data_3X03
#
_model_server_result.job_id            NohSQL5LxaAfV54Tcyz03g 
_model_server_result.datetime_utc      '2024-11-14 07:10:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3x03 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    3X03 
#
_exptl.entry_id    3X03 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              506.196 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3X03 
_cell.length_a            108.637 
_cell.length_b            182.98 
_cell.length_c            105.999 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3X03 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
_chem_comp.formula           'C10 H17 N6 O12 P3' 
_chem_comp.formula_weight    506.196 
_chem_comp.id                ANP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ANP doub 13 n n 
PG O2G ANP sing 14 n n 
PG O3G ANP sing 15 n n 
PG N3B ANP sing 16 n n 
O2G HOG2 ANP sing 17 n n 
O3G HOG3 ANP sing 18 n n 
PB O1B ANP doub 19 n n 
PB O2B ANP sing 20 n n 
PB N3B ANP sing 21 n n 
PB O3A ANP sing 22 n n 
O2B HOB2 ANP sing 23 n n 
N3B HNB1 ANP sing 24 n n 
PA O1A ANP doub 25 n n 
PA O2A ANP sing 26 n n 
PA O3A ANP sing 27 n n 
PA O5' ANP sing 28 n n 
O2A HOA2 ANP sing 29 n n 
O5' C5' ANP sing 30 n n 
C5' C4' ANP sing 31 n n 
C5' "H5'1" ANP sing 32 n n 
C5' "H5'2" ANP sing 33 n n 
C4' O4' ANP sing 34 n n 
C4' C3' ANP sing 35 n n 
C4' H4' ANP sing 36 n n 
O4' C1' ANP sing 37 n n 
C3' O3' ANP sing 38 n n 
C3' C2' ANP sing 39 n n 
C3' H3' ANP sing 40 n n 
O3' HO3' ANP sing 41 n n 
C2' O2' ANP sing 42 n n 
C2' C1' ANP sing 43 n n 
C2' H2' ANP sing 44 n n 
O2' HO2' ANP sing 45 n n 
C1' N9 ANP sing 46 n n 
C1' H1' ANP sing 47 n n 
N9 C8 ANP sing 48 n y 
N9 C4 ANP sing 49 n y 
C8 N7 ANP doub 50 n y 
C8 H8 ANP sing 51 n n 
N7 C5 ANP sing 52 n y 
C5 C6 ANP sing 53 n y 
C5 C4 ANP doub 54 n y 
C6 N6 ANP sing 55 n n 
C6 N1 ANP doub 56 n y 
N6 HN61 ANP sing 57 n n 
N6 HN62 ANP sing 58 n n 
N1 C2 ANP sing 59 n y 
C2 N3 ANP doub 60 n y 
C2 H2 ANP sing 61 n n 
N3 C4 ANP sing 62 n y 
#
_atom_sites.entry_id                     3X03 
_atom_sites.fract_transf_matrix[1][1]    0.009205 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005465 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009434 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ANP A 1 501 501 ANP ANP . 
D 2 ANP A 1 502 502 ANP ANP . 
E 2 ANP B 1 501 501 ANP ANP . 
F 3 HOH A 1 601 601 HOH HOH . 
F 3 HOH A 2 602 602 HOH HOH . 
F 3 HOH A 3 603 603 HOH HOH . 
F 3 HOH A 4 604 604 HOH HOH . 
F 3 HOH A 5 605 605 HOH HOH . 
F 3 HOH A 6 606 606 HOH HOH . 
F 3 HOH A 7 607 607 HOH HOH . 
F 3 HOH A 8 608 608 HOH HOH . 
F 3 HOH A 9 609 609 HOH HOH . 
F 3 HOH A 10 610 610 HOH HOH . 
F 3 HOH A 11 611 611 HOH HOH . 
G 3 HOH B 1 601 601 HOH HOH . 
G 3 HOH B 2 602 602 HOH HOH . 
G 3 HOH B 3 603 603 HOH HOH . 
G 3 HOH B 4 604 604 HOH HOH . 
G 3 HOH B 5 605 605 HOH HOH . 
G 3 HOH B 6 606 606 HOH HOH . 
G 3 HOH B 7 607 607 HOH HOH . 
G 3 HOH B 8 608 608 HOH HOH . 
G 3 HOH B 9 609 609 HOH HOH . 
G 3 HOH B 10 610 610 HOH HOH . 
G 3 HOH B 11 611 611 HOH HOH . 
G 3 HOH B 12 612 612 HOH HOH . 
G 3 HOH B 13 613 613 HOH HOH . 
G 3 HOH B 14 614 614 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ANP . . . D 2 55.017 47.093 -22.314 1 177.04 ? PG ANP 502 A 1 
HETATM 2 O O1G ANP . . . D 2 55.818 48.193 -21.658 1 100.83 ? O1G ANP 502 A 1 
HETATM 3 O O2G ANP . . . D 2 55.439 46.97 -23.829 1 124.12 ? O2G ANP 502 A 1 
HETATM 4 O O3G ANP . . . D 2 55.346 45.746 -21.522 1 72.4 ? O3G ANP 502 A 1 
HETATM 5 P PB ANP . . . D 2 52.826 48.888 -22.912 1 161 ? PB ANP 502 A 1 
HETATM 6 O O1B ANP . . . D 2 53.419 50.017 -22.038 1 81.75 ? O1B ANP 502 A 1 
HETATM 7 O O2B ANP . . . D 2 52.911 49.338 -24.445 1 72.22 ? O2B ANP 502 A 1 
HETATM 8 N N3B ANP . . . D 2 53.36 47.395 -22.291 1 59.06 ? N3B ANP 502 A 1 
HETATM 9 P PA ANP . . . D 2 50.28 49.529 -23.792 1 228.94 ? PA ANP 502 A 1 
HETATM 10 O O1A ANP . . . D 2 50.128 50.678 -22.691 1 81.15 ? O1A ANP 502 A 1 
HETATM 11 O O2A ANP . . . D 2 50.972 50.915 -24.562 1 63.39 ? O2A ANP 502 A 1 
HETATM 12 O O3A ANP . . . D 2 51.306 48.877 -22.639 1 87.48 ? O3A ANP 502 A 1 
HETATM 13 O O5' ANP . . . D 2 48.691 49.184 -23.194 1 58.76 ? O5' ANP 502 A 1 
HETATM 14 C C5' ANP . . . D 2 48.48 47.792 -22.906 1 41.94 ? C5' ANP 502 A 1 
HETATM 15 C C4' ANP . . . D 2 48.371 47.235 -24.34 1 54.86 ? C4' ANP 502 A 1 
HETATM 16 O O4' ANP . . . D 2 47.071 46.729 -24.674 1 97.73 ? O4' ANP 502 A 1 
HETATM 17 C C3' ANP . . . D 2 49.102 47.571 -25.724 1 87 ? C3' ANP 502 A 1 
HETATM 18 O O3' ANP . . . D 2 50.449 47.515 -25.84 1 119.5 ? O3' ANP 502 A 1 
HETATM 19 C C2' ANP . . . D 2 48.597 46.488 -26.52 1 51.29 ? C2' ANP 502 A 1 
HETATM 20 O O2' ANP . . . D 2 49.199 45.266 -26.308 1 59.56 ? O2' ANP 502 A 1 
HETATM 21 C C1' ANP . . . D 2 47.262 46.187 -25.971 1 94.14 ? C1' ANP 502 A 1 
HETATM 22 N N9 ANP . . . D 2 46.261 46.763 -26.758 1 106.33 ? N9 ANP 502 A 1 
HETATM 23 C C8 ANP . . . D 2 46.125 48.059 -27.039 1 106.4 ? C8 ANP 502 A 1 
HETATM 24 N N7 ANP . . . D 2 45.024 48.175 -27.746 1 106.1 ? N7 ANP 502 A 1 
HETATM 25 C C5 ANP . . . D 2 44.461 46.963 -27.874 1 96.17 ? C5 ANP 502 A 1 
HETATM 26 C C6 ANP . . . D 2 43.323 46.524 -28.483 1 82.44 ? C6 ANP 502 A 1 
HETATM 27 N N6 ANP . . . D 2 42.557 47.567 -29.147 1 70.94 ? N6 ANP 502 A 1 
HETATM 28 N N1 ANP . . . D 2 43.031 45.195 -28.424 1 92 ? N1 ANP 502 A 1 
HETATM 29 C C2 ANP . . . D 2 43.799 44.259 -27.78 1 98.75 ? C2 ANP 502 A 1 
HETATM 30 N N3 ANP . . . D 2 44.934 44.675 -27.171 1 108.46 ? N3 ANP 502 A 1 
HETATM 31 C C4 ANP . . . D 2 45.241 46.006 -27.233 1 104.69 ? C4 ANP 502 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           31 
#