data_3ZUH
#
_model_server_result.job_id            jiMOTGvr6WhK9QY5vXWaLQ 
_model_server_result.datetime_utc      '2025-03-05 23:43:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3zuh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":1298}' 
#
_entry.id    3ZUH 
#
_exptl.entry_id    3ZUH 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              310.09 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            RIBULOSE-1,5-DIPHOSPHATE 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3ZUH 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3ZUH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 I N N 
? 2 K N N 
? 2 M N N 
? 2 O N N 
? 2 Q N N 
#
_chem_comp.formula           'C5 H12 O11 P2' 
_chem_comp.formula_weight    310.09 
_chem_comp.id                RUB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              RIBULOSE-1,5-DIPHOSPHATE 
_chem_comp.type              saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 RUB sing 306 n n 
C1 O1 RUB sing 307 n n 
C1 H11 RUB sing 308 n n 
C1 H12 RUB sing 309 n n 
C2 C3 RUB sing 310 n n 
C2 O2 RUB doub 311 n n 
C3 C4 RUB sing 312 n n 
C3 O3 RUB sing 313 n n 
C3 H3 RUB sing 314 n n 
C4 C5 RUB sing 315 n n 
C4 O4 RUB sing 316 n n 
C4 H4 RUB sing 317 n n 
C5 O5 RUB sing 318 n n 
C5 H51 RUB sing 319 n n 
C5 H52 RUB sing 320 n n 
O1 P1 RUB sing 321 n n 
O3 HO3 RUB sing 322 n n 
O4 HO4 RUB sing 323 n n 
O5 P2 RUB sing 324 n n 
P1 O1P RUB doub 325 n n 
P1 O2P RUB sing 326 n n 
P1 O3P RUB sing 327 n n 
P2 O4P RUB doub 328 n n 
P2 O5P RUB sing 329 n n 
P2 O6P RUB sing 330 n n 
O2P HOP2 RUB sing 331 n n 
O3P HOP3 RUB sing 332 n n 
O5P HOP5 RUB sing 333 n n 
O6P HOP6 RUB sing 334 n n 
#
_atom_sites.entry_id                     3ZUH 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 RUB A 1 1298 1298 RUB RUB . 
H 3 ADP A 1 1299 1299 ADP ADP . 
I 2 RUB B 1 1298 1298 RUB RUB . 
J 3 ADP B 1 1299 1299 ADP ADP . 
K 2 RUB C 1 1298 1298 RUB RUB . 
L 3 ADP C 1 1299 1299 ADP ADP . 
M 2 RUB D 1 1298 1298 RUB RUB . 
N 3 ADP D 1 1299 1299 ADP ADP . 
O 2 RUB E 1 1298 1298 RUB RUB . 
P 3 ADP E 1 1299 1299 ADP ADP . 
Q 2 RUB F 1 1298 1298 RUB RUB . 
R 3 ADP F 1 1299 1299 ADP ADP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 RUB . . . Q 2 175.414 201.938 193.731 1 20 ? C1 RUB 1298 F 1 
HETATM 2 C C2 RUB . . . Q 2 175.076 203.361 193.322 1 20 ? C2 RUB 1298 F 1 
HETATM 3 C C3 RUB . . . Q 2 173.878 203.625 192.466 1 20 ? C3 RUB 1298 F 1 
HETATM 4 C C4 RUB . . . Q 2 172.77 203.736 193.49 1 20 ? C4 RUB 1298 F 1 
HETATM 5 C C5 RUB . . . Q 2 171.388 203.486 192.91 1 20 ? C5 RUB 1298 F 1 
HETATM 6 O O1 RUB . . . Q 2 176.803 201.732 193.989 1 20 ? O1 RUB 1298 F 1 
HETATM 7 O O2 RUB . . . Q 2 175.71 204.319 193.734 1 20 ? O2 RUB 1298 F 1 
HETATM 8 O O3 RUB . . . Q 2 173.619 202.582 191.512 1 20 ? O3 RUB 1298 F 1 
HETATM 9 O O4 RUB . . . Q 2 172.884 205.028 194.095 1 20 ? O4 RUB 1298 F 1 
HETATM 10 O O5 RUB . . . Q 2 170.522 203.107 193.965 1 20 ? O5 RUB 1298 F 1 
HETATM 11 P P1 RUB . . . Q 2 177.241 200.252 194.357 1 20 ? P1 RUB 1298 F 1 
HETATM 12 P P2 RUB . . . Q 2 169.157 202.474 193.499 1 20 ? P2 RUB 1298 F 1 
HETATM 13 O O1P RUB . . . Q 2 177.625 199.658 193.035 1 20 ? O1P RUB 1298 F 1 
HETATM 14 O O2P RUB . . . Q 2 178.355 200.395 195.33 1 20 ? O2P RUB 1298 F 1 
HETATM 15 O O3P RUB . . . Q 2 175.965 199.737 194.924 1 20 ? O3P RUB 1298 F 1 
HETATM 16 O O4P RUB . . . Q 2 168.316 202.243 194.724 1 20 ? O4P RUB 1298 F 1 
HETATM 17 O O5P RUB . . . Q 2 169.68 201.271 192.78 1 20 ? O5P RUB 1298 F 1 
HETATM 18 O O6P RUB . . . Q 2 168.64 203.551 192.609 1 20 ? O6P RUB 1298 F 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           18 
#