data_3ZEB # _model_server_result.job_id MfmTs4DgCJ6-lWV6wcuPbQ _model_server_result.datetime_utc '2025-02-27 13:05:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zeb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 3ZEB # _exptl.entry_id 3ZEB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 283.322 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-phenylethyl 2-(4-azanyl-2-methanoyl-phenyl)ethanoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ZEB _cell.length_a 111.109 _cell.length_b 111.109 _cell.length_c 126.067 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZEB _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A ND1 HIS 59 A HIS 150 1_555 B C7 SV1 . A SV1 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.502 ? covale ? covale2 A OG SER 110 A SER 201 1_555 B C SV1 . A SV1 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.479 ? # _chem_comp.formula 'C17 H17 N O3' _chem_comp.formula_weight 283.322 _chem_comp.id SV1 _chem_comp.mon_nstd_flag . _chem_comp.name '2-phenylethyl 2-(4-azanyl-2-methanoyl-phenyl)ethanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C8 SV1 doub 341 n n C8 C7 SV1 sing 342 n n C8 O2 SV1 sing 343 n n C7 C6 SV1 sing 344 n n C6 C5 SV1 sing 345 n y C6 C1 SV1 doub 346 n y C5 C4 SV1 doub 347 n y C4 C3 SV1 sing 348 n y C3 N SV1 sing 349 n n C3 C2 SV1 doub 350 n y C2 C1 SV1 sing 351 n y C1 C SV1 sing 352 n n C O SV1 doub 353 n n O2 C9 SV1 sing 354 n n C9 C10 SV1 sing 355 n n C10 C11 SV1 sing 356 n n C11 C16 SV1 sing 357 n y C11 C12 SV1 doub 358 n y C16 C15 SV1 doub 359 n y C15 C14 SV1 sing 360 n y C14 C13 SV1 doub 361 n y C13 C12 SV1 sing 362 n y C H SV1 sing 363 n n C7 H71 SV1 sing 364 n n C7 H72 SV1 sing 365 n n C5 H5 SV1 sing 366 n n C4 H4 SV1 sing 367 n n N HN1 SV1 sing 368 n n N HN2 SV1 sing 369 n n C2 H2 SV1 sing 370 n n C9 H91C SV1 sing 371 n n C9 H92C SV1 sing 372 n n C10 H101 SV1 sing 373 n n C10 H102 SV1 sing 374 n n C16 H16 SV1 sing 375 n n C12 H12 SV1 sing 376 n n C15 H15 SV1 sing 377 n n C14 H14 SV1 sing 378 n n C13 H13 SV1 sing 379 n n # _atom_sites.entry_id 3ZEB _atom_sites.fract_transf_matrix[1][1] 0.009 _atom_sites.fract_transf_matrix[1][2] 0.005196 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010393 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007932 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SV1 A 1 401 401 SV1 SV1 . C 3 CL A 1 402 402 CL CL . D 4 BNG A 1 403 403 BNG BNG . E 4 BNG A 1 404 404 BNG BNG . F 4 BNG A 1 405 405 BNG BNG . G 4 BNG A 1 406 406 BNG BNG . H 4 BNG A 1 407 407 BNG BNG . I 5 HOH A 1 2001 2001 HOH HOH . I 5 HOH A 2 2002 2002 HOH HOH . I 5 HOH A 3 2003 2003 HOH HOH . I 5 HOH A 4 2004 2004 HOH HOH . I 5 HOH A 5 2005 2005 HOH HOH . I 5 HOH A 6 2006 2006 HOH HOH . I 5 HOH A 7 2007 2007 HOH HOH . I 5 HOH A 8 2008 2008 HOH HOH . I 5 HOH A 9 2009 2009 HOH HOH . I 5 HOH A 10 2010 2010 HOH HOH . I 5 HOH A 11 2011 2011 HOH HOH . I 5 HOH A 12 2012 2012 HOH HOH . I 5 HOH A 13 2013 2013 HOH HOH . I 5 HOH A 14 2014 2014 HOH HOH . I 5 HOH A 15 2015 2015 HOH HOH . I 5 HOH A 16 2016 2016 HOH HOH . I 5 HOH A 17 2017 2017 HOH HOH . I 5 HOH A 18 2018 2018 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 SV1 . . . B 2 8.732 -4.676 48.433 1 57.78 ? O1 SV1 401 A 1 HETATM 2 C C8 SV1 . . . B 2 8.957 -4.869 49.605 1 59.14 ? C8 SV1 401 A 1 HETATM 3 C C7 SV1 . . . B 2 10.131 -5.643 50.145 1 58.42 ? C7 SV1 401 A 1 HETATM 4 C C6 SV1 . . . B 2 11.388 -4.811 50.104 1 60.04 ? C6 SV1 401 A 1 HETATM 5 C C5 SV1 . . . B 2 11.264 -3.419 50.175 1 59.44 ? C5 SV1 401 A 1 HETATM 6 C C4 SV1 . . . B 2 12.332 -2.573 49.95 1 59.55 ? C4 SV1 401 A 1 HETATM 7 C C3 SV1 . . . B 2 13.596 -3.093 49.677 1 58.72 ? C3 SV1 401 A 1 HETATM 8 N N SV1 . . . B 2 14.671 -2.264 49.463 1 54.83 ? N SV1 401 A 1 HETATM 9 C C2 SV1 . . . B 2 13.743 -4.479 49.649 1 55.33 ? C2 SV1 401 A 1 HETATM 10 C C1 SV1 . . . B 2 12.672 -5.353 49.867 1 58.84 ? C1 SV1 401 A 1 HETATM 11 C C SV1 . . . B 2 12.969 -6.832 49.772 1 61.02 ? C SV1 401 A 1 HETATM 12 O O SV1 . . . B 2 12.154 -7.705 49.985 1 60.8 ? O SV1 401 A 1 HETATM 13 O O2 SV1 . . . B 2 8.201 -4.379 50.602 1 57.52 ? O2 SV1 401 A 1 HETATM 14 C C9 SV1 . . . B 2 7.113 -3.472 50.265 1 61.3 ? C9 SV1 401 A 1 HETATM 15 C C10 SV1 . . . B 2 7.614 -2.046 50.338 1 63.51 ? C10 SV1 401 A 1 HETATM 16 C C11 SV1 . . . B 2 6.551 -1.009 50.053 1 63.46 ? C11 SV1 401 A 1 HETATM 17 C C16 SV1 . . . B 2 6.122 -0.767 48.755 1 64.5 ? C16 SV1 401 A 1 HETATM 18 C C15 SV1 . . . B 2 5.15 0.187 48.494 1 63.31 ? C15 SV1 401 A 1 HETATM 19 C C14 SV1 . . . B 2 4.598 0.915 49.525 1 59.58 ? C14 SV1 401 A 1 HETATM 20 C C13 SV1 . . . B 2 5.013 0.687 50.817 1 62.51 ? C13 SV1 401 A 1 HETATM 21 C C12 SV1 . . . B 2 5.983 -0.269 51.081 1 65.15 ? C12 SV1 401 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 365 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #