data_3ZTD # _model_server_result.job_id pA2ZyDnfzOYA8jo3Ium6bg _model_server_result.datetime_utc '2025-03-08 06:55:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ztd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1205}' # _entry.id 3ZTD # _exptl.entry_id 3ZTD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 401.413 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'METHYL 4-[({(4R)-4-HYDROXY-1-[(3-METHYLISOXAZOL-5-YL)ACETYL]-L-PROLYL}AMINO)METHYL]BENZOATE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ZTD _cell.length_a 94.081 _cell.length_b 94.081 _cell.length_c 366.494 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZTD _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 PISA trimeric 3 author_and_software_defined_assembly 3 PISA trimeric 3 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,M,Q,R 1 1 D,E,F,N,S 2 1 G,H,I,O,T 3 1 J,K,L,P,U,V 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N # _chem_comp.formula 'C20 H23 N3 O6' _chem_comp.formula_weight 401.413 _chem_comp.id ZTD _chem_comp.mon_nstd_flag . _chem_comp.name 'METHYL 4-[({(4R)-4-HYDROXY-1-[(3-METHYLISOXAZOL-5-YL)ACETYL]-L-PROLYL}AMINO)METHYL]BENZOATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAW ZTD sing 376 n n CAW CAK ZTD sing 377 n y CAW NAQ ZTD doub 378 n y CAK CAZ ZTD doub 379 n y NAQ OAT ZTD sing 380 n y OAT CAZ ZTD sing 381 n y CAZ CAM ZTD sing 382 n n CAM CAU ZTD sing 383 n n CAU OAB ZTD doub 384 n n CAU N ZTD sing 385 n n N CD2 ZTD sing 386 n n N CA ZTD sing 387 n n CD2 CG ZTD sing 388 n n CG OD1 ZTD sing 389 n n CG CB ZTD sing 390 n n CB CA ZTD sing 391 n n CA C ZTD sing 392 n n C O ZTD doub 393 n n C NAR ZTD sing 394 n n NAR CAL ZTD sing 395 n n CAL CAX ZTD sing 396 n n CAX CAF ZTD doub 397 n y CAX CAE ZTD sing 398 n y CAF CAH ZTD sing 399 n y CAH CAY ZTD doub 400 n y CAE CAG ZTD doub 401 n y CAG CAY ZTD sing 402 n y CAY CBA ZTD sing 403 n n CBA OAS ZTD sing 404 n n CBA OAD ZTD doub 405 n n CAI OAS ZTD sing 406 n n CAA HAA1 ZTD sing 407 n n CAA HAA2 ZTD sing 408 n n CAA HAA3 ZTD sing 409 n n CAK HAK ZTD sing 410 n n CAM HAM1 ZTD sing 411 n n CAM HAM2 ZTD sing 412 n n CD2 HD21 ZTD sing 413 n n CD2 HD22 ZTD sing 414 n n CA HA ZTD sing 415 n n CG HG ZTD sing 416 n n OD1 HD1 ZTD sing 417 n n CB HB1C ZTD sing 418 n n CB HB2C ZTD sing 419 n n NAR HAR ZTD sing 420 n n CAL HAL1 ZTD sing 421 n n CAL HAL2 ZTD sing 422 n n CAF HAF ZTD sing 423 n n CAE HAE ZTD sing 424 n n CAH HAH ZTD sing 425 n n CAG HAG ZTD sing 426 n n CAI HAI1 ZTD sing 427 n n CAI HAI2 ZTD sing 428 n n CAI HAI3 ZTD sing 429 n n # _atom_sites.entry_id 3ZTD _atom_sites.fract_transf_matrix[1][1] 0.010629 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010629 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002729 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 ZTD C 1 1205 1205 ZTD ZTD . N 4 ZTD F 1 1205 1205 ZTD ZTD . O 4 ZTD I 1 1205 1205 ZTD ZTD . P 4 ZTD L 1 1205 1205 ZTD ZTD . Q 5 HOH A 1 2001 2001 HOH HOH . R 5 HOH C 1 2001 2001 HOH HOH . R 5 HOH C 2 2002 2002 HOH HOH . S 5 HOH F 1 2001 2001 HOH HOH . S 5 HOH F 2 2002 2002 HOH HOH . S 5 HOH F 3 2003 2003 HOH HOH . T 5 HOH I 1 2001 2001 HOH HOH . T 5 HOH I 2 2002 2002 HOH HOH . U 5 HOH J 1 2001 2001 HOH HOH . V 5 HOH L 1 2001 2001 HOH HOH . V 5 HOH L 2 2002 2002 HOH HOH . V 5 HOH L 3 2003 2003 HOH HOH . V 5 HOH L 4 2004 2004 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA ZTD . . . M 4 -56.756 10.635 5.482 1 46.86 ? CAA ZTD 1205 C 1 HETATM 2 C CAW ZTD . . . M 4 -56.372 11.695 4.441 1 45.01 ? CAW ZTD 1205 C 1 HETATM 3 C CAK ZTD . . . M 4 -55.11 11.972 4.089 1 44.33 ? CAK ZTD 1205 C 1 HETATM 4 N NAQ ZTD . . . M 4 -57.264 12.456 3.798 1 44.03 ? NAQ ZTD 1205 C 1 HETATM 5 O OAT ZTD . . . M 4 -56.507 13.252 2.982 1 43.41 ? OAT ZTD 1205 C 1 HETATM 6 C CAZ ZTD . . . M 4 -55.154 12.946 3.188 1 43.24 ? CAZ ZTD 1205 C 1 HETATM 7 C CAM ZTD . . . M 4 -53.974 13.639 2.424 1 39.07 ? CAM ZTD 1205 C 1 HETATM 8 C CAU ZTD . . . M 4 -54.12 13.27 0.896 1 38.68 ? CAU ZTD 1205 C 1 HETATM 9 O OAB ZTD . . . M 4 -53.975 12.093 0.589 1 38.76 ? OAB ZTD 1205 C 1 HETATM 10 N N ZTD . . . M 4 -54.45 14.108 -0.121 1 37.89 ? N ZTD 1205 C 1 HETATM 11 C CD2 ZTD . . . M 4 -54.87 15.503 0.014 1 37.67 ? CD2 ZTD 1205 C 1 HETATM 12 C CG ZTD . . . M 4 -55.826 15.699 -1.183 1 37 ? CG ZTD 1205 C 1 HETATM 13 O OD1 ZTD . . . M 4 -57.153 15.154 -0.935 1 31.13 ? OD1 ZTD 1205 C 1 HETATM 14 C CB ZTD . . . M 4 -55.098 14.92 -2.262 1 37.25 ? CB ZTD 1205 C 1 HETATM 15 C CA ZTD . . . M 4 -54.693 13.672 -1.506 1 38.23 ? CA ZTD 1205 C 1 HETATM 16 C C ZTD . . . M 4 -53.432 13.076 -2.073 1 39.58 ? C ZTD 1205 C 1 HETATM 17 O O ZTD . . . M 4 -52.356 13.6 -1.787 1 40.46 ? O ZTD 1205 C 1 HETATM 18 N NAR ZTD . . . M 4 -53.601 11.966 -2.82 1 40.05 ? NAR ZTD 1205 C 1 HETATM 19 C CAL ZTD . . . M 4 -52.489 11.166 -3.391 1 41.68 ? CAL ZTD 1205 C 1 HETATM 20 C CAX ZTD . . . M 4 -51.952 11.735 -4.699 1 45.21 ? CAX ZTD 1205 C 1 HETATM 21 C CAE ZTD . . . M 4 -52.77 12.508 -5.543 1 46.84 ? CAE ZTD 1205 C 1 HETATM 22 C CAG ZTD . . . M 4 -52.228 13.017 -6.738 1 46.41 ? CAG ZTD 1205 C 1 HETATM 23 C CAF ZTD . . . M 4 -50.617 11.485 -5.065 1 45.64 ? CAF ZTD 1205 C 1 HETATM 24 C CAH ZTD . . . M 4 -50.081 12 -6.256 1 44.28 ? CAH ZTD 1205 C 1 HETATM 25 C CAY ZTD . . . M 4 -50.895 12.757 -7.102 1 44.97 ? CAY ZTD 1205 C 1 HETATM 26 C CBA ZTD . . . M 4 -50.334 13.333 -8.41 1 45.29 ? CBA ZTD 1205 C 1 HETATM 27 C CAI ZTD . . . M 4 -48.64 12.777 -10.208 1 44.15 ? CAI ZTD 1205 C 1 HETATM 28 O OAD ZTD . . . M 4 -50.967 14.233 -8.978 1 44.24 ? OAD ZTD 1205 C 1 HETATM 29 O OAS ZTD . . . M 4 -49.073 12.908 -8.828 1 47.11 ? OAS ZTD 1205 C 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 29 #