data_3ZRY # _model_server_result.job_id pq9pdzO8zih2lY8BDYrGhA _model_server_result.datetime_utc '2024-11-15 05:57:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zry # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":700}' # _entry.id 3ZRY # _exptl.entry_id 3ZRY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.92 _cell.angle_gamma 90 _cell.entry_id 3ZRY _cell.length_a 107.69 _cell.length_b 174.91 _cell.length_c 164.26 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZRY _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA nonameric 9 author_and_software_defined_assembly 1 PISA decameric 10 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,T,U,V,W,X,Y,Z,AA,BA,CA 1 1 J,K,L,M,N,O,P,Q,R,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 U N N ? 8 W N N ? 8 Y N N ? 8 AA N N ? 8 CA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 178 A THR 178 1_555 U MG MG . A MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc2 T O1G ANP . A ANP 600 1_555 U MG MG . A MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc3 T O1B ANP . A ANP 600 1_555 U MG MG . A MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.992 ? metalc ? metalc4 B OG1 THR 178 B THR 178 1_555 W MG MG . B MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc5 V O1G ANP . B ANP 600 1_555 W MG MG . B MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc6 C OG1 THR 178 C THR 178 1_555 Y MG MG . C MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc7 X O1G ANP . C ANP 600 1_555 Y MG MG . C MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? metalc ? metalc8 D OG1 THR 164 D THR 164 1_555 AA MG MG . D MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.807 ? metalc ? metalc9 D OE2 GLU 193 D GLU 193 1_555 AA MG MG . D MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc10 Z O1G ANP . D ANP 600 1_555 AA MG MG . D MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc11 Z O1B ANP . D ANP 600 1_555 AA MG MG . D MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.815 ? metalc ? metalc12 F OG1 THR 164 F THR 164 1_555 CA MG MG . F MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc13 F OE1 GLU 189 F GLU 189 1_555 CA MG MG . F MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc14 F OD1 ASP 256 F ASP 256 1_555 CA MG MG . F MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.893 ? metalc ? metalc15 BA O1G ANP . F ANP 600 1_555 CA MG MG . F MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ZRY _atom_sites.fract_transf_matrix[1][1] 0.009286 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000636 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005717 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006102 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code T 7 ANP A 1 600 600 ANP ANP . U 8 MG A 1 700 700 MG MG . V 7 ANP B 1 600 600 ANP ANP . W 8 MG B 1 700 700 MG MG . X 7 ANP C 1 600 600 ANP ANP . Y 8 MG C 1 700 700 MG MG . Z 7 ANP D 1 600 600 ANP ANP . AA 8 MG D 1 700 700 MG MG . BA 7 ANP F 1 600 600 ANP ANP . CA 8 MG F 1 700 700 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id W _atom_site.label_entity_id 8 _atom_site.Cartn_x 6.969 _atom_site.Cartn_y 13.558 _atom_site.Cartn_z 15.692 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 410.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 700 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 47 _model_server_stats.query_time_ms 401 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #