data_3ZU1 # _model_server_result.job_id QkortauCYycCra7zvmys-g _model_server_result.datetime_utc '2024-11-24 09:46:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zu1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1030}' # _entry.id 3ZU1 # _exptl.entry_id 3ZU1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ZU1 _cell.length_a 79.06 _cell.length_b 79.06 _cell.length_c 41.02 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZU1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 F ZN ZN . B ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc2 B NE2 HIS 10 B HIS 10 2_555 F ZN ZN . B ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc3 B NE2 HIS 10 B HIS 10 3_555 F ZN ZN . B ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc4 F ZN ZN . B ZN 1030 1_555 G CL CL . B CL 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc5 F ZN ZN . B ZN 1030 1_555 G CL CL . B CL 1031 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc6 F ZN ZN . B ZN 1030 1_555 G CL CL . B CL 1031 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc7 D NE2 HIS 10 D HIS 10 2_555 I ZN ZN . D ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc8 D NE2 HIS 10 D HIS 10 3_555 I ZN ZN . D ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc9 D NE2 HIS 10 D HIS 10 1_555 I ZN ZN . D ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc10 I ZN ZN . D ZN 1030 1_555 J CL CL . D CL 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc11 I ZN ZN . D ZN 1030 1_555 J CL CL . D CL 1031 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc12 I ZN ZN . D ZN 1030 1_555 J CL CL . D CL 1031 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ZU1 _atom_sites.fract_transf_matrix[1][1] 0.012649 _atom_sites.fract_transf_matrix[1][2] 0.007303 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014605 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024378 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 RCO B 1 1029 1029 RCO RCO . F 4 ZN B 1 1030 1030 ZN ZN . G 5 CL B 1 1031 1031 CL CL . H 3 RCO D 1 1029 1029 RCO RCO . I 4 ZN D 1 1030 1030 ZN ZN . J 5 CL D 1 1031 1031 CL CL . K 6 HOH A 1 2001 2001 HOH HOH . K 6 HOH A 2 2002 2002 HOH HOH . K 6 HOH A 3 2003 2003 HOH HOH . K 6 HOH A 4 2004 2004 HOH HOH . K 6 HOH A 5 2005 2005 HOH HOH . K 6 HOH A 6 2006 2006 HOH HOH . K 6 HOH A 7 2007 2007 HOH HOH . K 6 HOH A 8 2008 2008 HOH HOH . K 6 HOH A 9 2009 2009 HOH HOH . K 6 HOH A 10 2010 2010 HOH HOH . K 6 HOH A 11 2011 2011 HOH HOH . K 6 HOH A 12 2012 2012 HOH HOH . K 6 HOH A 13 2013 2013 HOH HOH . K 6 HOH A 14 2014 2014 HOH HOH . K 6 HOH A 15 2015 2015 HOH HOH . K 6 HOH A 16 2016 2016 HOH HOH . K 6 HOH A 17 2017 2017 HOH HOH . K 6 HOH A 18 2018 2018 HOH HOH . K 6 HOH A 19 2019 2019 HOH HOH . L 6 HOH B 1 2001 2001 HOH HOH . L 6 HOH B 2 2002 2002 HOH HOH . L 6 HOH B 3 2003 2003 HOH HOH . L 6 HOH B 4 2004 2004 HOH HOH . L 6 HOH B 5 2005 2005 HOH HOH . L 6 HOH B 6 2006 2006 HOH HOH . L 6 HOH B 7 2007 2007 HOH HOH . L 6 HOH B 8 2008 2008 HOH HOH . L 6 HOH B 9 2009 2009 HOH HOH . L 6 HOH B 10 2010 2010 HOH HOH . L 6 HOH B 11 2011 2011 HOH HOH . L 6 HOH B 12 2012 2012 HOH HOH . L 6 HOH B 13 2013 2013 HOH HOH . L 6 HOH B 14 2014 2014 HOH HOH . L 6 HOH B 15 2015 2015 HOH HOH . L 6 HOH B 16 2016 2016 HOH HOH . L 6 HOH B 17 2017 2017 HOH HOH . L 6 HOH B 18 2018 2018 HOH HOH . L 6 HOH B 19 2019 2019 HOH HOH . L 6 HOH B 20 2020 2020 HOH HOH . L 6 HOH B 21 2021 2021 HOH HOH . M 6 HOH C 1 2001 2001 HOH HOH . M 6 HOH C 2 2002 2002 HOH HOH . M 6 HOH C 3 2003 2003 HOH HOH . M 6 HOH C 4 2004 2004 HOH HOH . M 6 HOH C 5 2005 2005 HOH HOH . M 6 HOH C 6 2006 2006 HOH HOH . M 6 HOH C 7 2007 2007 HOH HOH . M 6 HOH C 8 2008 2008 HOH HOH . M 6 HOH C 9 2009 2009 HOH HOH . M 6 HOH C 10 2010 2010 HOH HOH . M 6 HOH C 11 2011 2011 HOH HOH . M 6 HOH C 12 2012 2012 HOH HOH . M 6 HOH C 13 2013 2013 HOH HOH . M 6 HOH C 14 2014 2014 HOH HOH . M 6 HOH C 15 2015 2015 HOH HOH . M 6 HOH C 16 2016 2016 HOH HOH . M 6 HOH C 17 2017 2017 HOH HOH . M 6 HOH C 18 2018 2018 HOH HOH . M 6 HOH C 19 2019 2019 HOH HOH . M 6 HOH C 20 2020 2020 HOH HOH . M 6 HOH C 21 2021 2021 HOH HOH . M 6 HOH C 22 2022 2022 HOH HOH . M 6 HOH C 23 2023 2023 HOH HOH . N 6 HOH D 1 2001 2001 HOH HOH . N 6 HOH D 2 2002 2002 HOH HOH . N 6 HOH D 3 2003 2003 HOH HOH . N 6 HOH D 4 2004 2004 HOH HOH . N 6 HOH D 5 2005 2005 HOH HOH . N 6 HOH D 6 2006 2006 HOH HOH . N 6 HOH D 7 2007 2007 HOH HOH . N 6 HOH D 8 2008 2008 HOH HOH . N 6 HOH D 9 2009 2009 HOH HOH . N 6 HOH D 10 2010 2010 HOH HOH . N 6 HOH D 11 2011 2011 HOH HOH . N 6 HOH D 12 2012 2012 HOH HOH . N 6 HOH D 13 2013 2013 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x -0.029 _atom_site.Cartn_y -0.093 _atom_site.Cartn_z -8.067 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 24.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1030 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 374 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #