data_3ZT4 # _model_server_result.job_id gGPNo4B3-YeK2yHLLl_LRQ _model_server_result.datetime_utc '2024-11-08 07:11:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zt4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1215}' # _entry.id 3ZT4 # _exptl.entry_id 3ZT4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 308.285 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[(E)-(2-OXO-2,3-DIHYDRO-1H-INDEN-1-YLIDENE)METHYL]-1,3-BENZODIOXOLE-4-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ZT4 _cell.length_a 71.058 _cell.length_b 71.058 _cell.length_c 66.559 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZT4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N ? 5 N N N ? 5 O N N # _chem_comp.formula 'C18 H12 O5' _chem_comp.formula_weight 308.285 _chem_comp.id ZT2 _chem_comp.mon_nstd_flag . _chem_comp.name '5-[(E)-(2-OXO-2,3-DIHYDRO-1H-INDEN-1-YLIDENE)METHYL]-1,3-BENZODIOXOLE-4-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ZT2 sing 396 n y C1 C3 ZT2 doub 397 n y C2 C5 ZT2 doub 398 n y C3 C7 ZT2 sing 399 n y C4 C6 ZT2 sing 400 n y C4 C8 ZT2 doub 401 n y C5 C10 ZT2 sing 402 n y C6 C11 ZT2 doub 403 n y C7 C10 ZT2 doub 404 n y C7 C13 ZT2 sing 405 n n C8 C9 ZT2 sing 406 n y C8 C15 ZT2 sing 407 n n C9 C12 ZT2 doub 408 n y C9 C16 ZT2 sing 409 n n C10 C17 ZT2 sing 410 n n C11 C12 ZT2 sing 411 n y C11 O22 ZT2 sing 412 n n C12 O23 ZT2 sing 413 n n C13 C14 ZT2 sing 414 n n C13 C15 ZT2 doub 415 e n C14 C17 ZT2 sing 416 n n C14 O20 ZT2 doub 417 n n C16 O19 ZT2 sing 418 n n C16 O21 ZT2 doub 419 n n C18 O22 ZT2 sing 420 n n C18 O23 ZT2 sing 421 n n C1 H1 ZT2 sing 422 n n C2 H2 ZT2 sing 423 n n C3 H3 ZT2 sing 424 n n C5 H5 ZT2 sing 425 n n C4 H4 ZT2 sing 426 n n C6 H6 ZT2 sing 427 n n C15 H15 ZT2 sing 428 n n C17 H171 ZT2 sing 429 n n C17 H172 ZT2 sing 430 n n O19 H19 ZT2 sing 431 n n C18 H181 ZT2 sing 432 n n C18 H182 ZT2 sing 433 n n # _atom_sites.entry_id 3ZT4 _atom_sites.fract_transf_matrix[1][1] 0.014073 _atom_sites.fract_transf_matrix[1][2] 0.008125 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01625 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015024 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1211 1211 SO4 SO4 . D 2 SO4 A 1 1212 1212 SO4 SO4 . E 2 SO4 A 1 1213 1213 SO4 SO4 . F 3 ACY A 1 1214 1214 ACY ACY . G 4 EDO A 1 1215 1215 EDO EDO . H 5 ZT2 A 1 1216 1216 ZT2 ZT2 . I 5 ZT2 A 1 1217 1217 ZT2 ZT2 . J 2 SO4 B 1 1210 1210 SO4 SO4 . K 2 SO4 B 1 1211 1211 SO4 SO4 . L 2 SO4 B 1 1212 1212 SO4 SO4 . M 3 ACY B 1 1213 1213 ACY ACY . N 5 ZT2 B 1 1214 1214 ZT2 ZT2 . O 5 ZT2 B 1 1215 1215 ZT2 ZT2 . P 6 HOH A 1 2001 2001 HOH HOH . P 6 HOH A 2 2002 2002 HOH HOH . P 6 HOH A 3 2003 2003 HOH HOH . P 6 HOH A 4 2004 2004 HOH HOH . P 6 HOH A 5 2005 2005 HOH HOH . P 6 HOH A 6 2006 2006 HOH HOH . P 6 HOH A 7 2007 2007 HOH HOH . P 6 HOH A 8 2008 2008 HOH HOH . P 6 HOH A 9 2009 2009 HOH HOH . P 6 HOH A 10 2010 2010 HOH HOH . P 6 HOH A 11 2011 2011 HOH HOH . P 6 HOH A 12 2012 2012 HOH HOH . P 6 HOH A 13 2013 2013 HOH HOH . P 6 HOH A 14 2014 2014 HOH HOH . P 6 HOH A 15 2015 2015 HOH HOH . P 6 HOH A 16 2016 2016 HOH HOH . P 6 HOH A 17 2017 2017 HOH HOH . P 6 HOH A 18 2018 2018 HOH HOH . P 6 HOH A 19 2019 2019 HOH HOH . P 6 HOH A 20 2020 2020 HOH HOH . P 6 HOH A 21 2021 2021 HOH HOH . P 6 HOH A 22 2022 2022 HOH HOH . P 6 HOH A 23 2023 2023 HOH HOH . P 6 HOH A 24 2024 2024 HOH HOH . P 6 HOH A 25 2025 2025 HOH HOH . P 6 HOH A 26 2026 2026 HOH HOH . P 6 HOH A 27 2027 2027 HOH HOH . P 6 HOH A 28 2028 2028 HOH HOH . P 6 HOH A 29 2029 2029 HOH HOH . P 6 HOH A 30 2030 2030 HOH HOH . P 6 HOH A 31 2031 2031 HOH HOH . P 6 HOH A 32 2032 2032 HOH HOH . P 6 HOH A 33 2033 2033 HOH HOH . P 6 HOH A 34 2034 2034 HOH HOH . P 6 HOH A 35 2035 2035 HOH HOH . P 6 HOH A 36 2036 2036 HOH HOH . P 6 HOH A 37 2037 2037 HOH HOH . P 6 HOH A 38 2038 2038 HOH HOH . P 6 HOH A 39 2039 2039 HOH HOH . P 6 HOH A 40 2040 2040 HOH HOH . P 6 HOH A 41 2041 2041 HOH HOH . P 6 HOH A 42 2042 2042 HOH HOH . P 6 HOH A 43 2043 2043 HOH HOH . P 6 HOH A 44 2044 2044 HOH HOH . P 6 HOH A 45 2045 2045 HOH HOH . P 6 HOH A 46 2046 2046 HOH HOH . P 6 HOH A 47 2047 2047 HOH HOH . P 6 HOH A 48 2048 2048 HOH HOH . P 6 HOH A 49 2049 2049 HOH HOH . P 6 HOH A 50 2050 2050 HOH HOH . P 6 HOH A 51 2051 2051 HOH HOH . P 6 HOH A 52 2052 2052 HOH HOH . P 6 HOH A 53 2053 2053 HOH HOH . P 6 HOH A 54 2054 2054 HOH HOH . P 6 HOH A 55 2055 2055 HOH HOH . P 6 HOH A 56 2056 2056 HOH HOH . P 6 HOH A 57 2057 2057 HOH HOH . Q 6 HOH B 1 2001 2001 HOH HOH . Q 6 HOH B 2 2002 2002 HOH HOH . Q 6 HOH B 3 2003 2003 HOH HOH . Q 6 HOH B 4 2004 2004 HOH HOH . Q 6 HOH B 5 2005 2005 HOH HOH . Q 6 HOH B 6 2006 2006 HOH HOH . Q 6 HOH B 7 2007 2007 HOH HOH . Q 6 HOH B 8 2008 2008 HOH HOH . Q 6 HOH B 9 2009 2009 HOH HOH . Q 6 HOH B 10 2010 2010 HOH HOH . Q 6 HOH B 11 2011 2011 HOH HOH . Q 6 HOH B 12 2012 2012 HOH HOH . Q 6 HOH B 13 2013 2013 HOH HOH . Q 6 HOH B 14 2014 2014 HOH HOH . Q 6 HOH B 15 2015 2015 HOH HOH . Q 6 HOH B 16 2016 2016 HOH HOH . Q 6 HOH B 17 2017 2017 HOH HOH . Q 6 HOH B 18 2018 2018 HOH HOH . Q 6 HOH B 19 2019 2019 HOH HOH . Q 6 HOH B 20 2020 2020 HOH HOH . Q 6 HOH B 21 2021 2021 HOH HOH . Q 6 HOH B 22 2022 2022 HOH HOH . Q 6 HOH B 23 2023 2023 HOH HOH . Q 6 HOH B 24 2024 2024 HOH HOH . Q 6 HOH B 25 2025 2025 HOH HOH . Q 6 HOH B 26 2026 2026 HOH HOH . Q 6 HOH B 27 2027 2027 HOH HOH . Q 6 HOH B 28 2028 2028 HOH HOH . Q 6 HOH B 29 2029 2029 HOH HOH . Q 6 HOH B 30 2030 2030 HOH HOH . Q 6 HOH B 31 2031 2031 HOH HOH . Q 6 HOH B 32 2032 2032 HOH HOH . Q 6 HOH B 33 2033 2033 HOH HOH . Q 6 HOH B 34 2034 2034 HOH HOH . Q 6 HOH B 35 2035 2035 HOH HOH . Q 6 HOH B 36 2036 2036 HOH HOH . Q 6 HOH B 37 2037 2037 HOH HOH . Q 6 HOH B 38 2038 2038 HOH HOH . Q 6 HOH B 39 2039 2039 HOH HOH . Q 6 HOH B 40 2040 2040 HOH HOH . Q 6 HOH B 41 2041 2041 HOH HOH . Q 6 HOH B 42 2042 2042 HOH HOH . Q 6 HOH B 43 2043 2043 HOH HOH . Q 6 HOH B 44 2044 2044 HOH HOH . Q 6 HOH B 45 2045 2045 HOH HOH . Q 6 HOH B 46 2046 2046 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ZT2 . . . O 5 -8.613 25.599 12.664 0.7 28.77 ? C1 ZT2 1215 B 1 HETATM 2 C C2 ZT2 . . . O 5 -9.629 25.201 11.828 0.7 26.6 ? C2 ZT2 1215 B 1 HETATM 3 C C3 ZT2 . . . O 5 -7.471 24.851 12.79 0.7 27.94 ? C3 ZT2 1215 B 1 HETATM 4 C C4 ZT2 . . . O 5 -5.316 23.375 14.834 0.7 33.52 ? C4 ZT2 1215 B 1 HETATM 5 C C5 ZT2 . . . O 5 -9.51 24.044 11.099 0.7 27.35 ? C5 ZT2 1215 B 1 HETATM 6 C C6 ZT2 . . . O 5 -4.815 24.028 15.936 0.7 36.74 ? C6 ZT2 1215 B 1 HETATM 7 C C7 ZT2 . . . O 5 -7.358 23.698 12.063 0.7 29.04 ? C7 ZT2 1215 B 1 HETATM 8 C C8 ZT2 . . . O 5 -4.526 23.228 13.706 0.7 35.53 ? C8 ZT2 1215 B 1 HETATM 9 C C9 ZT2 . . . O 5 -3.22 23.7 13.673 0.7 35.91 ? C9 ZT2 1215 B 1 HETATM 10 C C10 ZT2 . . . O 5 -8.363 23.304 11.225 0.7 28.28 ? C10 ZT2 1215 B 1 HETATM 11 C C11 ZT2 . . . O 5 -3.534 24.512 15.895 0.7 37.18 ? C11 ZT2 1215 B 1 HETATM 12 C C12 ZT2 . . . O 5 -2.741 24.356 14.784 0.7 39.57 ? C12 ZT2 1215 B 1 HETATM 13 C C13 ZT2 . . . O 5 -6.306 22.712 11.977 0.7 28.97 ? C13 ZT2 1215 B 1 HETATM 14 C C14 ZT2 . . . O 5 -6.668 21.721 10.974 0.7 29.43 ? C14 ZT2 1215 B 1 HETATM 15 C C15 ZT2 . . . O 5 -5.132 22.488 12.592 0.7 34.43 ? C15 ZT2 1215 B 1 HETATM 16 C C16 ZT2 . . . O 5 -2.348 23.544 12.502 0.7 39.94 ? C16 ZT2 1215 B 1 HETATM 17 C C17 ZT2 . . . O 5 -8.064 22.048 10.506 0.7 26.93 ? C17 ZT2 1215 B 1 HETATM 18 C C18 ZT2 . . . O 5 -1.768 25.708 16.141 0.7 43.37 ? C18 ZT2 1215 B 1 HETATM 19 O O19 ZT2 . . . O 5 -2.118 22.355 12.148 0.7 42.68 ? O19 ZT2 1215 B 1 HETATM 20 O O20 ZT2 . . . O 5 -5.936 20.79 10.605 0.7 30.59 ? O20 ZT2 1215 B 1 HETATM 21 O O21 ZT2 . . . O 5 -1.894 24.599 11.977 0.7 40.93 ? O21 ZT2 1215 B 1 HETATM 22 O O22 ZT2 . . . O 5 -2.915 25.195 16.906 0.7 40.88 ? O22 ZT2 1215 B 1 HETATM 23 O O23 ZT2 . . . O 5 -1.481 24.93 14.939 0.7 40.68 ? O23 ZT2 1215 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 23 #