data_3ZS2 # _model_server_result.job_id AVIVnjD7mixS4uyCN-OiEg _model_server_result.datetime_utc '2024-11-13 04:25:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zs2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":1030}' # _entry.id 3ZS2 # _exptl.entry_id 3ZS2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.32 _cell.angle_gamma 90 _cell.entry_id 3ZS2 _cell.length_a 57.66 _cell.length_b 62.17 _cell.length_c 46.678 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZS2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 O N N ? 5 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.714 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? disulf ? disulf7 E SG CYS 6 E CYS 6 1_555 E SG CYS 11 E CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? disulf ? disulf8 E SG CYS 7 E CYS 7 1_555 F SG CYS 7 F CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? disulf ? disulf9 E SG CYS 20 E CYS 20 1_555 F SG CYS 19 F CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf10 G SG CYS 6 G CYS 6 1_555 G SG CYS 11 G CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf11 G SG CYS 7 G CYS 7 1_555 H SG CYS 7 H CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.897 ? disulf ? disulf12 G SG CYS 20 G CYS 20 1_555 H SG CYS 19 H CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? disulf ? disulf13 I SG CYS 6 I CYS 6 1_555 I SG CYS 11 I CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.75 ? disulf ? disulf14 I SG CYS 7 I CYS 7 1_555 J SG CYS 7 J CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? disulf ? disulf15 I SG CYS 20 I CYS 20 1_555 J SG CYS 19 J CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? disulf ? disulf16 K SG CYS 6 K CYS 6 1_555 K SG CYS 11 K CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? disulf ? disulf17 K SG CYS 7 K CYS 7 1_555 L SG CYS 7 L CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? disulf ? disulf18 K SG CYS 20 K CYS 20 1_555 L SG CYS 19 L CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.775 ? covale ? covale1 B C TYR 25 B TYR 25 1_555 B N MEA 26 B MEA 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.683 ? covale ? covale2 B C MEA 26 B MEA 26 1_555 B N THR 27 B THR 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.153 ? covale ? covale3 D C TYR 25 D TYR 25 1_555 D N MEA 26 D MEA 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.379 ? covale ? covale4 F C TYR 25 F TYR 25 1_555 F N MEA 26 F MEA 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.546 ? covale ? covale5 H C TYR 25 H TYR 25 1_555 H N MEA 26 H MEA 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.644 ? covale ? covale6 H C MEA 26 H MEA 26 1_555 H N THR 27 H THR 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale7 J C TYR 25 J TYR 25 1_555 J N MEA 26 J MEA 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? covale ? covale8 J C MEA 26 J MEA 26 1_555 J N THR 27 J THR 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale9 L C TYR 25 L TYR 25 1_555 L N MEA 26 L MEA 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.373 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 O ZN ZN . B ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc2 N CL CL . B CL 1028 1_555 O ZN ZN . B ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc3 O ZN ZN . B ZN 1030 1_555 F NE2 HIS 10 F HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.558 ? metalc ? metalc4 O ZN ZN . B ZN 1030 1_555 J NE2 HIS 10 J HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc5 Q CL CL . C CL 1028 1_555 R ZN ZN . D ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc6 D NE2 HIS 10 D HIS 10 1_555 R ZN ZN . D ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.657 ? metalc ? metalc7 R ZN ZN . D ZN 1030 1_555 H NE2 HIS 10 H HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc8 R ZN ZN . D ZN 1030 1_555 L NE2 HIS 10 L HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ZS2 _atom_sites.fract_transf_matrix[1][1] 0.017343 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006769 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016085 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022997 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 IPH A 1 1022 1022 IPH IPH . N 4 CL B 1 1028 1028 CL CL . O 5 ZN B 1 1030 1030 ZN ZN . P 3 IPH C 1 1022 1022 IPH IPH . Q 4 CL C 1 1028 1028 CL CL . R 5 ZN D 1 1030 1030 ZN ZN . S 3 IPH E 1 1022 1022 IPH IPH . T 3 IPH G 1 1022 1022 IPH IPH . U 3 IPH I 1 1022 1022 IPH IPH . V 3 IPH K 1 1022 1022 IPH IPH . W 6 HOH A 1 2001 2001 HOH HOH . W 6 HOH A 2 2002 2002 HOH HOH . X 6 HOH B 1 2001 2001 HOH HOH . X 6 HOH B 2 2002 2002 HOH HOH . X 6 HOH B 3 2003 2003 HOH HOH . X 6 HOH B 4 2004 2004 HOH HOH . X 6 HOH B 5 2005 2005 HOH HOH . X 6 HOH B 6 2006 2006 HOH HOH . X 6 HOH B 7 2007 2007 HOH HOH . X 6 HOH B 8 2008 2008 HOH HOH . X 6 HOH B 9 2009 2009 HOH HOH . X 6 HOH B 10 2010 2010 HOH HOH . X 6 HOH B 11 2011 2011 HOH HOH . X 6 HOH B 12 2012 2012 HOH HOH . X 6 HOH B 13 2013 2013 HOH HOH . X 6 HOH B 14 2014 2014 HOH HOH . X 6 HOH B 15 2015 2015 HOH HOH . X 6 HOH B 16 2016 2016 HOH HOH . X 6 HOH B 17 2017 2017 HOH HOH . Y 6 HOH C 1 2001 2001 HOH HOH . Y 6 HOH C 2 2002 2002 HOH HOH . Y 6 HOH C 3 2003 2003 HOH HOH . Y 6 HOH C 4 2004 2004 HOH HOH . Y 6 HOH C 5 2005 2005 HOH HOH . Y 6 HOH C 6 2006 2006 HOH HOH . Y 6 HOH C 7 2007 2007 HOH HOH . Y 6 HOH C 8 2008 2008 HOH HOH . Y 6 HOH C 9 2009 2009 HOH HOH . Y 6 HOH C 10 2010 2010 HOH HOH . Y 6 HOH C 11 2011 2011 HOH HOH . Y 6 HOH C 12 2012 2012 HOH HOH . Y 6 HOH C 13 2013 2013 HOH HOH . Y 6 HOH C 14 2014 2014 HOH HOH . Y 6 HOH C 15 2015 2015 HOH HOH . Y 6 HOH C 16 2016 2016 HOH HOH . Y 6 HOH C 17 2017 2017 HOH HOH . Z 6 HOH D 1 2001 2001 HOH HOH . Z 6 HOH D 2 2002 2002 HOH HOH . Z 6 HOH D 3 2003 2003 HOH HOH . Z 6 HOH D 4 2004 2004 HOH HOH . Z 6 HOH D 5 2005 2005 HOH HOH . Z 6 HOH D 6 2006 2006 HOH HOH . Z 6 HOH D 7 2007 2007 HOH HOH . Z 6 HOH D 8 2008 2008 HOH HOH . Z 6 HOH D 9 2009 2009 HOH HOH . Z 6 HOH D 10 2010 2010 HOH HOH . AA 6 HOH E 1 2001 2001 HOH HOH . AA 6 HOH E 2 2002 2002 HOH HOH . AA 6 HOH E 3 2003 2003 HOH HOH . AA 6 HOH E 4 2004 2004 HOH HOH . AA 6 HOH E 5 2005 2005 HOH HOH . AA 6 HOH E 6 2006 2006 HOH HOH . AA 6 HOH E 7 2007 2007 HOH HOH . BA 6 HOH F 1 2001 2001 HOH HOH . BA 6 HOH F 2 2002 2002 HOH HOH . BA 6 HOH F 3 2003 2003 HOH HOH . BA 6 HOH F 4 2004 2004 HOH HOH . BA 6 HOH F 5 2005 2005 HOH HOH . BA 6 HOH F 6 2006 2006 HOH HOH . BA 6 HOH F 7 2007 2007 HOH HOH . BA 6 HOH F 8 2008 2008 HOH HOH . BA 6 HOH F 9 2009 2009 HOH HOH . BA 6 HOH F 10 2010 2010 HOH HOH . BA 6 HOH F 11 2011 2011 HOH HOH . BA 6 HOH F 12 2012 2012 HOH HOH . BA 6 HOH F 13 2013 2013 HOH HOH . BA 6 HOH F 14 2014 2014 HOH HOH . BA 6 HOH F 15 2015 2015 HOH HOH . CA 6 HOH G 1 2001 2001 HOH HOH . CA 6 HOH G 2 2002 2002 HOH HOH . CA 6 HOH G 3 2003 2003 HOH HOH . CA 6 HOH G 4 2004 2004 HOH HOH . CA 6 HOH G 5 2005 2005 HOH HOH . CA 6 HOH G 6 2006 2006 HOH HOH . CA 6 HOH G 7 2007 2007 HOH HOH . CA 6 HOH G 8 2008 2008 HOH HOH . CA 6 HOH G 9 2009 2009 HOH HOH . CA 6 HOH G 10 2010 2010 HOH HOH . CA 6 HOH G 11 2011 2011 HOH HOH . CA 6 HOH G 12 2012 2012 HOH HOH . CA 6 HOH G 13 2013 2013 HOH HOH . CA 6 HOH G 14 2014 2014 HOH HOH . CA 6 HOH G 15 2015 2015 HOH HOH . CA 6 HOH G 16 2016 2016 HOH HOH . CA 6 HOH G 17 2017 2017 HOH HOH . DA 6 HOH H 1 2001 2001 HOH HOH . DA 6 HOH H 2 2002 2002 HOH HOH . DA 6 HOH H 3 2003 2003 HOH HOH . DA 6 HOH H 4 2004 2004 HOH HOH . DA 6 HOH H 5 2005 2005 HOH HOH . DA 6 HOH H 6 2006 2006 HOH HOH . DA 6 HOH H 7 2007 2007 HOH HOH . DA 6 HOH H 8 2008 2008 HOH HOH . DA 6 HOH H 9 2009 2009 HOH HOH . DA 6 HOH H 10 2010 2010 HOH HOH . DA 6 HOH H 11 2011 2011 HOH HOH . DA 6 HOH H 12 2012 2012 HOH HOH . DA 6 HOH H 13 2013 2013 HOH HOH . DA 6 HOH H 14 2014 2014 HOH HOH . DA 6 HOH H 15 2015 2015 HOH HOH . DA 6 HOH H 16 2016 2016 HOH HOH . DA 6 HOH H 17 2017 2017 HOH HOH . EA 6 HOH I 1 2001 2001 HOH HOH . EA 6 HOH I 2 2002 2002 HOH HOH . EA 6 HOH I 3 2003 2003 HOH HOH . EA 6 HOH I 4 2004 2004 HOH HOH . EA 6 HOH I 5 2005 2005 HOH HOH . EA 6 HOH I 6 2006 2006 HOH HOH . EA 6 HOH I 7 2007 2007 HOH HOH . EA 6 HOH I 8 2008 2008 HOH HOH . EA 6 HOH I 9 2009 2009 HOH HOH . EA 6 HOH I 10 2010 2010 HOH HOH . EA 6 HOH I 11 2011 2011 HOH HOH . EA 6 HOH I 12 2012 2012 HOH HOH . EA 6 HOH I 13 2013 2013 HOH HOH . EA 6 HOH I 14 2014 2014 HOH HOH . EA 6 HOH I 15 2015 2015 HOH HOH . EA 6 HOH I 16 2016 2016 HOH HOH . EA 6 HOH I 17 2017 2017 HOH HOH . EA 6 HOH I 18 2018 2018 HOH HOH . EA 6 HOH I 19 2019 2019 HOH HOH . FA 6 HOH J 1 2001 2001 HOH HOH . FA 6 HOH J 2 2002 2002 HOH HOH . FA 6 HOH J 3 2003 2003 HOH HOH . FA 6 HOH J 4 2004 2004 HOH HOH . FA 6 HOH J 5 2005 2005 HOH HOH . FA 6 HOH J 6 2006 2006 HOH HOH . FA 6 HOH J 7 2007 2007 HOH HOH . FA 6 HOH J 8 2008 2008 HOH HOH . FA 6 HOH J 9 2009 2009 HOH HOH . FA 6 HOH J 10 2010 2010 HOH HOH . FA 6 HOH J 11 2011 2011 HOH HOH . FA 6 HOH J 12 2012 2012 HOH HOH . FA 6 HOH J 13 2013 2013 HOH HOH . FA 6 HOH J 14 2014 2014 HOH HOH . FA 6 HOH J 15 2015 2015 HOH HOH . FA 6 HOH J 16 2016 2016 HOH HOH . GA 6 HOH K 1 2001 2001 HOH HOH . GA 6 HOH K 2 2002 2002 HOH HOH . GA 6 HOH K 3 2003 2003 HOH HOH . GA 6 HOH K 4 2004 2004 HOH HOH . GA 6 HOH K 5 2005 2005 HOH HOH . GA 6 HOH K 6 2006 2006 HOH HOH . GA 6 HOH K 7 2007 2007 HOH HOH . GA 6 HOH K 8 2008 2008 HOH HOH . GA 6 HOH K 9 2009 2009 HOH HOH . HA 6 HOH L 1 2001 2001 HOH HOH . HA 6 HOH L 2 2002 2002 HOH HOH . HA 6 HOH L 3 2003 2003 HOH HOH . HA 6 HOH L 4 2004 2004 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id R _atom_site.label_entity_id 5 _atom_site.Cartn_x 7.874 _atom_site.Cartn_y -5.596 _atom_site.Cartn_z -14.043 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.17 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1030 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #