3 -32.242 -15.22 -5.704 1 68.96 ? C3 O38 902 A 1 HETATM 10 N N1 O38 . . . C 3 -31.904 -13.957 -5.361 1 72.48 ? N1 O38 902 A 1 HETATM 11 N N O38 . . . C 3 -32.251 -13.157 -6.458 1 74.13 ? N O38 902 A 1 HETATM 12 C C O38 . . . C 3 -31.984 -11.699 -6.313 1 69.05 ? C O38 902 A 1 HETATM 13 C C20 O38 . . . C 3 -33.678 -18.693 -7.907 1 61.63 ? C20 O38 902 A 1 HETATM 14 C C7 O38 . . . C 3 -34.195 -18.562 -9.173 1 58.79 ? C7 O38 902 A 1 HETATM 15 C C6 O38 . . . C 3 -34.241 -17.285 -9.723 1 60.32 ? C6 O38 902 A 1 HETATM 16 C C5 O38 . . . C 3 -33.774 -16.187 -9.009 1 64.3 ? C5 O38 902 A 1 HETATM 17 N N2 O38 . . . C 3 -34.668 -19.7 -9.753 1 61.1 ? N2 O38 902 A 1 HETATM 18 C C8 O38 . . . C 3 -35.506 -19.759 -10.833 1 60.19 ? C8 O38 902 A 1 HETATM 19 N N5 O38 . . . C 3 -35.896 -18.65 -11.499 1 52.69 ? N5 O38 902 A 1 HETATM 20 C C13 O38 . . . C 3 -36.71 -18.714 -12.56 1 53.69 ? C13 O38 902 A 1 HETATM 21 C C11 O38 . . . C 3 -37.194 -19.953 -13.014 1 54.95 ? C11 O38 902 A 1 HETATM 22 C C12 O38 . . . C 3 -37.992 -20.035 -14.022 1 52.98 ? C12 O38 902 A 1 HETATM 23 N N3 O38 . . . C 3 -38.778 -20.072 -14.881 1 53.44 ? N3 O38 902 A 1 HETATM 24 C C10 O38 . . . C 3 -36.815 -21.114 -12.359 1 55.77 ? C10 O38 902 A 1 HETATM 25 C C9 O38 . . . C 3 -35.972 -21.011 -11.257 1 58.47 ? C9 O38 902 A 1 HETATM 26 N N4 O38 . . . C 3 -37.066 -17.557 -13.166 1 55.68 ? N4 O38 902 A 1 HETATM 27 C C14 O38 . . . C 3 -36.716 -16.228 -12.68 1 54.57 ? C14 O38 902 A 1 HETATM 28 C C19 O38 . . . C 3 -37.995 -15.391 -12.585 1 54.13 ? C19 O38 902 A 1 HETATM 29 C C18 O38 . . . C 3 -37.746 -13.892 -12.455 1 54.66 ? C18 O38 902 A 1 HETATM 30 C C17 O38 . . . C 3 -36.737 -13.379 -13.474 1 53.65 ? C17 O38 902 A 1 HETATM 31 C C16 O38 . . . C 3 -35.422 -14.135 -13.364 1 52.18 ? C16 O38 902 A 1 HETATM 32 C C15 O38 . . . C 3 -35.673 -15.614 -13.618 1 54.8 ? C15 O38 902 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #