data_3ZSV # _model_server_result.job_id 5ijG-OqcSw_-pHH8XEsIpQ _model_server_result.datetime_utc '2024-11-22 11:46:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zsv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1214}' # _entry.id 3ZSV # _exptl.entry_id 3ZSV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ZSV _cell.length_a 70.677 _cell.length_b 70.677 _cell.length_c 67.125 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZSV _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 M N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 145 n n C1 C2 GOL sing 146 n n C1 H11 GOL sing 147 n n C1 H12 GOL sing 148 n n O1 HO1 GOL sing 149 n n C2 O2 GOL sing 150 n n C2 C3 GOL sing 151 n n C2 H2 GOL sing 152 n n O2 HO2 GOL sing 153 n n C3 O3 GOL sing 154 n n C3 H31 GOL sing 155 n n C3 H32 GOL sing 156 n n O3 HO3 GOL sing 157 n n # _atom_sites.entry_id 3ZSV _atom_sites.fract_transf_matrix[1][1] 0.014149 _atom_sites.fract_transf_matrix[1][2] 0.008169 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016338 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014898 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1210 1210 SO4 SO4 . D 2 SO4 A 1 1211 1211 SO4 SO4 . E 3 ACY A 1 1212 1212 ACY ACY . F 4 EDO A 1 1213 1213 EDO EDO . G 5 GOL A 1 1214 1214 GOL GOL . H 6 ZSV A 1 1215 1215 ZSV ZSV . I 2 SO4 B 1 1210 1210 SO4 SO4 . J 2 SO4 B 1 1211 1211 SO4 SO4 . K 3 ACY B 1 1212 1212 ACY ACY . L 4 EDO B 1 1213 1213 EDO EDO . M 5 GOL B 1 1214 1214 GOL GOL . N 6 ZSV B 1 1215 1215 ZSV ZSV . O 7 HOH A 1 2001 2001 HOH HOH . O 7 HOH A 2 2002 2002 HOH HOH . O 7 HOH A 3 2003 2003 HOH HOH . O 7 HOH A 4 2004 2004 HOH HOH . O 7 HOH A 5 2005 2005 HOH HOH . O 7 HOH A 6 2006 2006 HOH HOH . O 7 HOH A 7 2007 2007 HOH HOH . O 7 HOH A 8 2008 2008 HOH HOH . O 7 HOH A 9 2009 2009 HOH HOH . O 7 HOH A 10 2010 2010 HOH HOH . O 7 HOH A 11 2011 2011 HOH HOH . O 7 HOH A 12 2012 2012 HOH HOH . O 7 HOH A 13 2013 2013 HOH HOH . O 7 HOH A 14 2014 2014 HOH HOH . O 7 HOH A 15 2015 2015 HOH HOH . O 7 HOH A 16 2016 2016 HOH HOH . O 7 HOH A 17 2017 2017 HOH HOH . O 7 HOH A 18 2018 2018 HOH HOH . O 7 HOH A 19 2019 2019 HOH HOH . O 7 HOH A 20 2020 2020 HOH HOH . O 7 HOH A 21 2021 2021 HOH HOH . O 7 HOH A 22 2022 2022 HOH HOH . O 7 HOH A 23 2023 2023 HOH HOH . O 7 HOH A 24 2024 2024 HOH HOH . O 7 HOH A 25 2025 2025 HOH HOH . O 7 HOH A 26 2026 2026 HOH HOH . O 7 HOH A 27 2027 2027 HOH HOH . O 7 HOH A 28 2028 2028 HOH HOH . O 7 HOH A 29 2029 2029 HOH HOH . O 7 HOH A 30 2030 2030 HOH HOH . O 7 HOH A 31 2031 2031 HOH HOH . O 7 HOH A 32 2032 2032 HOH HOH . O 7 HOH A 33 2033 2033 HOH HOH . O 7 HOH A 34 2034 2034 HOH HOH . O 7 HOH A 35 2035 2035 HOH HOH . O 7 HOH A 36 2036 2036 HOH HOH . O 7 HOH A 37 2037 2037 HOH HOH . O 7 HOH A 38 2038 2038 HOH HOH . O 7 HOH A 39 2039 2039 HOH HOH . O 7 HOH A 40 2040 2040 HOH HOH . O 7 HOH A 41 2041 2041 HOH HOH . O 7 HOH A 42 2042 2042 HOH HOH . O 7 HOH A 43 2043 2043 HOH HOH . O 7 HOH A 44 2044 2044 HOH HOH . O 7 HOH A 45 2045 2045 HOH HOH . O 7 HOH A 46 2046 2046 HOH HOH . O 7 HOH A 47 2047 2047 HOH HOH . O 7 HOH A 48 2048 2048 HOH HOH . O 7 HOH A 49 2049 2049 HOH HOH . O 7 HOH A 50 2050 2050 HOH HOH . O 7 HOH A 51 2051 2051 HOH HOH . O 7 HOH A 52 2052 2052 HOH HOH . O 7 HOH A 53 2053 2053 HOH HOH . O 7 HOH A 54 2054 2054 HOH HOH . O 7 HOH A 55 2055 2055 HOH HOH . O 7 HOH A 56 2056 2056 HOH HOH . O 7 HOH A 57 2057 2057 HOH HOH . O 7 HOH A 58 2058 2058 HOH HOH . O 7 HOH A 59 2059 2059 HOH HOH . O 7 HOH A 60 2060 2060 HOH HOH . O 7 HOH A 61 2061 2061 HOH HOH . O 7 HOH A 62 2062 2062 HOH HOH . O 7 HOH A 63 2063 2063 HOH HOH . O 7 HOH A 64 2064 2064 HOH HOH . O 7 HOH A 65 2065 2065 HOH HOH . O 7 HOH A 66 2066 2066 HOH HOH . O 7 HOH A 67 2067 2067 HOH HOH . O 7 HOH A 68 2068 2068 HOH HOH . O 7 HOH A 69 2069 2069 HOH HOH . O 7 HOH A 70 2070 2070 HOH HOH . O 7 HOH A 71 2071 2071 HOH HOH . P 7 HOH B 1 2001 2001 HOH HOH . P 7 HOH B 2 2002 2002 HOH HOH . P 7 HOH B 3 2003 2003 HOH HOH . P 7 HOH B 4 2004 2004 HOH HOH . P 7 HOH B 5 2005 2005 HOH HOH . P 7 HOH B 6 2006 2006 HOH HOH . P 7 HOH B 7 2007 2007 HOH HOH . P 7 HOH B 8 2008 2008 HOH HOH . P 7 HOH B 9 2009 2009 HOH HOH . P 7 HOH B 10 2010 2010 HOH HOH . P 7 HOH B 11 2011 2011 HOH HOH . P 7 HOH B 12 2012 2012 HOH HOH . P 7 HOH B 13 2013 2013 HOH HOH . P 7 HOH B 14 2014 2014 HOH HOH . P 7 HOH B 15 2015 2015 HOH HOH . P 7 HOH B 16 2016 2016 HOH HOH . P 7 HOH B 17 2017 2017 HOH HOH . P 7 HOH B 18 2018 2018 HOH HOH . P 7 HOH B 19 2019 2019 HOH HOH . P 7 HOH B 20 2020 2020 HOH HOH . P 7 HOH B 21 2021 2021 HOH HOH . P 7 HOH B 22 2022 2022 HOH HOH . P 7 HOH B 23 2023 2023 HOH HOH . P 7 HOH B 24 2024 2024 HOH HOH . P 7 HOH B 25 2025 2025 HOH HOH . P 7 HOH B 26 2026 2026 HOH HOH . P 7 HOH B 27 2027 2027 HOH HOH . P 7 HOH B 28 2028 2028 HOH HOH . P 7 HOH B 29 2029 2029 HOH HOH . P 7 HOH B 30 2030 2030 HOH HOH . P 7 HOH B 31 2031 2031 HOH HOH . P 7 HOH B 32 2032 2032 HOH HOH . P 7 HOH B 33 2033 2033 HOH HOH . P 7 HOH B 34 2034 2034 HOH HOH . P 7 HOH B 35 2035 2035 HOH HOH . P 7 HOH B 36 2036 2036 HOH HOH . P 7 HOH B 37 2037 2037 HOH HOH . P 7 HOH B 38 2038 2038 HOH HOH . P 7 HOH B 39 2039 2039 HOH HOH . P 7 HOH B 40 2040 2040 HOH HOH . P 7 HOH B 41 2041 2041 HOH HOH . P 7 HOH B 42 2042 2042 HOH HOH . P 7 HOH B 43 2043 2043 HOH HOH . P 7 HOH B 44 2044 2044 HOH HOH . P 7 HOH B 45 2045 2045 HOH HOH . P 7 HOH B 46 2046 2046 HOH HOH . P 7 HOH B 47 2047 2047 HOH HOH . P 7 HOH B 48 2048 2048 HOH HOH . P 7 HOH B 49 2049 2049 HOH HOH . P 7 HOH B 50 2050 2050 HOH HOH . P 7 HOH B 51 2051 2051 HOH HOH . P 7 HOH B 52 2052 2052 HOH HOH . P 7 HOH B 53 2053 2053 HOH HOH . P 7 HOH B 54 2054 2054 HOH HOH . P 7 HOH B 55 2055 2055 HOH HOH . P 7 HOH B 56 2056 2056 HOH HOH . P 7 HOH B 57 2057 2057 HOH HOH . P 7 HOH B 58 2058 2058 HOH HOH . P 7 HOH B 59 2059 2059 HOH HOH . P 7 HOH B 60 2060 2060 HOH HOH . P 7 HOH B 61 2061 2061 HOH HOH . P 7 HOH B 62 2062 2062 HOH HOH . P 7 HOH B 63 2063 2063 HOH HOH . P 7 HOH B 64 2064 2064 HOH HOH . P 7 HOH B 65 2065 2065 HOH HOH . P 7 HOH B 66 2066 2066 HOH HOH . P 7 HOH B 67 2067 2067 HOH HOH . P 7 HOH B 68 2068 2068 HOH HOH . P 7 HOH B 69 2069 2069 HOH HOH . P 7 HOH B 70 2070 2070 HOH HOH . P 7 HOH B 71 2071 2071 HOH HOH . P 7 HOH B 72 2072 2072 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . M 5 12.626 39.182 7.264 1 39.84 ? C1 GOL 1214 B 1 HETATM 2 O O1 GOL . . . M 5 12.45 37.778 7.137 1 41.72 ? O1 GOL 1214 B 1 HETATM 3 C C2 GOL . . . M 5 11.34 39.924 7.647 1 36.42 ? C2 GOL 1214 B 1 HETATM 4 O O2 GOL . . . M 5 10.92 39.381 8.882 1 36.29 ? O2 GOL 1214 B 1 HETATM 5 C C3 GOL . . . M 5 11.727 41.396 7.798 1 35.57 ? C3 GOL 1214 B 1 HETATM 6 O O3 GOL . . . M 5 10.65 42.282 8.078 1 32.19 ? O3 GOL 1214 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #