data_3X0K # _model_server_result.job_id MCxSdKJijY7xA5G5SePh8w _model_server_result.datetime_utc '2024-10-19 03:58:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3x0k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 3X0K # _exptl.entry_id 3X0K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3X0K _cell.length_a 49.645 _cell.length_b 49.645 _cell.length_c 118.673 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3X0K _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 178 n n C1 C2 GOL sing 179 n n C1 H11 GOL sing 180 n n C1 H12 GOL sing 181 n n O1 HO1 GOL sing 182 n n C2 O2 GOL sing 183 n n C2 C3 GOL sing 184 n n C2 H2 GOL sing 185 n n O2 HO2 GOL sing 186 n n C3 O3 GOL sing 187 n n C3 H31 GOL sing 188 n n C3 H32 GOL sing 189 n n O3 HO3 GOL sing 190 n n # _atom_sites.entry_id 3X0K _atom_sites.fract_transf_matrix[1][1] 0.020143 _atom_sites.fract_transf_matrix[1][2] 0.01163 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023259 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008427 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AR6 A 1 201 1 AR6 APR . C 3 GOL A 1 202 1 GOL GOL . D 4 HOH A 1 301 1 HOH HOH . D 4 HOH A 2 302 2 HOH HOH . D 4 HOH A 3 303 3 HOH HOH . D 4 HOH A 4 304 4 HOH HOH . D 4 HOH A 5 305 5 HOH HOH . D 4 HOH A 6 306 6 HOH HOH . D 4 HOH A 7 307 7 HOH HOH . D 4 HOH A 8 308 8 HOH HOH . D 4 HOH A 9 309 9 HOH HOH . D 4 HOH A 10 310 10 HOH HOH . D 4 HOH A 11 311 11 HOH HOH . D 4 HOH A 12 312 12 HOH HOH . D 4 HOH A 13 313 13 HOH HOH . D 4 HOH A 14 314 14 HOH HOH . D 4 HOH A 15 315 15 HOH HOH . D 4 HOH A 16 316 16 HOH HOH . D 4 HOH A 17 317 17 HOH HOH . D 4 HOH A 18 318 18 HOH HOH . D 4 HOH A 19 319 19 HOH HOH . D 4 HOH A 20 320 20 HOH HOH . D 4 HOH A 21 321 21 HOH HOH . D 4 HOH A 22 322 22 HOH HOH . D 4 HOH A 23 323 23 HOH HOH . D 4 HOH A 24 324 24 HOH HOH . D 4 HOH A 25 325 25 HOH HOH . D 4 HOH A 26 326 26 HOH HOH . D 4 HOH A 27 327 27 HOH HOH . D 4 HOH A 28 328 28 HOH HOH . D 4 HOH A 29 329 29 HOH HOH . D 4 HOH A 30 330 30 HOH HOH . D 4 HOH A 31 331 31 HOH HOH . D 4 HOH A 32 332 32 HOH HOH . D 4 HOH A 33 333 33 HOH HOH . D 4 HOH A 34 334 34 HOH HOH . D 4 HOH A 35 335 35 HOH HOH . D 4 HOH A 36 336 36 HOH HOH . D 4 HOH A 37 337 37 HOH HOH . D 4 HOH A 38 338 38 HOH HOH . D 4 HOH A 39 339 39 HOH HOH . D 4 HOH A 40 340 40 HOH HOH . D 4 HOH A 41 341 41 HOH HOH . D 4 HOH A 42 342 42 HOH HOH . D 4 HOH A 43 343 43 HOH HOH . D 4 HOH A 44 344 44 HOH HOH . D 4 HOH A 45 345 45 HOH HOH . D 4 HOH A 46 346 46 HOH HOH . D 4 HOH A 47 347 47 HOH HOH . D 4 HOH A 48 348 48 HOH HOH . D 4 HOH A 49 349 49 HOH HOH . D 4 HOH A 50 350 50 HOH HOH . D 4 HOH A 51 351 52 HOH HOH . D 4 HOH A 52 352 53 HOH HOH . D 4 HOH A 53 353 54 HOH HOH . D 4 HOH A 54 354 55 HOH HOH . D 4 HOH A 55 355 56 HOH HOH . D 4 HOH A 56 356 57 HOH HOH . D 4 HOH A 57 357 58 HOH HOH . D 4 HOH A 58 358 59 HOH HOH . D 4 HOH A 59 359 60 HOH HOH . D 4 HOH A 60 360 61 HOH HOH . D 4 HOH A 61 361 64 HOH HOH . D 4 HOH A 62 362 65 HOH HOH . D 4 HOH A 63 363 67 HOH HOH . D 4 HOH A 64 364 68 HOH HOH . D 4 HOH A 65 365 70 HOH HOH . D 4 HOH A 66 366 72 HOH HOH . D 4 HOH A 67 367 73 HOH HOH . D 4 HOH A 68 368 75 HOH HOH . D 4 HOH A 69 369 76 HOH HOH . D 4 HOH A 70 370 80 HOH HOH . D 4 HOH A 71 371 81 HOH HOH . D 4 HOH A 72 372 82 HOH HOH . D 4 HOH A 73 373 83 HOH HOH . D 4 HOH A 74 374 84 HOH HOH . D 4 HOH A 75 375 85 HOH HOH . D 4 HOH A 76 376 86 HOH HOH . D 4 HOH A 77 377 88 HOH HOH . D 4 HOH A 78 378 89 HOH HOH . D 4 HOH A 79 379 90 HOH HOH . D 4 HOH A 80 380 93 HOH HOH . D 4 HOH A 81 381 96 HOH HOH . D 4 HOH A 82 382 97 HOH HOH . D 4 HOH A 83 383 98 HOH HOH . D 4 HOH A 84 384 99 HOH HOH . D 4 HOH A 85 385 101 HOH HOH . D 4 HOH A 86 386 102 HOH HOH . D 4 HOH A 87 387 104 HOH HOH . D 4 HOH A 88 388 105 HOH HOH . D 4 HOH A 89 389 106 HOH HOH . D 4 HOH A 90 390 107 HOH HOH . D 4 HOH A 91 391 108 HOH HOH . D 4 HOH A 92 392 111 HOH HOH . D 4 HOH A 93 393 112 HOH HOH . D 4 HOH A 94 394 114 HOH HOH . D 4 HOH A 95 395 115 HOH HOH . D 4 HOH A 96 396 116 HOH HOH . D 4 HOH A 97 397 117 HOH HOH . D 4 HOH A 98 398 118 HOH HOH . D 4 HOH A 99 399 120 HOH HOH . D 4 HOH A 100 400 122 HOH HOH . D 4 HOH A 101 401 123 HOH HOH . D 4 HOH A 102 402 127 HOH HOH . D 4 HOH A 103 403 130 HOH HOH . D 4 HOH A 104 404 131 HOH HOH . D 4 HOH A 105 405 132 HOH HOH . D 4 HOH A 106 406 133 HOH HOH . D 4 HOH A 107 407 135 HOH HOH . D 4 HOH A 108 408 136 HOH HOH . D 4 HOH A 109 409 137 HOH HOH . D 4 HOH A 110 410 138 HOH HOH . D 4 HOH A 111 411 139 HOH HOH . D 4 HOH A 112 412 140 HOH HOH . D 4 HOH A 113 413 141 HOH HOH . D 4 HOH A 114 414 143 HOH HOH . D 4 HOH A 115 415 148 HOH HOH . D 4 HOH A 116 416 149 HOH HOH . D 4 HOH A 117 417 155 HOH HOH . D 4 HOH A 118 418 157 HOH HOH . D 4 HOH A 119 419 158 HOH HOH . D 4 HOH A 120 420 159 HOH HOH . D 4 HOH A 121 421 160 HOH HOH . D 4 HOH A 122 422 166 HOH HOH . D 4 HOH A 123 423 167 HOH HOH . D 4 HOH A 124 424 168 HOH HOH . D 4 HOH A 125 425 169 HOH HOH . D 4 HOH A 126 426 170 HOH HOH . D 4 HOH A 127 427 171 HOH HOH . D 4 HOH A 128 428 172 HOH HOH . D 4 HOH A 129 429 173 HOH HOH . D 4 HOH A 130 430 174 HOH HOH . D 4 HOH A 131 431 175 HOH HOH . D 4 HOH A 132 432 176 HOH HOH . D 4 HOH A 133 433 177 HOH HOH . D 4 HOH A 134 434 178 HOH HOH . D 4 HOH A 135 435 179 HOH HOH . D 4 HOH A 136 436 180 HOH HOH . D 4 HOH A 137 437 181 HOH HOH . D 4 HOH A 138 438 182 HOH HOH . D 4 HOH A 139 439 183 HOH HOH . D 4 HOH A 140 440 184 HOH HOH . D 4 HOH A 141 441 185 HOH HOH . D 4 HOH A 142 442 186 HOH HOH . D 4 HOH A 143 443 187 HOH HOH . D 4 HOH A 144 444 188 HOH HOH . D 4 HOH A 145 445 189 HOH HOH . D 4 HOH A 146 446 190 HOH HOH . D 4 HOH A 147 447 191 HOH HOH . D 4 HOH A 148 448 192 HOH HOH . D 4 HOH A 149 449 193 HOH HOH . D 4 HOH A 150 450 194 HOH HOH . D 4 HOH A 151 451 195 HOH HOH . D 4 HOH A 152 452 196 HOH HOH . D 4 HOH A 153 453 197 HOH HOH . D 4 HOH A 154 454 198 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -9.216 -0.632 -6.904 0.75 27.79 ? C1 GOL 202 A 1 HETATM 2 O O1 GOL . . . C 3 -9.061 -0.356 -8.27 0.75 48.92 ? O1 GOL 202 A 1 HETATM 3 C C2 GOL . . . C 3 -10.601 -1.215 -6.663 0.75 23.46 ? C2 GOL 202 A 1 HETATM 4 O O2 GOL . . . C 3 -11.616 -0.853 -7.569 0.75 21.29 ? O2 GOL 202 A 1 HETATM 5 C C3 GOL . . . C 3 -11.084 -1.12 -5.221 0.75 21.53 ? C3 GOL 202 A 1 HETATM 6 O O3 GOL . . . C 3 -12.204 -1.963 -5.077 0.75 18.84 ? O3 GOL 202 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #