data_3ZQR # _model_server_result.job_id siK8SEK-8xKmbGy4v0yZ2g _model_server_result.datetime_utc '2024-11-26 23:01:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zqr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":1029}' # _entry.id 3ZQR # _exptl.entry_id 3ZQR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.19 _cell.angle_gamma 90 _cell.entry_id 3ZQR _cell.length_a 46.6 _cell.length_b 61.837 _cell.length_c 58.224 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZQR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 N N N ? 4 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf7 E SG CYS 6 E CYS 6 1_555 E SG CYS 11 E CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf8 E SG CYS 7 E CYS 7 1_555 F SG CYS 7 F CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf9 E SG CYS 20 E CYS 20 1_555 F SG CYS 19 F CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf10 G SG CYS 6 G CYS 6 1_555 G SG CYS 11 G CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf11 G SG CYS 7 G CYS 7 1_555 H SG CYS 7 H CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf12 G SG CYS 20 G CYS 20 1_555 H SG CYS 19 H CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf13 I SG CYS 6 I CYS 6 1_555 I SG CYS 11 I CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? disulf ? disulf14 I SG CYS 7 I CYS 7 1_555 J SG CYS 7 J CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf15 I SG CYS 20 I CYS 20 1_555 J SG CYS 19 J CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf16 K SG CYS 6 K CYS 6 1_555 K SG CYS 11 K CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf17 K SG CYS 7 K CYS 7 1_555 L SG CYS 7 L CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? disulf ? disulf18 K SG CYS 20 K CYS 20 1_555 L SG CYS 19 L CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? covale ? covale1 B C PHE 24 B PHE 24 1_555 B N MEA 25 B MEA 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 B C MEA 25 B MEA 25 1_555 B N TYR 26 B TYR 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale3 D C PHE 24 D PHE 24 1_555 D N MEA 25 D MEA 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale4 D C MEA 25 D MEA 25 1_555 D N TYR 26 D TYR 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale5 F C PHE 24 F PHE 24 1_555 F N MEA 25 F MEA 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale6 F C MEA 25 F MEA 25 1_555 F N TYR 26 F TYR 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 H C PHE 24 H PHE 24 1_555 H N MEA 25 H MEA 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale8 H C MEA 25 H MEA 25 1_555 H N TYR 26 H TYR 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 J C PHE 24 J PHE 24 1_555 J N MEA 25 J MEA 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 J C MEA 25 J MEA 25 1_555 J N TYR 26 J TYR 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.301 ? covale ? covale11 L C PHE 24 L PHE 24 1_555 L N MEA 25 L MEA 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale12 L C MEA 25 L MEA 25 1_555 L N TYR 26 L TYR 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 N ZN ZN . B ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc2 N ZN ZN . B ZN 1030 1_555 O CL CL . B CL 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc3 N ZN ZN . B ZN 1030 1_555 F NE2 HIS 10 F HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc4 N ZN ZN . B ZN 1030 1_555 J NE2 HIS 10 J HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc5 D NE2 HIS 10 D HIS 10 1_555 Q ZN ZN . D ZN 1029 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc6 Q ZN ZN . D ZN 1029 1_555 R CL CL . D CL 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc7 Q ZN ZN . D ZN 1029 1_555 H NE2 HIS 10 H HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? metalc ? metalc8 Q ZN ZN . D ZN 1029 1_555 L NE2 HIS 10 L HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ZQR _atom_sites.fract_transf_matrix[1][1] 0.021459 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008319 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016172 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018421 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 IPH A 1 1022 1022 IPH IPH . N 4 ZN B 1 1030 1030 ZN ZN . O 5 CL B 1 1031 1031 CL CL . P 3 IPH C 1 1022 1022 IPH IPH . Q 4 ZN D 1 1029 1029 ZN ZN . R 5 CL D 1 1030 1030 CL CL . S 3 IPH E 1 1022 1022 IPH IPH . T 3 IPH H 1 1029 1029 IPH IPH . U 3 IPH I 1 1022 1022 IPH IPH . V 3 IPH K 1 1022 1022 IPH IPH . W 6 HOH A 1 2001 2001 HOH HOH . W 6 HOH A 2 2002 2002 HOH HOH . W 6 HOH A 3 2003 2003 HOH HOH . W 6 HOH A 4 2004 2004 HOH HOH . W 6 HOH A 5 2005 2005 HOH HOH . W 6 HOH A 6 2006 2006 HOH HOH . W 6 HOH A 7 2007 2007 HOH HOH . W 6 HOH A 8 2008 2008 HOH HOH . X 6 HOH B 1 2001 2001 HOH HOH . X 6 HOH B 2 2002 2002 HOH HOH . X 6 HOH B 3 2003 2003 HOH HOH . X 6 HOH B 4 2004 2004 HOH HOH . X 6 HOH B 5 2005 2005 HOH HOH . X 6 HOH B 6 2006 2006 HOH HOH . X 6 HOH B 7 2007 2007 HOH HOH . X 6 HOH B 8 2008 2008 HOH HOH . X 6 HOH B 9 2009 2009 HOH HOH . X 6 HOH B 10 2010 2010 HOH HOH . X 6 HOH B 11 2011 2011 HOH HOH . X 6 HOH B 12 2012 2012 HOH HOH . X 6 HOH B 13 2013 2013 HOH HOH . X 6 HOH B 14 2014 2014 HOH HOH . X 6 HOH B 15 2015 2015 HOH HOH . X 6 HOH B 16 2016 2016 HOH HOH . X 6 HOH B 17 2017 2017 HOH HOH . X 6 HOH B 18 2018 2018 HOH HOH . X 6 HOH B 19 2019 2019 HOH HOH . X 6 HOH B 20 2020 2020 HOH HOH . X 6 HOH B 21 2021 2021 HOH HOH . X 6 HOH B 22 2022 2022 HOH HOH . X 6 HOH B 23 2023 2023 HOH HOH . X 6 HOH B 24 2024 2024 HOH HOH . X 6 HOH B 25 2025 2025 HOH HOH . Y 6 HOH C 1 2001 2001 HOH HOH . Y 6 HOH C 2 2002 2002 HOH HOH . Y 6 HOH C 3 2003 2003 HOH HOH . Y 6 HOH C 4 2004 2004 HOH HOH . Y 6 HOH C 5 2005 2005 HOH HOH . Y 6 HOH C 6 2006 2006 HOH HOH . Y 6 HOH C 7 2007 2007 HOH HOH . Y 6 HOH C 8 2008 2008 HOH HOH . Z 6 HOH D 1 2001 2001 HOH HOH . Z 6 HOH D 2 2002 2002 HOH HOH . Z 6 HOH D 3 2003 2003 HOH HOH . Z 6 HOH D 4 2004 2004 HOH HOH . Z 6 HOH D 5 2005 2005 HOH HOH . Z 6 HOH D 6 2006 2006 HOH HOH . Z 6 HOH D 7 2007 2007 HOH HOH . Z 6 HOH D 8 2008 2008 HOH HOH . Z 6 HOH D 9 2009 2009 HOH HOH . Z 6 HOH D 10 2010 2010 HOH HOH . Z 6 HOH D 11 2011 2011 HOH HOH . Z 6 HOH D 12 2012 2012 HOH HOH . Z 6 HOH D 13 2013 2013 HOH HOH . Z 6 HOH D 14 2014 2014 HOH HOH . AA 6 HOH E 1 2001 2001 HOH HOH . BA 6 HOH F 1 2001 2001 HOH HOH . BA 6 HOH F 2 2002 2002 HOH HOH . BA 6 HOH F 3 2003 2003 HOH HOH . BA 6 HOH F 4 2004 2004 HOH HOH . BA 6 HOH F 5 2005 2005 HOH HOH . BA 6 HOH F 6 2006 2006 HOH HOH . BA 6 HOH F 7 2007 2007 HOH HOH . BA 6 HOH F 8 2008 2008 HOH HOH . CA 6 HOH G 1 2001 2001 HOH HOH . CA 6 HOH G 2 2002 2002 HOH HOH . CA 6 HOH G 3 2003 2003 HOH HOH . CA 6 HOH G 4 2004 2004 HOH HOH . CA 6 HOH G 5 2005 2005 HOH HOH . DA 6 HOH H 1 2001 2001 HOH HOH . DA 6 HOH H 2 2002 2002 HOH HOH . DA 6 HOH H 3 2003 2003 HOH HOH . DA 6 HOH H 4 2004 2004 HOH HOH . DA 6 HOH H 5 2005 2005 HOH HOH . DA 6 HOH H 6 2006 2006 HOH HOH . EA 6 HOH I 1 2001 2001 HOH HOH . EA 6 HOH I 2 2002 2002 HOH HOH . EA 6 HOH I 3 2003 2003 HOH HOH . EA 6 HOH I 4 2004 2004 HOH HOH . EA 6 HOH I 5 2005 2005 HOH HOH . EA 6 HOH I 6 2006 2006 HOH HOH . EA 6 HOH I 7 2007 2007 HOH HOH . EA 6 HOH I 8 2008 2008 HOH HOH . EA 6 HOH I 9 2009 2009 HOH HOH . EA 6 HOH I 10 2010 2010 HOH HOH . EA 6 HOH I 11 2011 2011 HOH HOH . EA 6 HOH I 12 2012 2012 HOH HOH . EA 6 HOH I 13 2013 2013 HOH HOH . EA 6 HOH I 14 2014 2014 HOH HOH . FA 6 HOH J 1 2001 2001 HOH HOH . FA 6 HOH J 2 2002 2002 HOH HOH . FA 6 HOH J 3 2003 2003 HOH HOH . FA 6 HOH J 4 2004 2004 HOH HOH . FA 6 HOH J 5 2005 2005 HOH HOH . FA 6 HOH J 6 2006 2006 HOH HOH . FA 6 HOH J 7 2007 2007 HOH HOH . FA 6 HOH J 8 2008 2008 HOH HOH . FA 6 HOH J 9 2009 2009 HOH HOH . GA 6 HOH K 1 2001 2001 HOH HOH . GA 6 HOH K 2 2002 2002 HOH HOH . GA 6 HOH K 3 2003 2003 HOH HOH . GA 6 HOH K 4 2004 2004 HOH HOH . HA 6 HOH L 1 2001 2001 HOH HOH . HA 6 HOH L 2 2002 2002 HOH HOH . HA 6 HOH L 3 2003 2003 HOH HOH . HA 6 HOH L 4 2004 2004 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id Q _atom_site.label_entity_id 4 _atom_site.Cartn_x 4.513 _atom_site.Cartn_y 5.996 _atom_site.Cartn_z 9.502 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 26.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1029 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #