data_3ZSW # _model_server_result.job_id FNqc_hlp4nKo2hF3yj73LQ _model_server_result.datetime_utc '2024-11-08 04:39:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zsw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":307}' # _entry.id 3ZSW # _exptl.entry_id 3ZSW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 511.587 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (R)-[2-[[(2R)-butan-2-yl]carbamoyl]phenyl]methyl-[[(2S)-5-carboxy-2-(2-carboxyethyl)-2,3-dihydro-1,4-benzodioxin-6-yl]methyl]-prop-2-enyl-azanium _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ZSW _cell.length_a 70.999 _cell.length_b 70.999 _cell.length_c 66.602 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZSW _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 J N N ? 7 Q N N # _chem_comp.formula 'C28 H35 N2 O7 1' _chem_comp.formula_weight 511.587 _chem_comp.id ZSW _chem_comp.mon_nstd_flag . _chem_comp.name (R)-[2-[[(2R)-butan-2-yl]carbamoyl]phenyl]methyl-[[(2S)-5-carboxy-2-(2-carboxyethyl)-2,3-dihydro-1,4-benzodioxin-6-yl]methyl]-prop-2-enyl-azanium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ZSW sing 400 n y C1 C3 ZSW doub 401 n y C2 C4 ZSW doub 402 n y C3 C7 ZSW sing 403 n y C4 C9 ZSW sing 404 n y C5 C6 ZSW sing 405 n y C5 C10 ZSW doub 406 n y C6 C11 ZSW doub 407 n y C7 C9 ZSW doub 408 n y C7 C15 ZSW sing 409 n n C8 C10 ZSW sing 410 n y C8 C12 ZSW doub 411 n y C8 C16 ZSW sing 412 n n C9 C26 ZSW sing 413 n n C10 C27 ZSW sing 414 n n C11 C12 ZSW sing 415 n y C11 O40 ZSW sing 416 n n C12 O39 ZSW sing 417 n n C13 C14 ZSW doub 418 n n C14 C28 ZSW sing 419 n n C15 N32 ZSW sing 420 n n C15 O36 ZSW doub 421 n n C16 O34 ZSW doub 422 n n C16 O37 ZSW sing 423 n n C17 C29 ZSW sing 424 n n C17 O35 ZSW doub 425 n n C17 O38 ZSW sing 426 n n C18 C20 ZSW sing 427 n n C18 C19 ZSW sing 428 n n C20 C22 ZSW sing 429 n n C20 N32 ZSW sing 430 n n C23 C25 ZSW sing 431 n n C23 O39 ZSW sing 432 n n C25 C31 ZSW sing 433 n n C25 O40 ZSW sing 434 n n C26 N33 ZSW sing 435 n n C27 N33 ZSW sing 436 n n C28 N33 ZSW sing 437 n n C29 C31 ZSW sing 438 n n C1 H1 ZSW sing 439 n n C2 H2 ZSW sing 440 n n C3 H3 ZSW sing 441 n n C4 H4 ZSW sing 442 n n C5 H5 ZSW sing 443 n n C6 H6 ZSW sing 444 n n C26 H261 ZSW sing 445 n n C26 H262 ZSW sing 446 n n C27 H271 ZSW sing 447 n n C27 H272 ZSW sing 448 n n C13 H131 ZSW sing 449 n n C13 H132 ZSW sing 450 n n C14 H14 ZSW sing 451 n n C28 H281 ZSW sing 452 n n C28 H282 ZSW sing 453 n n N32 H32 ZSW sing 454 n n O37 H37 ZSW sing 455 n n C29 H291 ZSW sing 456 n n C29 H292 ZSW sing 457 n n O38 H38 ZSW sing 458 n n C18 H181 ZSW sing 459 n n C18 H182 ZSW sing 460 n n C20 H20 ZSW sing 461 n n C19 H191 ZSW sing 462 n n C19 H192 ZSW sing 463 n n C19 H193 ZSW sing 464 n n C22 H221 ZSW sing 465 n n C22 H222 ZSW sing 466 n n C22 H223 ZSW sing 467 n n C23 H231 ZSW sing 468 n n C23 H232 ZSW sing 469 n n C25 H25 ZSW sing 470 n n C31 H311 ZSW sing 471 n n C31 H312 ZSW sing 472 n n N33 H33 ZSW sing 473 n n # _atom_sites.entry_id 3ZSW _atom_sites.fract_transf_matrix[1][1] 0.014085 _atom_sites.fract_transf_matrix[1][2] 0.008132 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016264 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015015 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 THR A 1 301 210 THR THR . D 3 SO4 A 1 302 1211 SO4 SO4 . E 3 SO4 A 1 303 1212 SO4 SO4 . F 3 SO4 A 1 304 1213 SO4 SO4 . G 4 CL A 1 305 1214 CL CL . H 5 ACY A 1 306 1215 ACY ACY . I 6 GOL A 1 307 1216 GOL GOL . J 7 ZSW A 1 308 1217 ZSW ZSW . K 2 THR B 1 301 210 THR THR . L 3 SO4 B 1 302 1211 SO4 SO4 . M 3 SO4 B 1 303 1212 SO4 SO4 . N 3 SO4 B 1 304 1213 SO4 SO4 . O 4 CL B 1 305 1214 CL CL . P 6 GOL B 1 306 1215 GOL GOL . Q 7 ZSW B 1 307 1216 ZSW ZSW . R 8 HOH A 1 401 2046 HOH HOH . R 8 HOH A 2 402 2017 HOH HOH . R 8 HOH A 3 403 2009 HOH HOH . R 8 HOH A 4 404 2015 HOH HOH . R 8 HOH A 5 405 2064 HOH HOH . R 8 HOH A 6 406 2034 HOH HOH . R 8 HOH A 7 407 2045 HOH HOH . R 8 HOH A 8 408 2003 HOH HOH . R 8 HOH A 9 409 2019 HOH HOH . R 8 HOH A 10 410 2038 HOH HOH . R 8 HOH A 11 411 2059 HOH HOH . R 8 HOH A 12 412 2025 HOH HOH . R 8 HOH A 13 413 2002 HOH HOH . R 8 HOH A 14 414 2018 HOH HOH . R 8 HOH A 15 415 2054 HOH HOH . R 8 HOH A 16 416 2021 HOH HOH . R 8 HOH A 17 417 2044 HOH HOH . R 8 HOH A 18 418 2014 HOH HOH . R 8 HOH A 19 419 2027 HOH HOH . R 8 HOH A 20 420 2056 HOH HOH . R 8 HOH A 21 421 2035 HOH HOH . R 8 HOH A 22 422 2055 HOH HOH . R 8 HOH A 23 423 2042 HOH HOH . R 8 HOH A 24 424 2008 HOH HOH . R 8 HOH A 25 425 2043 HOH HOH . R 8 HOH A 26 426 2022 HOH HOH . R 8 HOH A 27 427 2007 HOH HOH . R 8 HOH A 28 428 2067 HOH HOH . R 8 HOH A 29 429 2033 HOH HOH . R 8 HOH A 30 430 2057 HOH HOH . R 8 HOH A 31 431 2048 HOH HOH . R 8 HOH A 32 432 2049 HOH HOH . R 8 HOH A 33 433 2061 HOH HOH . R 8 HOH A 34 434 2063 HOH HOH . R 8 HOH A 35 435 2068 HOH HOH . R 8 HOH A 36 436 2037 HOH HOH . R 8 HOH A 37 437 2062 HOH HOH . R 8 HOH A 38 438 2005 HOH HOH . R 8 HOH A 39 439 2053 HOH HOH . R 8 HOH A 40 440 2051 HOH HOH . R 8 HOH A 41 441 2052 HOH HOH . R 8 HOH A 42 442 2060 HOH HOH . R 8 HOH A 43 443 2026 HOH HOH . R 8 HOH A 44 444 2069 HOH HOH . R 8 HOH A 45 445 2001 HOH HOH . R 8 HOH A 46 446 2050 HOH HOH . R 8 HOH A 47 447 2006 HOH HOH . R 8 HOH A 48 448 2016 HOH HOH . R 8 HOH A 49 449 2039 HOH HOH . R 8 HOH A 50 450 2024 HOH HOH . R 8 HOH A 51 451 2047 HOH HOH . R 8 HOH A 52 452 2036 HOH HOH . R 8 HOH A 53 453 2010 HOH HOH . R 8 HOH A 54 454 2028 HOH HOH . R 8 HOH A 55 455 2023 HOH HOH . R 8 HOH A 56 456 2066 HOH HOH . R 8 HOH A 57 457 2004 HOH HOH . R 8 HOH A 58 458 2012 HOH HOH . R 8 HOH A 59 459 2011 HOH HOH . R 8 HOH A 60 460 2029 HOH HOH . R 8 HOH A 61 461 2040 HOH HOH . R 8 HOH A 62 462 2020 HOH HOH . R 8 HOH A 63 463 2020 HOH HOH . R 8 HOH A 64 464 2041 HOH HOH . R 8 HOH A 65 465 2013 HOH HOH . S 8 HOH B 1 401 2012 HOH HOH . S 8 HOH B 2 402 2039 HOH HOH . S 8 HOH B 3 403 2031 HOH HOH . S 8 HOH B 4 404 2031 HOH HOH . S 8 HOH B 5 405 2047 HOH HOH . S 8 HOH B 6 406 2018 HOH HOH . S 8 HOH B 7 407 2044 HOH HOH . S 8 HOH B 8 408 2021 HOH HOH . S 8 HOH B 9 409 2009 HOH HOH . S 8 HOH B 10 410 2049 HOH HOH . S 8 HOH B 11 411 2002 HOH HOH . S 8 HOH B 12 412 2025 HOH HOH . S 8 HOH B 13 413 2022 HOH HOH . S 8 HOH B 14 414 2030 HOH HOH . S 8 HOH B 15 415 2030 HOH HOH . S 8 HOH B 16 416 2041 HOH HOH . S 8 HOH B 17 417 2071 HOH HOH . S 8 HOH B 18 418 2042 HOH HOH . S 8 HOH B 19 419 2014 HOH HOH . S 8 HOH B 20 420 2050 HOH HOH . S 8 HOH B 21 421 2008 HOH HOH . S 8 HOH B 22 422 2043 HOH HOH . S 8 HOH B 23 423 2024 HOH HOH . S 8 HOH B 24 424 2029 HOH HOH . S 8 HOH B 25 425 2070 HOH HOH . S 8 HOH B 26 426 2065 HOH HOH . S 8 HOH B 27 427 2046 HOH HOH . S 8 HOH B 28 428 2040 HOH HOH . S 8 HOH B 29 429 2028 HOH HOH . S 8 HOH B 30 430 2058 HOH HOH . S 8 HOH B 31 431 2048 HOH HOH . S 8 HOH B 32 432 2045 HOH HOH . S 8 HOH B 33 433 2007 HOH HOH . S 8 HOH B 34 434 2032 HOH HOH . S 8 HOH B 35 435 2052 HOH HOH . S 8 HOH B 36 436 2004 HOH HOH . S 8 HOH B 37 437 2017 HOH HOH . S 8 HOH B 38 438 2001 HOH HOH . S 8 HOH B 39 439 2035 HOH HOH . S 8 HOH B 40 440 2034 HOH HOH . S 8 HOH B 41 441 2037 HOH HOH . S 8 HOH B 42 442 2006 HOH HOH . S 8 HOH B 43 443 2051 HOH HOH . S 8 HOH B 44 444 2036 HOH HOH . S 8 HOH B 45 445 2038 HOH HOH . S 8 HOH B 46 446 2011 HOH HOH . S 8 HOH B 47 447 2003 HOH HOH . S 8 HOH B 48 448 2016 HOH HOH . S 8 HOH B 49 449 2032 HOH HOH . S 8 HOH B 50 450 2026 HOH HOH . S 8 HOH B 51 451 2033 HOH HOH . S 8 HOH B 52 452 2023 HOH HOH . S 8 HOH B 53 453 2015 HOH HOH . S 8 HOH B 54 454 2005 HOH HOH . S 8 HOH B 55 455 2010 HOH HOH . S 8 HOH B 56 456 2019 HOH HOH . S 8 HOH B 57 457 2027 HOH HOH . S 8 HOH B 58 458 2013 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ZSW . . . Q 7 -36.282 32.389 -19.082 1 31.06 ? C1 ZSW 307 B 1 HETATM 2 C C2 ZSW . . . Q 7 -36.649 33.576 -18.482 1 31.73 ? C2 ZSW 307 B 1 HETATM 3 C C3 ZSW . . . Q 7 -36.064 31.261 -18.322 1 30.17 ? C3 ZSW 307 B 1 HETATM 4 C C4 ZSW . . . Q 7 -36.793 33.64 -17.115 1 30.28 ? C4 ZSW 307 B 1 HETATM 5 C C5 ZSW . . . Q 7 -33.131 32.583 -11.94 1 20.4 ? C5 ZSW 307 B 1 HETATM 6 C C6 ZSW . . . Q 7 -32.306 33.164 -11 1 20.12 ? C6 ZSW 307 B 1 HETATM 7 C C7 ZSW . . . Q 7 -36.205 31.331 -16.957 1 31.45 ? C7 ZSW 307 B 1 HETATM 8 C C8 ZSW . . . Q 7 -32.689 34.355 -13.518 1 20.15 ? C8 ZSW 307 B 1 HETATM 9 C C9 ZSW . . . Q 7 -36.568 32.518 -16.35 1 30.37 ? C9 ZSW 307 B 1 HETATM 10 C C10 ZSW . . . Q 7 -33.332 33.163 -13.183 1 21.42 ? C10 ZSW 307 B 1 HETATM 11 C C11 ZSW . . . Q 7 -31.69 34.351 -11.324 1 19.22 ? C11 ZSW 307 B 1 HETATM 12 C C12 ZSW . . . Q 7 -31.854 34.937 -12.572 1 18.64 ? C12 ZSW 307 B 1 HETATM 13 C C13 ZSW . . . Q 7 -38.014 33.98 -11.835 1 37.34 ? C13 ZSW 307 B 1 HETATM 14 C C14 ZSW . . . Q 7 -36.809 33.485 -12.145 1 33.64 ? C14 ZSW 307 B 1 HETATM 15 C C15 ZSW . . . Q 7 -35.93 30.11 -16.165 1 33.51 ? C15 ZSW 307 B 1 HETATM 16 C C16 ZSW . . . Q 7 -32.856 34.97 -14.862 1 21.61 ? C16 ZSW 307 B 1 HETATM 17 C C17 ZSW . . . Q 7 -30.965 37.381 -7.749 1 26.29 ? C17 ZSW 307 B 1 HETATM 18 C C19 ZSW . . . Q 7 -32.173 29.069 -14.854 1 34.84 ? C19 ZSW 307 B 1 HETATM 19 C C18 ZSW . . . Q 7 -33.404 28.195 -14.925 1 36.47 ? C18 ZSW 307 B 1 HETATM 20 C C20 ZSW . . . Q 7 -34.069 28.318 -16.271 1 36.27 ? C20 ZSW 307 B 1 HETATM 21 C C22 ZSW . . . Q 7 -34.989 27.14 -16.523 1 36.88 ? C22 ZSW 307 B 1 HETATM 22 C C23 ZSW . . . Q 7 -30.166 36.474 -12.015 1 20.85 ? C23 ZSW 307 B 1 HETATM 23 C C25 ZSW . . . Q 7 -30.636 36.283 -10.596 1 21.99 ? C25 ZSW 307 B 1 HETATM 24 C C26 ZSW . . . Q 7 -36.719 32.632 -14.878 1 30.7 ? C26 ZSW 307 B 1 HETATM 25 C C27 ZSW . . . Q 7 -34.272 32.472 -14.126 1 22.62 ? C27 ZSW 307 B 1 HETATM 26 C C28 ZSW . . . Q 7 -35.966 34.171 -13.136 1 30.73 ? C28 ZSW 307 B 1 HETATM 27 C C29 ZSW . . . Q 7 -29.889 36.408 -8.212 1 23.43 ? C29 ZSW 307 B 1 HETATM 28 C C31 ZSW . . . Q 7 -29.562 36.796 -9.639 1 22.46 ? C31 ZSW 307 B 1 HETATM 29 N N32 ZSW . . . Q 7 -34.674 29.622 -16.473 1 32.45 ? N32 ZSW 307 B 1 HETATM 30 N N33 ZSW . . . Q 7 -35.53 33.319 -14.286 1 29.91 ? N33 ZSW 307 B 1 HETATM 31 O O37 ZSW . . . Q 7 -31.79 35.358 -15.441 1 18.75 ? O37 ZSW 307 B 1 HETATM 32 O O35 ZSW . . . Q 7 -30.852 38.582 -8.11 1 29.77 ? O35 ZSW 307 B 1 HETATM 33 O O36 ZSW . . . Q 7 -36.718 29.698 -15.327 1 34.63 ? O36 ZSW 307 B 1 HETATM 34 O O34 ZSW . . . Q 7 -33.995 34.986 -15.398 1 22 ? O34 ZSW 307 B 1 HETATM 35 O O38 ZSW . . . Q 7 -31.868 36.88 -7.026 1 25.15 ? O38 ZSW 307 B 1 HETATM 36 O O39 ZSW . . . Q 7 -31.244 36.141 -12.896 1 19.35 ? O39 ZSW 307 B 1 HETATM 37 O O40 ZSW . . . Q 7 -30.878 34.89 -10.36 1 20.32 ? O40 ZSW 307 B 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 37 #