data_3ZRM # _model_server_result.job_id Ip3CXo3M68wVR_W40OwTvA _model_server_result.datetime_utc '2025-01-11 00:49:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zrm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1388}' # _entry.id 3ZRM # _exptl.entry_id 3ZRM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 320.365 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-(4-HYDROXYPHENYL)-2-PYRIDIN-4-YL-5H-THIENO[3,2-C]PYRIDIN-4-ONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ZRM _cell.length_a 153.08 _cell.length_b 153.08 _cell.length_c 200.873 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZRM _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 193 A SER 215 1_555 A N PTR 194 A PTR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C PTR 194 A PTR 216 1_555 A N ILE 195 A ILE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale3 B C SER 193 B SER 215 1_555 B N PTR 194 B PTR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 B C PTR 194 B PTR 216 1_555 B N ILE 195 B ILE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C18 H12 N2 O2 S' _chem_comp.formula_weight 320.365 _chem_comp.id ZRM _chem_comp.mon_nstd_flag . _chem_comp.name 7-(4-HYDROXYPHENYL)-2-PYRIDIN-4-YL-5H-THIENO[3,2-C]PYRIDIN-4-ONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C3 ZRM sing 422 n y C4 C5 ZRM doub 423 n y C6 C7 ZRM doub 424 n y C6 C5 ZRM sing 425 n y C3 C2 ZRM doub 426 n y C7 C2 ZRM sing 427 n y C19 C20 ZRM doub 428 n y C19 C18 ZRM sing 429 n y C23 C22 ZRM sing 430 n y C23 C18 ZRM doub 431 n y C14 C13 ZRM sing 432 n y C14 C15 ZRM doub 433 n y C20 N21 ZRM sing 434 n y C22 N21 ZRM doub 435 n y C18 C15 ZRM sing 436 n n C5 C8 ZRM sing 437 n n C13 C17 ZRM doub 438 n y C13 C11 ZRM sing 439 n n C2 O1 ZRM sing 440 n n C15 S16 ZRM sing 441 n y C17 C8 ZRM sing 442 n n C17 S16 ZRM sing 443 n y C9 C8 ZRM doub 444 n n C9 N10 ZRM sing 445 n n C11 N10 ZRM sing 446 n n C11 O12 ZRM doub 447 n n C4 H4 ZRM sing 448 n n C3 H3 ZRM sing 449 n n C6 H6 ZRM sing 450 n n C7 H7 ZRM sing 451 n n C19 H19 ZRM sing 452 n n C20 H20 ZRM sing 453 n n C23 H23 ZRM sing 454 n n C22 H22 ZRM sing 455 n n C14 H14 ZRM sing 456 n n O1 H1 ZRM sing 457 n n C9 H9 ZRM sing 458 n n N10 H10 ZRM sing 459 n n # _atom_sites.entry_id 3ZRM _atom_sites.fract_transf_matrix[1][1] 0.006533 _atom_sites.fract_transf_matrix[1][2] 0.003772 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007543 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004978 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 1384 1384 SO4 SO4 . F 3 SO4 A 1 1385 1385 SO4 SO4 . G 3 SO4 A 1 1386 1386 SO4 SO4 . H 4 GOL A 1 1387 1387 GOL GOL . I 5 ZRM A 1 1388 1388 ZRM ZRM . J 3 SO4 B 1 1385 1385 SO4 SO4 . K 3 SO4 B 1 1386 1386 SO4 SO4 . L 3 SO4 B 1 1387 1387 SO4 SO4 . M 4 GOL B 1 1388 1388 GOL GOL . N 5 ZRM B 1 1389 1389 ZRM ZRM . O 6 HOH A 1 2001 2001 HOH HOH . O 6 HOH A 2 2002 2002 HOH HOH . O 6 HOH A 3 2003 2003 HOH HOH . O 6 HOH A 4 2004 2004 HOH HOH . O 6 HOH A 5 2005 2005 HOH HOH . O 6 HOH A 6 2006 2006 HOH HOH . O 6 HOH A 7 2007 2007 HOH HOH . O 6 HOH A 8 2008 2008 HOH HOH . O 6 HOH A 9 2009 2009 HOH HOH . O 6 HOH A 10 2010 2010 HOH HOH . O 6 HOH A 11 2011 2011 HOH HOH . O 6 HOH A 12 2012 2012 HOH HOH . O 6 HOH A 13 2013 2013 HOH HOH . O 6 HOH A 14 2014 2014 HOH HOH . O 6 HOH A 15 2015 2015 HOH HOH . O 6 HOH A 16 2016 2016 HOH HOH . O 6 HOH A 17 2017 2017 HOH HOH . O 6 HOH A 18 2018 2018 HOH HOH . O 6 HOH A 19 2019 2019 HOH HOH . O 6 HOH A 20 2020 2020 HOH HOH . O 6 HOH A 21 2021 2021 HOH HOH . O 6 HOH A 22 2022 2022 HOH HOH . O 6 HOH A 23 2023 2023 HOH HOH . O 6 HOH A 24 2024 2024 HOH HOH . O 6 HOH A 25 2025 2025 HOH HOH . O 6 HOH A 26 2026 2026 HOH HOH . O 6 HOH A 27 2027 2027 HOH HOH . O 6 HOH A 28 2028 2028 HOH HOH . O 6 HOH A 29 2029 2029 HOH HOH . O 6 HOH A 30 2030 2030 HOH HOH . O 6 HOH A 31 2031 2031 HOH HOH . O 6 HOH A 32 2032 2032 HOH HOH . O 6 HOH A 33 2033 2033 HOH HOH . O 6 HOH A 34 2034 2034 HOH HOH . O 6 HOH A 35 2035 2035 HOH HOH . O 6 HOH A 36 2036 2036 HOH HOH . O 6 HOH A 37 2037 2037 HOH HOH . O 6 HOH A 38 2038 2038 HOH HOH . O 6 HOH A 39 2039 2039 HOH HOH . O 6 HOH A 40 2040 2040 HOH HOH . O 6 HOH A 41 2041 2041 HOH HOH . O 6 HOH A 42 2042 2042 HOH HOH . O 6 HOH A 43 2043 2043 HOH HOH . O 6 HOH A 44 2044 2044 HOH HOH . O 6 HOH A 45 2045 2045 HOH HOH . O 6 HOH A 46 2046 2046 HOH HOH . O 6 HOH A 47 2047 2047 HOH HOH . O 6 HOH A 48 2048 2048 HOH HOH . O 6 HOH A 49 2049 2049 HOH HOH . O 6 HOH A 50 2050 2050 HOH HOH . O 6 HOH A 51 2051 2051 HOH HOH . O 6 HOH A 52 2052 2052 HOH HOH . O 6 HOH A 53 2053 2053 HOH HOH . O 6 HOH A 54 2054 2054 HOH HOH . O 6 HOH A 55 2055 2055 HOH HOH . O 6 HOH A 56 2056 2056 HOH HOH . O 6 HOH A 57 2057 2057 HOH HOH . O 6 HOH A 58 2058 2058 HOH HOH . O 6 HOH A 59 2059 2059 HOH HOH . O 6 HOH A 60 2060 2060 HOH HOH . O 6 HOH A 61 2061 2061 HOH HOH . O 6 HOH A 62 2062 2062 HOH HOH . O 6 HOH A 63 2063 2063 HOH HOH . O 6 HOH A 64 2064 2064 HOH HOH . O 6 HOH A 65 2065 2065 HOH HOH . O 6 HOH A 66 2066 2066 HOH HOH . O 6 HOH A 67 2067 2067 HOH HOH . O 6 HOH A 68 2068 2068 HOH HOH . O 6 HOH A 69 2069 2069 HOH HOH . O 6 HOH A 70 2070 2070 HOH HOH . O 6 HOH A 71 2071 2071 HOH HOH . O 6 HOH A 72 2072 2072 HOH HOH . O 6 HOH A 73 2073 2073 HOH HOH . O 6 HOH A 74 2074 2074 HOH HOH . O 6 HOH A 75 2075 2075 HOH HOH . O 6 HOH A 76 2076 2076 HOH HOH . O 6 HOH A 77 2077 2077 HOH HOH . O 6 HOH A 78 2078 2078 HOH HOH . O 6 HOH A 79 2079 2079 HOH HOH . O 6 HOH A 80 2080 2080 HOH HOH . O 6 HOH A 81 2081 2081 HOH HOH . O 6 HOH A 82 2082 2082 HOH HOH . O 6 HOH A 83 2083 2083 HOH HOH . O 6 HOH A 84 2084 2084 HOH HOH . O 6 HOH A 85 2085 2085 HOH HOH . O 6 HOH A 86 2086 2086 HOH HOH . O 6 HOH A 87 2087 2087 HOH HOH . O 6 HOH A 88 2088 2088 HOH HOH . O 6 HOH A 89 2089 2089 HOH HOH . O 6 HOH A 90 2090 2090 HOH HOH . O 6 HOH A 91 2091 2091 HOH HOH . P 6 HOH B 1 2001 2001 HOH HOH . P 6 HOH B 2 2002 2002 HOH HOH . P 6 HOH B 3 2003 2003 HOH HOH . P 6 HOH B 4 2004 2004 HOH HOH . P 6 HOH B 5 2005 2005 HOH HOH . P 6 HOH B 6 2006 2006 HOH HOH . P 6 HOH B 7 2007 2007 HOH HOH . P 6 HOH B 8 2008 2008 HOH HOH . P 6 HOH B 9 2009 2009 HOH HOH . P 6 HOH B 10 2010 2010 HOH HOH . P 6 HOH B 11 2011 2011 HOH HOH . P 6 HOH B 12 2012 2012 HOH HOH . P 6 HOH B 13 2013 2013 HOH HOH . P 6 HOH B 14 2014 2014 HOH HOH . P 6 HOH B 15 2015 2015 HOH HOH . P 6 HOH B 16 2016 2016 HOH HOH . P 6 HOH B 17 2017 2017 HOH HOH . P 6 HOH B 18 2018 2018 HOH HOH . P 6 HOH B 19 2019 2019 HOH HOH . P 6 HOH B 20 2020 2020 HOH HOH . P 6 HOH B 21 2021 2021 HOH HOH . P 6 HOH B 22 2022 2022 HOH HOH . P 6 HOH B 23 2023 2023 HOH HOH . P 6 HOH B 24 2024 2024 HOH HOH . P 6 HOH B 25 2025 2025 HOH HOH . P 6 HOH B 26 2026 2026 HOH HOH . P 6 HOH B 27 2027 2027 HOH HOH . P 6 HOH B 28 2028 2028 HOH HOH . P 6 HOH B 29 2029 2029 HOH HOH . P 6 HOH B 30 2030 2030 HOH HOH . P 6 HOH B 31 2031 2031 HOH HOH . P 6 HOH B 32 2032 2032 HOH HOH . P 6 HOH B 33 2033 2033 HOH HOH . P 6 HOH B 34 2034 2034 HOH HOH . P 6 HOH B 35 2035 2035 HOH HOH . P 6 HOH B 36 2036 2036 HOH HOH . P 6 HOH B 37 2037 2037 HOH HOH . P 6 HOH B 38 2038 2038 HOH HOH . P 6 HOH B 39 2039 2039 HOH HOH . P 6 HOH B 40 2040 2040 HOH HOH . P 6 HOH B 41 2041 2041 HOH HOH . P 6 HOH B 42 2042 2042 HOH HOH . P 6 HOH B 43 2043 2043 HOH HOH . P 6 HOH B 44 2044 2044 HOH HOH . P 6 HOH B 45 2045 2045 HOH HOH . P 6 HOH B 46 2046 2046 HOH HOH . P 6 HOH B 47 2047 2047 HOH HOH . P 6 HOH B 48 2048 2048 HOH HOH . P 6 HOH B 49 2049 2049 HOH HOH . P 6 HOH B 50 2050 2050 HOH HOH . P 6 HOH B 51 2051 2051 HOH HOH . P 6 HOH B 52 2052 2052 HOH HOH . P 6 HOH B 53 2053 2053 HOH HOH . P 6 HOH B 54 2054 2054 HOH HOH . P 6 HOH B 55 2055 2055 HOH HOH . P 6 HOH B 56 2056 2056 HOH HOH . P 6 HOH B 57 2057 2057 HOH HOH . P 6 HOH B 58 2058 2058 HOH HOH . P 6 HOH B 59 2059 2059 HOH HOH . P 6 HOH B 60 2060 2060 HOH HOH . P 6 HOH B 61 2061 2061 HOH HOH . P 6 HOH B 62 2062 2062 HOH HOH . P 6 HOH B 63 2063 2063 HOH HOH . P 6 HOH B 64 2064 2064 HOH HOH . P 6 HOH B 65 2065 2065 HOH HOH . P 6 HOH B 66 2066 2066 HOH HOH . P 6 HOH B 67 2067 2067 HOH HOH . P 6 HOH B 68 2068 2068 HOH HOH . P 6 HOH B 69 2069 2069 HOH HOH . P 6 HOH B 70 2070 2070 HOH HOH . P 6 HOH B 71 2071 2071 HOH HOH . P 6 HOH B 72 2072 2072 HOH HOH . P 6 HOH B 73 2073 2073 HOH HOH . P 6 HOH B 74 2074 2074 HOH HOH . P 6 HOH B 75 2075 2075 HOH HOH . P 6 HOH B 76 2076 2076 HOH HOH . P 6 HOH B 77 2077 2077 HOH HOH . P 6 HOH B 78 2078 2078 HOH HOH . P 6 HOH B 79 2079 2079 HOH HOH . P 6 HOH B 80 2080 2080 HOH HOH . P 6 HOH B 81 2081 2081 HOH HOH . P 6 HOH B 82 2082 2082 HOH HOH . P 6 HOH B 83 2083 2083 HOH HOH . P 6 HOH B 84 2084 2084 HOH HOH . P 6 HOH B 85 2085 2085 HOH HOH . P 6 HOH B 86 2086 2086 HOH HOH . P 6 HOH B 87 2087 2087 HOH HOH . P 6 HOH B 88 2088 2088 HOH HOH . P 6 HOH B 89 2089 2089 HOH HOH . Q 6 HOH X 1 2001 2001 HOH HOH . Q 6 HOH X 2 2002 2002 HOH HOH . R 6 HOH Y 1 2001 2001 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 ZRM . . . I 5 108.414 21.074 -11.72 1 54.57 ? C4 ZRM 1388 A 1 HETATM 2 C C6 ZRM . . . I 5 108.353 23.453 -11.775 1 52.38 ? C6 ZRM 1388 A 1 HETATM 3 C C3 ZRM . . . I 5 109.695 21.079 -12.232 1 56.17 ? C3 ZRM 1388 A 1 HETATM 4 C C7 ZRM . . . I 5 109.631 23.475 -12.295 1 55.26 ? C7 ZRM 1388 A 1 HETATM 5 C C19 ZRM . . . I 5 104.054 27.097 -12.988 1 31.02 ? C19 ZRM 1388 A 1 HETATM 6 C C23 ZRM . . . I 5 101.992 26.569 -11.928 1 29.05 ? C23 ZRM 1388 A 1 HETATM 7 C C14 ZRM . . . I 5 103.251 24.113 -10.843 1 33.59 ? C14 ZRM 1388 A 1 HETATM 8 C C20 ZRM . . . I 5 103.469 28.274 -13.405 1 27.63 ? C20 ZRM 1388 A 1 HETATM 9 C C22 ZRM . . . I 5 101.501 27.769 -12.405 1 29.89 ? C22 ZRM 1388 A 1 HETATM 10 C C18 ZRM . . . I 5 103.293 26.227 -12.231 1 31.23 ? C18 ZRM 1388 A 1 HETATM 11 C C5 ZRM . . . I 5 107.731 22.253 -11.486 1 48.82 ? C5 ZRM 1388 A 1 HETATM 12 C C13 ZRM . . . I 5 104.105 23.04 -10.493 1 32.81 ? C13 ZRM 1388 A 1 HETATM 13 C C2 ZRM . . . I 5 110.294 22.284 -12.515 1 55.82 ? C2 ZRM 1388 A 1 HETATM 14 C C15 ZRM . . . I 5 103.843 25.003 -11.715 1 34.85 ? C15 ZRM 1388 A 1 HETATM 15 C C17 ZRM . . . I 5 105.34 23.123 -11.093 1 34.27 ? C17 ZRM 1388 A 1 HETATM 16 C C9 ZRM . . . I 5 106.075 21.216 -10.086 1 36.28 ? C9 ZRM 1388 A 1 HETATM 17 C C8 ZRM . . . I 5 106.383 22.216 -10.919 1 38.02 ? C8 ZRM 1388 A 1 HETATM 18 C C11 ZRM . . . I 5 103.799 21.962 -9.603 1 34.54 ? C11 ZRM 1388 A 1 HETATM 19 N N21 ZRM . . . I 5 102.209 28.642 -13.132 1 26.8 ? N21 ZRM 1388 A 1 HETATM 20 N N10 ZRM . . . I 5 104.852 21.081 -9.468 1 33.95 ? N10 ZRM 1388 A 1 HETATM 21 O O12 ZRM . . . I 5 102.709 21.867 -9.052 1 33.11 ? O12 ZRM 1388 A 1 HETATM 22 O O1 ZRM . . . I 5 111.572 22.283 -13.031 1 54.33 ? O1 ZRM 1388 A 1 HETATM 23 S S16 ZRM . . . I 5 105.448 24.505 -12.108 1 34.86 ? S16 ZRM 1388 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 23 #