data_3ZU1
#
_model_server_result.job_id            sE3EeZwAdzAolhCfUeiDaA 
_model_server_result.datetime_utc      '2024-11-24 09:45:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3zu1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1029}' 
#
_entry.id    3ZU1 
#
_exptl.entry_id    3ZU1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              110.111 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            RESORCINOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3ZU1 
_cell.length_a            79.06 
_cell.length_b            79.06 
_cell.length_c            41.02 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3ZU1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? 
disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 F ZN ZN . B ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc2 B NE2 HIS 10 B HIS 10 2_555 F ZN ZN . B ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc3 B NE2 HIS 10 B HIS 10 3_555 F ZN ZN . B ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc4 F ZN ZN . B ZN 1030 1_555 G CL CL . B CL 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc5 F ZN ZN . B ZN 1030 1_555 G CL CL . B CL 1031 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc6 F ZN ZN . B ZN 1030 1_555 G CL CL . B CL 1031 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
metalc ? metalc7 D NE2 HIS 10 D HIS 10 2_555 I ZN ZN . D ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
metalc ? metalc8 D NE2 HIS 10 D HIS 10 3_555 I ZN ZN . D ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc9 D NE2 HIS 10 D HIS 10 1_555 I ZN ZN . D ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
metalc ? metalc10 I ZN ZN . D ZN 1030 1_555 J CL CL . D CL 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc11 I ZN ZN . D ZN 1030 1_555 J CL CL . D CL 1031 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc12 I ZN ZN . D ZN 1030 1_555 J CL CL . D CL 1031 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C6 H6 O2' 
_chem_comp.formula_weight    110.111 
_chem_comp.id                RCO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              RESORCINOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1,3-BENZENEDIOL;1,3-DIHYDROXYBENZENE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 RCO doub 243 n y 
C1 C6 RCO sing 244 n y 
C1 O1 RCO sing 245 n n 
C2 C3 RCO sing 246 n y 
C2 H2 RCO sing 247 n n 
C3 C4 RCO doub 248 n y 
C3 O3 RCO sing 249 n n 
C4 C5 RCO sing 250 n y 
C4 H4 RCO sing 251 n n 
C5 C6 RCO doub 252 n y 
C5 H5 RCO sing 253 n n 
C6 H6 RCO sing 254 n n 
O1 H1 RCO sing 255 n n 
O3 H3 RCO sing 256 n n 
#
_atom_sites.entry_id                     3ZU1 
_atom_sites.fract_transf_matrix[1][1]    0.012649 
_atom_sites.fract_transf_matrix[1][2]    0.007303 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014605 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024378 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 RCO B 1 1029 1029 RCO RCO . 
F 4 ZN B 1 1030 1030 ZN ZN . 
G 5 CL B 1 1031 1031 CL CL . 
H 3 RCO D 1 1029 1029 RCO RCO . 
I 4 ZN D 1 1030 1030 ZN ZN . 
J 5 CL D 1 1031 1031 CL CL . 
K 6 HOH A 1 2001 2001 HOH HOH . 
K 6 HOH A 2 2002 2002 HOH HOH . 
K 6 HOH A 3 2003 2003 HOH HOH . 
K 6 HOH A 4 2004 2004 HOH HOH . 
K 6 HOH A 5 2005 2005 HOH HOH . 
K 6 HOH A 6 2006 2006 HOH HOH . 
K 6 HOH A 7 2007 2007 HOH HOH . 
K 6 HOH A 8 2008 2008 HOH HOH . 
K 6 HOH A 9 2009 2009 HOH HOH . 
K 6 HOH A 10 2010 2010 HOH HOH . 
K 6 HOH A 11 2011 2011 HOH HOH . 
K 6 HOH A 12 2012 2012 HOH HOH . 
K 6 HOH A 13 2013 2013 HOH HOH . 
K 6 HOH A 14 2014 2014 HOH HOH . 
K 6 HOH A 15 2015 2015 HOH HOH . 
K 6 HOH A 16 2016 2016 HOH HOH . 
K 6 HOH A 17 2017 2017 HOH HOH . 
K 6 HOH A 18 2018 2018 HOH HOH . 
K 6 HOH A 19 2019 2019 HOH HOH . 
L 6 HOH B 1 2001 2001 HOH HOH . 
L 6 HOH B 2 2002 2002 HOH HOH . 
L 6 HOH B 3 2003 2003 HOH HOH . 
L 6 HOH B 4 2004 2004 HOH HOH . 
L 6 HOH B 5 2005 2005 HOH HOH . 
L 6 HOH B 6 2006 2006 HOH HOH . 
L 6 HOH B 7 2007 2007 HOH HOH . 
L 6 HOH B 8 2008 2008 HOH HOH . 
L 6 HOH B 9 2009 2009 HOH HOH . 
L 6 HOH B 10 2010 2010 HOH HOH . 
L 6 HOH B 11 2011 2011 HOH HOH . 
L 6 HOH B 12 2012 2012 HOH HOH . 
L 6 HOH B 13 2013 2013 HOH HOH . 
L 6 HOH B 14 2014 2014 HOH HOH . 
L 6 HOH B 15 2015 2015 HOH HOH . 
L 6 HOH B 16 2016 2016 HOH HOH . 
L 6 HOH B 17 2017 2017 HOH HOH . 
L 6 HOH B 18 2018 2018 HOH HOH . 
L 6 HOH B 19 2019 2019 HOH HOH . 
L 6 HOH B 20 2020 2020 HOH HOH . 
L 6 HOH B 21 2021 2021 HOH HOH . 
M 6 HOH C 1 2001 2001 HOH HOH . 
M 6 HOH C 2 2002 2002 HOH HOH . 
M 6 HOH C 3 2003 2003 HOH HOH . 
M 6 HOH C 4 2004 2004 HOH HOH . 
M 6 HOH C 5 2005 2005 HOH HOH . 
M 6 HOH C 6 2006 2006 HOH HOH . 
M 6 HOH C 7 2007 2007 HOH HOH . 
M 6 HOH C 8 2008 2008 HOH HOH . 
M 6 HOH C 9 2009 2009 HOH HOH . 
M 6 HOH C 10 2010 2010 HOH HOH . 
M 6 HOH C 11 2011 2011 HOH HOH . 
M 6 HOH C 12 2012 2012 HOH HOH . 
M 6 HOH C 13 2013 2013 HOH HOH . 
M 6 HOH C 14 2014 2014 HOH HOH . 
M 6 HOH C 15 2015 2015 HOH HOH . 
M 6 HOH C 16 2016 2016 HOH HOH . 
M 6 HOH C 17 2017 2017 HOH HOH . 
M 6 HOH C 18 2018 2018 HOH HOH . 
M 6 HOH C 19 2019 2019 HOH HOH . 
M 6 HOH C 20 2020 2020 HOH HOH . 
M 6 HOH C 21 2021 2021 HOH HOH . 
M 6 HOH C 22 2022 2022 HOH HOH . 
M 6 HOH C 23 2023 2023 HOH HOH . 
N 6 HOH D 1 2001 2001 HOH HOH . 
N 6 HOH D 2 2002 2002 HOH HOH . 
N 6 HOH D 3 2003 2003 HOH HOH . 
N 6 HOH D 4 2004 2004 HOH HOH . 
N 6 HOH D 5 2005 2005 HOH HOH . 
N 6 HOH D 6 2006 2006 HOH HOH . 
N 6 HOH D 7 2007 2007 HOH HOH . 
N 6 HOH D 8 2008 2008 HOH HOH . 
N 6 HOH D 9 2009 2009 HOH HOH . 
N 6 HOH D 10 2010 2010 HOH HOH . 
N 6 HOH D 11 2011 2011 HOH HOH . 
N 6 HOH D 12 2012 2012 HOH HOH . 
N 6 HOH D 13 2013 2013 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 RCO . . . H 3 0.658 -10.264 7.435 1 25.92 ? C1 RCO 1029 D 1 
HETATM 2 C C2 RCO . . . H 3 0.71 -11.096 8.593 1 26.55 ? C2 RCO 1029 D 1 
HETATM 3 C C3 RCO . . . H 3 -0.03 -10.711 9.718 1 32.84 ? C3 RCO 1029 D 1 
HETATM 4 C C4 RCO . . . H 3 -0.81 -9.552 9.755 1 29.89 ? C4 RCO 1029 D 1 
HETATM 5 C C5 RCO . . . H 3 -0.888 -8.769 8.569 1 28.93 ? C5 RCO 1029 D 1 
HETATM 6 C C6 RCO . . . H 3 -0.149 -9.117 7.444 1 24.81 ? C6 RCO 1029 D 1 
HETATM 7 O O1 RCO . . . H 3 1.416 -10.674 6.371 1 26.69 ? O1 RCO 1029 D 1 
HETATM 8 O O3 RCO . . . H 3 -0.006 -11.493 10.876 1 28.81 ? O3 RCO 1029 D 1 
HETATM 9 H H2 RCO . . . H 3 1.328 -11.982 8.611 1 27.88 ? H2 RCO 1029 D 1 
HETATM 10 H H4 RCO . . . H 3 -1.401 -9.293 10.623 1 30.36 ? H4 RCO 1029 D 1 
HETATM 11 H H5 RCO . . . H 3 -1.486 -7.867 8.561 1 28.19 ? H5 RCO 1029 D 1 
HETATM 12 H H6 RCO . . . H 3 -0.191 -8.486 6.565 1 26.04 ? H6 RCO 1029 D 1 
HETATM 13 H H1 RCO . . . H 3 1.285 -10.071 5.628 1 26.46 ? H1 RCO 1029 D 1 
HETATM 14 H H3 RCO . . . H 3 0.495 -12.305 10.709 0 28.63 ? H3 RCO 1029 D 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           14 
#