data_3ZPR # _model_server_result.job_id 7a3AWocZnvh9185ZZz1mfA _model_server_result.datetime_utc '2024-11-21 14:49:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zpr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":500}' # _entry.id 3ZPR # _exptl.entry_id 3ZPR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 227.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-METHYL-2-(PIPERAZIN-1-YL) QUINOLINE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.2 _cell.angle_gamma 90 _cell.entry_id 3ZPR _cell.length_a 89.968 _cell.length_b 60.812 _cell.length_c 101.178 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZPR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,U 1 1 B,K,L,M,N,O,P,Q,R,S,T,V 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 84 A CYS 114 1_555 A SG CYS 169 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 A SG CYS 162 A CYS 192 1_555 A SG CYS 168 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? disulf ? disulf3 B SG CYS 84 B CYS 114 1_555 B SG CYS 169 B CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 162 B CYS 192 1_555 B SG CYS 168 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc1 C NA NA . A NA 1 1_555 A OD1 ASP 57 A ASP 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc2 C NA NA . A NA 1 1_555 A OG SER 98 A SER 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc3 C NA NA . A NA 1 1_555 U O HOH . A HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc4 C NA NA . A NA 1 1_555 U O HOH . A HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc5 C NA NA . A NA 1 1_555 U O HOH . A HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc6 D NA NA . A NA 2 1_555 A O CYS 162 A CYS 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc7 D NA NA . A NA 2 1_555 A O ASP 165 A ASP 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc8 D NA NA . A NA 2 1_555 A O CYS 168 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc9 D NA NA . A NA 2 1_555 U O HOH . A HOH 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc10 K NA NA . B NA 1 1_555 B OD1 ASP 57 B ASP 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc11 K NA NA . B NA 1 1_555 B OG SER 98 B SER 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc12 K NA NA . B NA 1 1_555 V O HOH . B HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc13 K NA NA . B NA 1 1_555 V O HOH . B HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc14 L NA NA . B NA 2 1_555 B O CYS 162 B CYS 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc15 L NA NA . B NA 2 1_555 B O ASP 165 B ASP 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc16 L NA NA . B NA 2 1_555 B O CYS 168 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc17 L NA NA . B NA 2 1_555 V O HOH . B HOH 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? # _chem_comp.formula 'C14 H17 N3' _chem_comp.formula_weight 227.305 _chem_comp.id 3WC _chem_comp.mon_nstd_flag . _chem_comp.name '4-METHYL-2-(PIPERAZIN-1-YL) QUINOLINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C5 3WC sing 63 n y C4 C11 3WC doub 64 n y C5 C6 3WC sing 65 n n C5 C2 3WC doub 66 n y C8 C10 3WC sing 67 n n C8 N10 3WC sing 68 n n C10 N12 3WC sing 69 n n N12 C13 3WC sing 70 n n C13 C15 3WC sing 71 n n C15 N10 3WC sing 72 n n C11 N10 3WC sing 73 n n C11 N11 3WC sing 74 n y C20 C28 3WC doub 75 n y C20 C2 3WC sing 76 n y C22 C24 3WC sing 77 n y C22 N11 3WC doub 78 n y C22 C2 3WC sing 79 n y C24 C26 3WC doub 80 n y C26 C28 3WC sing 81 n y C4 H4 3WC sing 82 n n C6 H61C 3WC sing 83 n n C6 H62C 3WC sing 84 n n C6 H63C 3WC sing 85 n n C8 H81C 3WC sing 86 n n C8 H82C 3WC sing 87 n n C10 H101 3WC sing 88 n n C10 H102 3WC sing 89 n n N12 H12 3WC sing 90 n n C13 H131 3WC sing 91 n n C13 H132 3WC sing 92 n n C15 H151 3WC sing 93 n n C15 H152 3WC sing 94 n n C20 H20 3WC sing 95 n n C28 H28 3WC sing 96 n n C24 H24 3WC sing 97 n n C26 H26 3WC sing 98 n n # _atom_sites.entry_id 3ZPR _atom_sites.fract_transf_matrix[1][1] 0.011115 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003871 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016444 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010466 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 1 1 NA NA . D 2 NA A 1 2 2 NA NA . E 3 Y01 A 1 401 401 Y01 Y01 . F 3 Y01 A 1 402 402 Y01 Y01 . G 4 3WC A 1 500 500 3WC 3WC . H 5 2CV A 1 501 501 2CV 2CV . I 5 2CV A 1 502 502 2CV 2CV . J 5 2CV A 1 503 503 2CV 2CV . K 2 NA B 1 1 1 NA NA . L 2 NA B 1 2 2 NA NA . M 3 Y01 B 1 401 401 Y01 Y01 . N 3 Y01 B 1 402 402 Y01 Y01 . O 4 3WC B 1 500 500 3WC 3WC . P 5 2CV B 1 501 501 2CV 2CV . Q 5 2CV B 1 502 502 2CV 2CV . R 5 2CV B 1 503 503 2CV 2CV . S 5 2CV B 1 505 505 2CV 2CV . T 5 2CV B 1 506 506 2CV 2CV . U 6 HOH A 1 2001 2001 HOH HOH . U 6 HOH A 2 2002 2002 HOH HOH . U 6 HOH A 3 2003 2003 HOH HOH . U 6 HOH A 4 2004 2004 HOH HOH . U 6 HOH A 5 2005 2005 HOH HOH . U 6 HOH A 6 2006 2006 HOH HOH . U 6 HOH A 7 2007 2007 HOH HOH . U 6 HOH A 8 2008 2008 HOH HOH . U 6 HOH A 9 2009 2009 HOH HOH . U 6 HOH A 10 2010 2010 HOH HOH . U 6 HOH A 11 2011 2011 HOH HOH . U 6 HOH A 12 2012 2012 HOH HOH . U 6 HOH A 13 2013 2013 HOH HOH . U 6 HOH A 14 2014 2014 HOH HOH . U 6 HOH A 15 2015 2015 HOH HOH . U 6 HOH A 16 2016 2016 HOH HOH . U 6 HOH A 17 2017 2017 HOH HOH . U 6 HOH A 18 2018 2018 HOH HOH . V 6 HOH B 1 2001 2001 HOH HOH . V 6 HOH B 2 2002 2002 HOH HOH . V 6 HOH B 3 2003 2003 HOH HOH . V 6 HOH B 4 2004 2004 HOH HOH . V 6 HOH B 5 2005 2005 HOH HOH . V 6 HOH B 6 2006 2006 HOH HOH . V 6 HOH B 7 2007 2007 HOH HOH . V 6 HOH B 8 2008 2008 HOH HOH . V 6 HOH B 9 2009 2009 HOH HOH . V 6 HOH B 10 2010 2010 HOH HOH . V 6 HOH B 11 2011 2011 HOH HOH . V 6 HOH B 12 2012 2012 HOH HOH . V 6 HOH B 13 2013 2013 HOH HOH . V 6 HOH B 14 2014 2014 HOH HOH . V 6 HOH B 15 2015 2015 HOH HOH . V 6 HOH B 16 2016 2016 HOH HOH . V 6 HOH B 17 2017 2017 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 3WC . . . G 4 -20.884 -11.604 25.098 1 44.44 ? C4 3WC 500 A 1 HETATM 2 C C5 3WC . . . G 4 -19.767 -11.541 25.918 1 47.15 ? C5 3WC 500 A 1 HETATM 3 C C6 3WC . . . G 4 -18.657 -10.794 25.511 1 43.89 ? C6 3WC 500 A 1 HETATM 4 C C8 3WC . . . G 4 -23.9 -13.681 24.788 1 47.28 ? C8 3WC 500 A 1 HETATM 5 C C10 3WC . . . G 4 -25.302 -13.208 24.97 1 48.59 ? C10 3WC 500 A 1 HETATM 6 N N12 3WC . . . G 4 -25.689 -12.359 23.823 1 49.26 ? N12 3WC 500 A 1 HETATM 7 C C13 3WC . . . G 4 -24.986 -11.054 23.868 1 49.42 ? C13 3WC 500 A 1 HETATM 8 C C15 3WC . . . G 4 -23.484 -11.353 23.787 1 48.53 ? C15 3WC 500 A 1 HETATM 9 C C11 3WC . . . G 4 -21.992 -12.347 25.508 1 46.11 ? C11 3WC 500 A 1 HETATM 10 C C20 3WC . . . G 4 -18.7 -12.212 28.003 1 50.35 ? C20 3WC 500 A 1 HETATM 11 C C22 3WC . . . G 4 -20.946 -12.974 27.496 1 45.65 ? C22 3WC 500 A 1 HETATM 12 N N10 3WC . . . G 4 -23.081 -12.441 24.728 1 47.01 ? N10 3WC 500 A 1 HETATM 13 C C24 3WC . . . G 4 -21.003 -13.682 28.699 1 48.18 ? C24 3WC 500 A 1 HETATM 14 C C26 3WC . . . G 4 -19.912 -13.66 29.573 1 48.75 ? C26 3WC 500 A 1 HETATM 15 N N11 3WC . . . G 4 -22.001 -13.009 26.689 1 43.94 ? N11 3WC 500 A 1 HETATM 16 C C2 3WC . . . G 4 -19.799 -12.234 27.135 1 48.25 ? C2 3WC 500 A 1 HETATM 17 C C28 3WC . . . G 4 -18.77 -12.921 29.219 1 52.67 ? C28 3WC 500 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #