data_3ZSK # _model_server_result.job_id -V8ghy4JsURE0IUHZRZGZA _model_server_result.datetime_utc '2024-12-02 21:09:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zsk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 3ZSK # _exptl.entry_id 3ZSK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ZSK _cell.length_a 35.83 _cell.length_b 58.2 _cell.length_c 62.54 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZSK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3ZSK _atom_sites.fract_transf_matrix[1][1] 0.02791 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017182 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01599 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 501 501 GOL GOL . C 2 GOL A 1 502 502 GOL GOL . D 3 HOH A 1 2001 2001 HOH HOH . D 3 HOH A 2 2002 2002 HOH HOH . D 3 HOH A 3 2003 2003 HOH HOH . D 3 HOH A 4 2004 2004 HOH HOH . D 3 HOH A 5 2005 2005 HOH HOH . D 3 HOH A 6 2012 2012 HOH HOH . D 3 HOH A 7 2013 2013 HOH HOH . D 3 HOH A 8 2014 2014 HOH HOH . D 3 HOH A 9 2015 2015 HOH HOH . D 3 HOH A 10 2016 2016 HOH HOH . D 3 HOH A 11 2017 2017 HOH HOH . D 3 HOH A 12 2018 2018 HOH HOH . D 3 HOH A 13 2019 2019 HOH HOH . D 3 HOH A 14 2020 2020 HOH HOH . D 3 HOH A 15 2021 2021 HOH HOH . D 3 HOH A 16 2022 2022 HOH HOH . D 3 HOH A 17 2023 2023 HOH HOH . D 3 HOH A 18 2024 2024 HOH HOH . D 3 HOH A 19 2025 2025 HOH HOH . D 3 HOH A 20 2026 2026 HOH HOH . D 3 HOH A 21 2027 2027 HOH HOH . D 3 HOH A 22 2028 2028 HOH HOH . D 3 HOH A 23 2029 2029 HOH HOH . D 3 HOH A 24 2030 2030 HOH HOH . D 3 HOH A 25 2031 2031 HOH HOH . D 3 HOH A 26 2032 2032 HOH HOH . D 3 HOH A 27 2033 2033 HOH HOH . D 3 HOH A 28 2034 2034 HOH HOH . D 3 HOH A 29 2035 2035 HOH HOH . D 3 HOH A 30 2036 2036 HOH HOH . D 3 HOH A 31 2037 2037 HOH HOH . D 3 HOH A 32 2038 2038 HOH HOH . D 3 HOH A 33 2039 2039 HOH HOH . D 3 HOH A 34 2040 2040 HOH HOH . D 3 HOH A 35 2041 2041 HOH HOH . D 3 HOH A 36 2042 2042 HOH HOH . D 3 HOH A 37 2043 2043 HOH HOH . D 3 HOH A 38 2044 2044 HOH HOH . D 3 HOH A 39 2045 2045 HOH HOH . D 3 HOH A 40 2046 2046 HOH HOH . D 3 HOH A 41 2047 2047 HOH HOH . D 3 HOH A 42 2048 2048 HOH HOH . D 3 HOH A 43 2049 2049 HOH HOH . D 3 HOH A 44 2050 2050 HOH HOH . D 3 HOH A 45 2051 2051 HOH HOH . D 3 HOH A 46 2052 2052 HOH HOH . D 3 HOH A 47 2053 2053 HOH HOH . D 3 HOH A 48 2054 2054 HOH HOH . D 3 HOH A 49 2055 2055 HOH HOH . D 3 HOH A 50 2056 2056 HOH HOH . D 3 HOH A 51 2057 2057 HOH HOH . D 3 HOH A 52 2058 2058 HOH HOH . D 3 HOH A 53 2059 2059 HOH HOH . D 3 HOH A 54 2060 2060 HOH HOH . D 3 HOH A 55 2061 2061 HOH HOH . D 3 HOH A 56 2062 2062 HOH HOH . D 3 HOH A 57 2063 2063 HOH HOH . D 3 HOH A 58 2064 2064 HOH HOH . D 3 HOH A 59 2065 2065 HOH HOH . D 3 HOH A 60 2066 2066 HOH HOH . D 3 HOH A 61 2067 2067 HOH HOH . D 3 HOH A 62 2068 2068 HOH HOH . D 3 HOH A 63 2069 2069 HOH HOH . D 3 HOH A 64 2070 2070 HOH HOH . D 3 HOH A 65 2071 2071 HOH HOH . D 3 HOH A 66 2072 2072 HOH HOH . D 3 HOH A 67 2073 2073 HOH HOH . D 3 HOH A 68 2074 2074 HOH HOH . D 3 HOH A 69 2075 2075 HOH HOH . D 3 HOH A 70 2076 2076 HOH HOH . D 3 HOH A 71 2077 2077 HOH HOH . D 3 HOH A 72 2078 2078 HOH HOH . D 3 HOH A 73 2079 2079 HOH HOH . D 3 HOH A 74 2080 2080 HOH HOH . D 3 HOH A 75 2081 2081 HOH HOH . D 3 HOH A 76 2082 2082 HOH HOH . D 3 HOH A 77 2083 2083 HOH HOH . D 3 HOH A 78 2084 2084 HOH HOH . D 3 HOH A 79 2085 2085 HOH HOH . D 3 HOH A 80 2086 2086 HOH HOH . D 3 HOH A 81 2087 2087 HOH HOH . D 3 HOH A 82 2088 2088 HOH HOH . D 3 HOH A 83 2089 2089 HOH HOH . D 3 HOH A 84 2090 2090 HOH HOH . D 3 HOH A 85 2091 2091 HOH HOH . D 3 HOH A 86 2092 2092 HOH HOH . D 3 HOH A 87 2093 2093 HOH HOH . D 3 HOH A 88 2094 2094 HOH HOH . D 3 HOH A 89 2095 2095 HOH HOH . D 3 HOH A 90 2096 2096 HOH HOH . D 3 HOH A 91 2097 2097 HOH HOH . D 3 HOH A 92 2098 2098 HOH HOH . D 3 HOH A 93 2099 2099 HOH HOH . D 3 HOH A 94 2100 2100 HOH HOH . D 3 HOH A 95 2101 2101 HOH HOH . D 3 HOH A 96 2102 2102 HOH HOH . D 3 HOH A 97 2103 2103 HOH HOH . D 3 HOH A 98 2104 2104 HOH HOH . D 3 HOH A 99 2105 2105 HOH HOH . D 3 HOH A 100 2106 2106 HOH HOH . D 3 HOH A 101 2107 2107 HOH HOH . D 3 HOH A 102 2108 2108 HOH HOH . D 3 HOH A 103 2109 2109 HOH HOH . D 3 HOH A 104 2110 2110 HOH HOH . D 3 HOH A 105 2111 2111 HOH HOH . D 3 HOH A 106 2112 2112 HOH HOH . D 3 HOH A 107 2113 2113 HOH HOH . D 3 HOH A 108 2114 2114 HOH HOH . D 3 HOH A 109 2115 2115 HOH HOH . D 3 HOH A 110 2116 2116 HOH HOH . D 3 HOH A 111 2117 2117 HOH HOH . D 3 HOH A 112 2118 2118 HOH HOH . D 3 HOH A 113 2119 2119 HOH HOH . D 3 HOH A 114 2120 2120 HOH HOH . D 3 HOH A 115 2121 2121 HOH HOH . D 3 HOH A 116 2122 2122 HOH HOH . D 3 HOH A 117 2123 2123 HOH HOH . D 3 HOH A 118 2124 2124 HOH HOH . D 3 HOH A 119 2125 2125 HOH HOH . D 3 HOH A 120 2126 2126 HOH HOH . D 3 HOH A 121 2127 2127 HOH HOH . D 3 HOH A 122 2128 2128 HOH HOH . D 3 HOH A 123 2129 2129 HOH HOH . D 3 HOH A 124 2130 2130 HOH HOH . D 3 HOH A 125 2131 2131 HOH HOH . D 3 HOH A 126 2132 2132 HOH HOH . D 3 HOH A 127 2133 2133 HOH HOH . D 3 HOH A 128 2134 2134 HOH HOH . D 3 HOH A 129 2135 2135 HOH HOH . D 3 HOH A 130 2136 2136 HOH HOH . D 3 HOH A 131 2137 2137 HOH HOH . D 3 HOH A 132 2138 2138 HOH HOH . D 3 HOH A 133 2139 2139 HOH HOH . D 3 HOH A 134 2140 2140 HOH HOH . D 3 HOH A 135 2141 2141 HOH HOH . D 3 HOH A 136 2142 2142 HOH HOH . D 3 HOH A 137 2143 2143 HOH HOH . D 3 HOH A 138 2144 2144 HOH HOH . D 3 HOH A 139 2145 2145 HOH HOH . D 3 HOH A 140 2146 2146 HOH HOH . D 3 HOH A 141 2147 2147 HOH HOH . D 3 HOH A 142 2148 2148 HOH HOH . D 3 HOH A 143 2149 2149 HOH HOH . D 3 HOH A 144 2150 2150 HOH HOH . D 3 HOH A 145 2151 2151 HOH HOH . D 3 HOH A 146 2152 2152 HOH HOH . D 3 HOH A 147 2153 2153 HOH HOH . D 3 HOH A 148 2154 2154 HOH HOH . D 3 HOH A 149 2155 2155 HOH HOH . D 3 HOH A 150 2156 2156 HOH HOH . D 3 HOH A 151 2157 2157 HOH HOH . D 3 HOH A 152 2158 2158 HOH HOH . D 3 HOH A 153 2159 2159 HOH HOH . D 3 HOH A 154 2160 2160 HOH HOH . D 3 HOH A 155 2161 2161 HOH HOH . D 3 HOH A 156 2162 2162 HOH HOH . D 3 HOH A 157 2163 2163 HOH HOH . D 3 HOH A 158 2164 2164 HOH HOH . D 3 HOH A 159 2165 2165 HOH HOH . D 3 HOH A 160 2166 2166 HOH HOH . D 3 HOH A 161 2167 2167 HOH HOH . D 3 HOH A 162 2168 2168 HOH HOH . D 3 HOH A 163 2169 2169 HOH HOH . D 3 HOH A 164 2170 2170 HOH HOH . D 3 HOH A 165 2171 2171 HOH HOH . D 3 HOH A 166 2172 2172 HOH HOH . D 3 HOH A 167 2173 2173 HOH HOH . D 3 HOH A 168 2174 2174 HOH HOH . D 3 HOH A 169 2175 2175 HOH HOH . D 3 HOH A 170 2176 2176 HOH HOH . D 3 HOH A 171 2177 2177 HOH HOH . D 3 HOH A 172 2178 2178 HOH HOH . D 3 HOH A 173 2179 2179 HOH HOH . D 3 HOH A 174 2180 2180 HOH HOH . D 3 HOH A 175 2181 2181 HOH HOH . D 3 HOH A 176 2182 2182 HOH HOH . D 3 HOH A 177 2183 2183 HOH HOH . D 3 HOH A 178 2184 2184 HOH HOH . D 3 HOH A 179 2185 2185 HOH HOH . D 3 HOH A 180 2186 2186 HOH HOH . D 3 HOH A 181 2187 2187 HOH HOH . D 3 HOH A 182 2188 2188 HOH HOH . D 3 HOH A 183 2189 2189 HOH HOH . D 3 HOH A 184 2190 2190 HOH HOH . D 3 HOH A 185 2191 2191 HOH HOH . D 3 HOH A 186 2192 2192 HOH HOH . D 3 HOH A 187 2193 2193 HOH HOH . D 3 HOH A 188 2194 2194 HOH HOH . D 3 HOH A 189 2195 2195 HOH HOH . D 3 HOH A 190 2196 2196 HOH HOH . D 3 HOH A 191 2197 2197 HOH HOH . D 3 HOH A 192 2198 2198 HOH HOH . D 3 HOH A 193 2199 2199 HOH HOH . D 3 HOH A 194 2200 2200 HOH HOH . D 3 HOH A 195 2201 2201 HOH HOH . D 3 HOH A 196 2202 2202 HOH HOH . D 3 HOH A 197 2203 2203 HOH HOH . D 3 HOH A 198 2204 2204 HOH HOH . D 3 HOH A 199 2205 2205 HOH HOH . D 3 HOH A 200 2206 2206 HOH HOH . D 3 HOH A 201 2207 2207 HOH HOH . D 3 HOH A 202 2208 2208 HOH HOH . D 3 HOH A 203 2209 2209 HOH HOH . D 3 HOH A 204 2210 2210 HOH HOH . D 3 HOH A 205 2211 2211 HOH HOH . D 3 HOH A 206 2212 2212 HOH HOH . D 3 HOH A 207 2213 2213 HOH HOH . D 3 HOH A 208 2214 2214 HOH HOH . D 3 HOH A 209 2215 2215 HOH HOH . D 3 HOH A 210 2216 2216 HOH HOH . D 3 HOH A 211 2217 2217 HOH HOH . D 3 HOH A 212 2218 2218 HOH HOH . D 3 HOH A 213 2219 2219 HOH HOH . D 3 HOH A 214 2220 2220 HOH HOH . D 3 HOH A 215 2221 2221 HOH HOH . D 3 HOH A 216 2222 2222 HOH HOH . D 3 HOH A 217 2223 2223 HOH HOH . D 3 HOH A 218 2224 2224 HOH HOH . D 3 HOH A 219 2225 2225 HOH HOH . D 3 HOH A 220 2226 2226 HOH HOH . D 3 HOH A 221 2227 2227 HOH HOH . D 3 HOH A 222 2228 2228 HOH HOH . D 3 HOH A 223 2229 2229 HOH HOH . D 3 HOH A 224 2230 2230 HOH HOH . D 3 HOH A 225 2231 2231 HOH HOH . D 3 HOH A 226 2232 2232 HOH HOH . D 3 HOH A 227 2233 2233 HOH HOH . D 3 HOH A 228 2234 2234 HOH HOH . D 3 HOH A 229 2235 2235 HOH HOH . D 3 HOH A 230 2236 2236 HOH HOH . D 3 HOH A 231 2237 2237 HOH HOH . D 3 HOH A 232 2238 2238 HOH HOH . D 3 HOH A 233 2239 2239 HOH HOH . D 3 HOH A 234 2240 2240 HOH HOH . D 3 HOH A 235 2241 2241 HOH HOH . D 3 HOH A 236 2242 2242 HOH HOH . D 3 HOH A 237 2243 2243 HOH HOH . D 3 HOH A 238 2244 2244 HOH HOH . D 3 HOH A 239 2245 2245 HOH HOH . D 3 HOH A 240 2246 2246 HOH HOH . D 3 HOH A 241 2247 2247 HOH HOH . D 3 HOH A 242 2248 2248 HOH HOH . D 3 HOH A 243 2249 2249 HOH HOH . D 3 HOH A 244 2250 2250 HOH HOH . D 3 HOH A 245 2251 2251 HOH HOH . D 3 HOH A 246 2252 2252 HOH HOH . D 3 HOH A 247 2253 2253 HOH HOH . D 3 HOH A 248 2254 2254 HOH HOH . D 3 HOH A 249 2255 2255 HOH HOH . D 3 HOH A 250 2256 2256 HOH HOH . D 3 HOH A 251 2257 2257 HOH HOH . D 3 HOH A 252 2258 2258 HOH HOH . D 3 HOH A 253 2259 2259 HOH HOH . D 3 HOH A 254 2260 2260 HOH HOH . D 3 HOH A 255 2261 2261 HOH HOH . D 3 HOH A 256 2262 2262 HOH HOH . D 3 HOH A 257 2263 2263 HOH HOH . D 3 HOH A 258 2264 2264 HOH HOH . D 3 HOH A 259 2265 2265 HOH HOH . D 3 HOH A 260 2266 2266 HOH HOH . D 3 HOH A 261 2267 2267 HOH HOH . D 3 HOH A 262 2268 2268 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 -23.008 10.07 -0.161 0.5 14.69 ? C1 GOL 502 A 1 HETATM 2 O O1 GOL . . . C 2 -22.745 9.306 1.007 0.5 15.38 ? O1 GOL 502 A 1 HETATM 3 C C2 GOL . . . C 2 -22.133 9.713 -1.338 0.5 19.79 ? C2 GOL 502 A 1 HETATM 4 O O2 GOL . . . C 2 -20.748 9.903 -1.101 0.5 18.05 ? O2 GOL 502 A 1 HETATM 5 C C3 GOL . . . C 2 -22.588 10.432 -2.599 0.5 19.25 ? C3 GOL 502 A 1 HETATM 6 O O3 GOL . . . C 2 -24.016 10.461 -2.646 0.5 31.72 ? O3 GOL 502 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #