data_3ZUM # _model_server_result.job_id 9HwA9lpvFI2xHVArMT_v6g _model_server_result.datetime_utc '2024-11-01 05:35:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zum # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":1304}' # _entry.id 3ZUM # _exptl.entry_id 3ZUM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ZUM _cell.length_a 139.461 _cell.length_b 139.461 _cell.length_c 185.014 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZUM _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 9 _struct_asym.id R _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B NE2 HIS 153 L HIS 153 1_555 M MG BCL . L BCL 1283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc2 B NE2 HIS 173 L HIS 173 1_555 L MG BCL . L BCL 1282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc3 B NE2 HIS 190 L HIS 190 1_555 R FE FE . M FE 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc4 B NE2 HIS 230 L HIS 230 1_555 R FE FE . M FE 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc5 C NE2 HIS 182 M HIS 182 1_555 P MG BCL . M BCL 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc6 C NE2 HIS 202 M HIS 202 1_555 Q MG BCL . M BCL 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc7 C NE2 HIS 219 M HIS 219 1_555 R FE FE . M FE 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc8 C OE2 GLU 234 M GLU 234 1_555 R FE FE . M FE 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc9 C OE1 GLU 234 M GLU 234 1_555 R FE FE . M FE 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc10 C NE2 HIS 266 M HIS 266 1_555 R FE FE . M FE 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ZUM _atom_sites.fract_transf_matrix[1][1] 0.00717 _atom_sites.fract_transf_matrix[1][2] 0.00414 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00828 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005405 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 PO4 H 1 1246 1246 PO4 PO4 . E 5 LDA L 1 701 701 LDA LDA . F 5 LDA L 1 702 702 LDA LDA . G 5 LDA L 1 703 703 LDA LDA . H 5 LDA L 1 704 704 LDA LDA . I 5 LDA L 1 705 705 LDA LDA . J 5 LDA L 1 706 706 LDA LDA . K 5 LDA L 1 707 707 LDA LDA . L 6 BCL L 1 1282 1282 BCL BCL . M 6 BCL L 1 1283 1283 BCL BCL . N 7 BPH L 1 1284 1284 BPH BPH . O 8 U10 L 1 1285 1285 U10 U10 . P 6 BCL M 1 1302 1302 BCL BCL . Q 6 BCL M 1 1303 1303 BCL BCL . R 9 FE M 1 1304 1304 FE FE . S 7 BPH M 1 1305 1305 BPH BPH . T 4 PO4 M 1 1306 1306 PO4 PO4 . U 10 SPN M 1 1307 1307 SPN SPN . V 8 U10 M 1 1308 1308 U10 U10 . W 11 HOH H 1 2001 2001 HOH HOH . W 11 HOH H 2 2002 2002 HOH HOH . W 11 HOH H 3 2003 2003 HOH HOH . W 11 HOH H 4 2004 2004 HOH HOH . W 11 HOH H 5 2005 2005 HOH HOH . W 11 HOH H 6 2006 2006 HOH HOH . W 11 HOH H 7 2007 2007 HOH HOH . W 11 HOH H 8 2008 2008 HOH HOH . W 11 HOH H 9 2009 2009 HOH HOH . W 11 HOH H 10 2010 2010 HOH HOH . W 11 HOH H 11 2011 2011 HOH HOH . W 11 HOH H 12 2012 2012 HOH HOH . W 11 HOH H 13 2013 2013 HOH HOH . W 11 HOH H 14 2014 2014 HOH HOH . W 11 HOH H 15 2015 2015 HOH HOH . W 11 HOH H 16 2016 2016 HOH HOH . W 11 HOH H 17 2017 2017 HOH HOH . W 11 HOH H 18 2018 2018 HOH HOH . W 11 HOH H 19 2019 2019 HOH HOH . W 11 HOH H 20 2020 2020 HOH HOH . W 11 HOH H 21 2021 2021 HOH HOH . W 11 HOH H 22 2022 2022 HOH HOH . W 11 HOH H 23 2023 2023 HOH HOH . W 11 HOH H 24 2024 2024 HOH HOH . W 11 HOH H 25 2025 2025 HOH HOH . W 11 HOH H 26 2026 2026 HOH HOH . W 11 HOH H 27 2027 2027 HOH HOH . W 11 HOH H 28 2028 2028 HOH HOH . W 11 HOH H 29 2029 2029 HOH HOH . W 11 HOH H 30 2030 2030 HOH HOH . W 11 HOH H 31 2031 2031 HOH HOH . W 11 HOH H 32 2032 2032 HOH HOH . W 11 HOH H 33 2033 2033 HOH HOH . W 11 HOH H 34 2034 2034 HOH HOH . W 11 HOH H 35 2035 2035 HOH HOH . W 11 HOH H 36 2036 2036 HOH HOH . W 11 HOH H 37 2037 2037 HOH HOH . W 11 HOH H 38 2038 2038 HOH HOH . W 11 HOH H 39 2039 2039 HOH HOH . W 11 HOH H 40 2040 2040 HOH HOH . W 11 HOH H 41 2041 2041 HOH HOH . W 11 HOH H 42 2042 2042 HOH HOH . W 11 HOH H 43 2043 2043 HOH HOH . W 11 HOH H 44 2044 2044 HOH HOH . W 11 HOH H 45 2045 2045 HOH HOH . W 11 HOH H 46 2046 2046 HOH HOH . W 11 HOH H 47 2047 2047 HOH HOH . W 11 HOH H 48 2048 2048 HOH HOH . W 11 HOH H 49 2049 2049 HOH HOH . W 11 HOH H 50 2050 2050 HOH HOH . W 11 HOH H 51 2051 2051 HOH HOH . W 11 HOH H 52 2052 2052 HOH HOH . W 11 HOH H 53 2053 2053 HOH HOH . W 11 HOH H 54 2054 2054 HOH HOH . W 11 HOH H 55 2055 2055 HOH HOH . W 11 HOH H 56 2056 2056 HOH HOH . W 11 HOH H 57 2057 2057 HOH HOH . W 11 HOH H 58 2058 2058 HOH HOH . W 11 HOH H 59 2059 2059 HOH HOH . W 11 HOH H 60 2060 2060 HOH HOH . W 11 HOH H 61 2061 2061 HOH HOH . W 11 HOH H 62 2062 2062 HOH HOH . W 11 HOH H 63 2063 2063 HOH HOH . W 11 HOH H 64 2064 2064 HOH HOH . W 11 HOH H 65 2065 2065 HOH HOH . W 11 HOH H 66 2066 2066 HOH HOH . W 11 HOH H 67 2067 2067 HOH HOH . W 11 HOH H 68 2068 2068 HOH HOH . W 11 HOH H 69 2069 2069 HOH HOH . W 11 HOH H 70 2070 2070 HOH HOH . W 11 HOH H 71 2071 2071 HOH HOH . W 11 HOH H 72 2072 2072 HOH HOH . W 11 HOH H 73 2073 2073 HOH HOH . W 11 HOH H 74 2074 2074 HOH HOH . W 11 HOH H 75 2075 2075 HOH HOH . W 11 HOH H 76 2076 2076 HOH HOH . W 11 HOH H 77 2077 2077 HOH HOH . W 11 HOH H 78 2078 2078 HOH HOH . W 11 HOH H 79 2079 2079 HOH HOH . W 11 HOH H 80 2080 2080 HOH HOH . W 11 HOH H 81 2081 2081 HOH HOH . W 11 HOH H 82 2082 2082 HOH HOH . W 11 HOH H 83 2083 2083 HOH HOH . W 11 HOH H 84 2084 2084 HOH HOH . W 11 HOH H 85 2085 2085 HOH HOH . W 11 HOH H 86 2086 2086 HOH HOH . W 11 HOH H 87 2087 2087 HOH HOH . W 11 HOH H 88 2088 2088 HOH HOH . W 11 HOH H 89 2089 2089 HOH HOH . W 11 HOH H 90 2090 2090 HOH HOH . W 11 HOH H 91 2091 2091 HOH HOH . W 11 HOH H 92 2092 2092 HOH HOH . W 11 HOH H 93 2093 2093 HOH HOH . W 11 HOH H 94 2094 2094 HOH HOH . W 11 HOH H 95 2095 2095 HOH HOH . W 11 HOH H 96 2096 2096 HOH HOH . W 11 HOH H 97 2097 2097 HOH HOH . W 11 HOH H 98 2098 2098 HOH HOH . W 11 HOH H 99 2099 2099 HOH HOH . W 11 HOH H 100 2100 2100 HOH HOH . W 11 HOH H 101 2101 2101 HOH HOH . W 11 HOH H 102 2102 2102 HOH HOH . W 11 HOH H 103 2103 2103 HOH HOH . W 11 HOH H 104 2104 2104 HOH HOH . W 11 HOH H 105 2105 2105 HOH HOH . W 11 HOH H 106 2106 2106 HOH HOH . W 11 HOH H 107 2107 2107 HOH HOH . W 11 HOH H 108 2108 2108 HOH HOH . W 11 HOH H 109 2109 2109 HOH HOH . X 11 HOH L 1 2001 2001 HOH HOH . X 11 HOH L 2 2002 2002 HOH HOH . X 11 HOH L 3 2003 2003 HOH HOH . X 11 HOH L 4 2004 2004 HOH HOH . X 11 HOH L 5 2005 2005 HOH HOH . X 11 HOH L 6 2006 2006 HOH HOH . X 11 HOH L 7 2007 2007 HOH HOH . X 11 HOH L 8 2008 2008 HOH HOH . X 11 HOH L 9 2009 2009 HOH HOH . X 11 HOH L 10 2010 2010 HOH HOH . X 11 HOH L 11 2011 2011 HOH HOH . X 11 HOH L 12 2012 2012 HOH HOH . X 11 HOH L 13 2013 2013 HOH HOH . X 11 HOH L 14 2014 2014 HOH HOH . X 11 HOH L 15 2015 2015 HOH HOH . X 11 HOH L 16 2016 2016 HOH HOH . X 11 HOH L 17 2017 2017 HOH HOH . X 11 HOH L 18 2018 2018 HOH HOH . X 11 HOH L 19 2019 2019 HOH HOH . X 11 HOH L 20 2020 2020 HOH HOH . X 11 HOH L 21 2021 2021 HOH HOH . X 11 HOH L 22 2022 2022 HOH HOH . X 11 HOH L 23 2023 2023 HOH HOH . X 11 HOH L 24 2024 2024 HOH HOH . X 11 HOH L 25 2025 2025 HOH HOH . X 11 HOH L 26 2026 2026 HOH HOH . X 11 HOH L 27 2027 2027 HOH HOH . X 11 HOH L 28 2028 2028 HOH HOH . X 11 HOH L 29 2029 2029 HOH HOH . X 11 HOH L 30 2030 2030 HOH HOH . X 11 HOH L 31 2031 2031 HOH HOH . X 11 HOH L 32 2032 2032 HOH HOH . X 11 HOH L 33 2033 2033 HOH HOH . X 11 HOH L 34 2034 2034 HOH HOH . X 11 HOH L 35 2035 2035 HOH HOH . X 11 HOH L 36 2036 2036 HOH HOH . X 11 HOH L 37 2037 2037 HOH HOH . X 11 HOH L 38 2038 2038 HOH HOH . X 11 HOH L 39 2039 2039 HOH HOH . X 11 HOH L 40 2040 2040 HOH HOH . X 11 HOH L 41 2041 2041 HOH HOH . X 11 HOH L 42 2042 2042 HOH HOH . X 11 HOH L 43 2043 2043 HOH HOH . X 11 HOH L 44 2044 2044 HOH HOH . X 11 HOH L 45 2045 2045 HOH HOH . X 11 HOH L 46 2046 2046 HOH HOH . X 11 HOH L 47 2047 2047 HOH HOH . X 11 HOH L 48 2048 2048 HOH HOH . X 11 HOH L 49 2049 2049 HOH HOH . Y 11 HOH M 1 2001 2001 HOH HOH . Y 11 HOH M 2 2002 2002 HOH HOH . Y 11 HOH M 3 2003 2003 HOH HOH . Y 11 HOH M 4 2004 2004 HOH HOH . Y 11 HOH M 5 2005 2005 HOH HOH . Y 11 HOH M 6 2006 2006 HOH HOH . Y 11 HOH M 7 2007 2007 HOH HOH . Y 11 HOH M 8 2008 2008 HOH HOH . Y 11 HOH M 9 2009 2009 HOH HOH . Y 11 HOH M 10 2010 2010 HOH HOH . Y 11 HOH M 11 2011 2011 HOH HOH . Y 11 HOH M 12 2012 2012 HOH HOH . Y 11 HOH M 13 2013 2013 HOH HOH . Y 11 HOH M 14 2014 2014 HOH HOH . Y 11 HOH M 15 2015 2015 HOH HOH . Y 11 HOH M 16 2016 2016 HOH HOH . Y 11 HOH M 17 2017 2017 HOH HOH . Y 11 HOH M 18 2018 2018 HOH HOH . Y 11 HOH M 19 2019 2019 HOH HOH . Y 11 HOH M 20 2020 2020 HOH HOH . Y 11 HOH M 21 2021 2021 HOH HOH . Y 11 HOH M 22 2022 2022 HOH HOH . Y 11 HOH M 23 2023 2023 HOH HOH . Y 11 HOH M 24 2024 2024 HOH HOH . Y 11 HOH M 25 2025 2025 HOH HOH . Y 11 HOH M 26 2026 2026 HOH HOH . Y 11 HOH M 27 2027 2027 HOH HOH . Y 11 HOH M 28 2028 2028 HOH HOH . Y 11 HOH M 29 2029 2029 HOH HOH . Y 11 HOH M 30 2030 2030 HOH HOH . Y 11 HOH M 31 2031 2031 HOH HOH . Y 11 HOH M 32 2032 2032 HOH HOH . Y 11 HOH M 33 2033 2033 HOH HOH . Y 11 HOH M 34 2034 2034 HOH HOH . Y 11 HOH M 35 2035 2035 HOH HOH . Y 11 HOH M 36 2036 2036 HOH HOH . Y 11 HOH M 37 2037 2037 HOH HOH . Y 11 HOH M 38 2038 2038 HOH HOH . Y 11 HOH M 39 2039 2039 HOH HOH . Y 11 HOH M 40 2040 2040 HOH HOH . Y 11 HOH M 41 2041 2041 HOH HOH . Y 11 HOH M 42 2042 2042 HOH HOH . Y 11 HOH M 43 2043 2043 HOH HOH . Y 11 HOH M 44 2044 2044 HOH HOH . Y 11 HOH M 45 2045 2045 HOH HOH . Y 11 HOH M 46 2046 2046 HOH HOH . Y 11 HOH M 47 2047 2047 HOH HOH . Y 11 HOH M 48 2048 2048 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id R _atom_site.label_entity_id 9 _atom_site.Cartn_x 49.828 _atom_site.Cartn_y 61.292 _atom_site.Cartn_z 71.237 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.98 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 1304 _atom_site.auth_asym_id M _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #