data_3ZUX # _model_server_result.job_id si5vFdQpgSnMOAarKvsS-g _model_server_result.datetime_utc '2024-11-22 06:51:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zux # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1319}' # _entry.id 3ZUX # _exptl.entry_id 3ZUX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 734.039 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHATIDYLETHANOLAMINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ZUX _cell.length_a 73.33 _cell.length_b 73.33 _cell.length_c 163.52 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZUX _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 J N N ? 6 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 82 A GLN 77 1_555 C NA NA . A NA 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc2 A SG CYS 92 A CYS 87 1_555 D HG HG . A HG 1312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? metalc ? metalc3 A OG SER 119 A SER 114 1_555 B NA NA . A NA 1310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc4 A OD1 ASN 120 A ASN 115 1_555 B NA NA . A NA 1310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc5 A O SER 133 A SER 128 1_555 B NA NA . A NA 1310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc6 A OG SER 133 A SER 128 1_555 B NA NA . A NA 1310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc7 A OG1 THR 137 A THR 132 1_555 B NA NA . A NA 1310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc8 A OE1 GLU 265 A GLU 260 1_555 B NA NA . A NA 1310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc9 A O GLU 265 A GLU 260 1_555 C NA NA . A NA 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc10 A O VAL 266 A VAL 261 1_555 C NA NA . A NA 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc11 A O MET 268 A MET 263 1_555 C NA NA . A NA 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc12 A OE1 GLN 269 A GLN 264 1_555 C NA NA . A NA 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? # _chem_comp.formula 'C40 H80 N O8 P' _chem_comp.formula_weight 734.039 _chem_comp.id PTY _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHATIDYLETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O4 PTY sing 323 n n C1 C6 PTY sing 324 n n C1 HC11 PTY sing 325 n n C1 HC12 PTY sing 326 n n C2 C3 PTY sing 327 n n C2 N1 PTY sing 328 n n C2 HC21 PTY sing 329 n n C2 HC22 PTY sing 330 n n C3 O11 PTY sing 331 n n C3 HC31 PTY sing 332 n n C3 HC32 PTY sing 333 n n O4 C30 PTY sing 334 n n C5 C6 PTY sing 335 n n C5 O14 PTY sing 336 n n C5 HC51 PTY sing 337 n n C5 HC52 PTY sing 338 n n C6 O7 PTY sing 339 n n C6 HC6 PTY sing 340 n n O7 C8 PTY sing 341 n n C8 O10 PTY doub 342 n n C8 C11 PTY sing 343 n n C11 C12 PTY sing 344 n n C11 H111 PTY sing 345 n n C11 H112 PTY sing 346 n n C12 C13 PTY sing 347 n n C12 H121 PTY sing 348 n n C12 H122 PTY sing 349 n n C13 C14 PTY sing 350 n n C13 H131 PTY sing 351 n n C13 H132 PTY sing 352 n n C14 C15 PTY sing 353 n n C14 H141 PTY sing 354 n n C14 H142 PTY sing 355 n n C15 C16 PTY sing 356 n n C15 H151 PTY sing 357 n n C15 H152 PTY sing 358 n n C16 C17 PTY sing 359 n n C16 H161 PTY sing 360 n n C16 H162 PTY sing 361 n n C17 C18 PTY sing 362 n n C17 H171 PTY sing 363 n n C17 H172 PTY sing 364 n n C18 C19 PTY sing 365 n n C18 H181 PTY sing 366 n n C18 H182 PTY sing 367 n n C19 C20 PTY sing 368 n n C19 H191 PTY sing 369 n n C19 H192 PTY sing 370 n n C20 C21 PTY sing 371 n n C20 H201 PTY sing 372 n n C20 H202 PTY sing 373 n n C21 C22 PTY sing 374 n n C21 H211 PTY sing 375 n n C21 H212 PTY sing 376 n n C22 C23 PTY sing 377 n n C22 H221 PTY sing 378 n n C22 H222 PTY sing 379 n n C23 C24 PTY sing 380 n n C23 H231 PTY sing 381 n n C23 H232 PTY sing 382 n n C24 C25 PTY sing 383 n n C24 H241 PTY sing 384 n n C24 H242 PTY sing 385 n n C25 C26 PTY sing 386 n n C25 H251 PTY sing 387 n n C25 H252 PTY sing 388 n n C26 C27 PTY sing 389 n n C26 H261 PTY sing 390 n n C26 H262 PTY sing 391 n n C27 C28 PTY sing 392 n n C27 H271 PTY sing 393 n n C27 H272 PTY sing 394 n n C28 C29 PTY sing 395 n n C28 H281 PTY sing 396 n n C28 H282 PTY sing 397 n n C29 H291 PTY sing 398 n n C29 H292 PTY sing 399 n n C29 H293 PTY sing 400 n n C30 C31 PTY sing 401 n n C30 O30 PTY doub 402 n n C31 C32 PTY sing 403 n n C31 H311 PTY sing 404 n n C31 H312 PTY sing 405 n n C32 C33 PTY sing 406 n n C32 H321 PTY sing 407 n n C32 H322 PTY sing 408 n n C33 C34 PTY sing 409 n n C33 H331 PTY sing 410 n n C33 H332 PTY sing 411 n n C34 C35 PTY sing 412 n n C34 H341 PTY sing 413 n n C34 H342 PTY sing 414 n n C35 C36 PTY sing 415 n n C35 H351 PTY sing 416 n n C35 H352 PTY sing 417 n n C36 C37 PTY sing 418 n n C36 H361 PTY sing 419 n n C36 H362 PTY sing 420 n n C37 C38 PTY sing 421 n n C37 H371 PTY sing 422 n n C37 H372 PTY sing 423 n n C38 C39 PTY sing 424 n n C38 H381 PTY sing 425 n n C38 H382 PTY sing 426 n n C39 C40 PTY sing 427 n n C39 H391 PTY sing 428 n n C39 H392 PTY sing 429 n n C40 C41 PTY sing 430 n n C40 H401 PTY sing 431 n n C40 H402 PTY sing 432 n n C41 C42 PTY sing 433 n n C41 H411 PTY sing 434 n n C41 H412 PTY sing 435 n n C42 C43 PTY sing 436 n n C42 H421 PTY sing 437 n n C42 H422 PTY sing 438 n n C43 C44 PTY sing 439 n n C43 H431 PTY sing 440 n n C43 H432 PTY sing 441 n n C44 H441 PTY sing 442 n n C44 H442 PTY sing 443 n n C44 H443 PTY sing 444 n n P1 O11 PTY sing 445 n n P1 O12 PTY sing 446 n n P1 O13 PTY doub 447 n n P1 O14 PTY sing 448 n n O12 H12O PTY sing 449 n n N1 HN11 PTY sing 450 n n N1 HN12 PTY sing 451 n n # _atom_sites.entry_id 3ZUX _atom_sites.fract_transf_matrix[1][1] 0.013637 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013637 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006115 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 1310 1310 NA NA . C 2 NA A 1 1311 1311 NA NA . D 3 HG A 1 1312 1312 HG HG . E 4 TCH A 1 1313 1313 TCH TCH . F 4 TCH A 1 1314 1314 TCH TCH . G 5 LDA A 1 1315 1315 LDA LDA . H 5 LDA A 1 1316 1316 LDA LDA . I 5 LDA A 1 1317 1317 LDA LDA . J 6 PTY A 1 1318 1318 PTY PTY . K 6 PTY A 1 1319 1319 PTY PTY . L 5 LDA A 1 1320 1320 LDA LDA . M 5 LDA A 1 1321 1321 LDA LDA . N 7 HOH A 1 2001 2001 HOH HOH . N 7 HOH A 2 2002 2002 HOH HOH . N 7 HOH A 3 2003 2003 HOH HOH . N 7 HOH A 4 2004 2004 HOH HOH . N 7 HOH A 5 2005 2005 HOH HOH . N 7 HOH A 6 2006 2006 HOH HOH . N 7 HOH A 7 2007 2007 HOH HOH . N 7 HOH A 8 2008 2008 HOH HOH . N 7 HOH A 9 2009 2009 HOH HOH . N 7 HOH A 10 2010 2010 HOH HOH . N 7 HOH A 11 2011 2011 HOH HOH . N 7 HOH A 12 2012 2012 HOH HOH . N 7 HOH A 13 2013 2013 HOH HOH . N 7 HOH A 14 2014 2014 HOH HOH . N 7 HOH A 15 2015 2015 HOH HOH . N 7 HOH A 16 2016 2016 HOH HOH . N 7 HOH A 17 2017 2017 HOH HOH . N 7 HOH A 18 2018 2018 HOH HOH . N 7 HOH A 19 2019 2019 HOH HOH . N 7 HOH A 20 2020 2020 HOH HOH . N 7 HOH A 21 2021 2021 HOH HOH . N 7 HOH A 22 2022 2022 HOH HOH . N 7 HOH A 23 2023 2023 HOH HOH . N 7 HOH A 24 2024 2024 HOH HOH . N 7 HOH A 25 2025 2025 HOH HOH . N 7 HOH A 26 2026 2026 HOH HOH . N 7 HOH A 27 2027 2027 HOH HOH . N 7 HOH A 28 2028 2028 HOH HOH . N 7 HOH A 29 2029 2029 HOH HOH . N 7 HOH A 30 2030 2030 HOH HOH . N 7 HOH A 31 2031 2031 HOH HOH . N 7 HOH A 32 2032 2032 HOH HOH . N 7 HOH A 33 2033 2033 HOH HOH . N 7 HOH A 34 2034 2034 HOH HOH . N 7 HOH A 35 2035 2035 HOH HOH . N 7 HOH A 36 2036 2036 HOH HOH . N 7 HOH A 37 2037 2037 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PTY . . . K 6 28.438 54.524 71.081 1 94.66 ? C1 PTY 1319 A 1 HETATM 2 C C2 PTY . . . K 6 27.44 51.525 65.312 1 105.33 ? C2 PTY 1319 A 1 HETATM 3 C C3 PTY . . . K 6 28.668 52.382 65.006 1 105.36 ? C3 PTY 1319 A 1 HETATM 4 O O4 PTY . . . K 6 27.674 55.59 71.592 1 92.68 ? O4 PTY 1319 A 1 HETATM 5 C C5 PTY . . . K 6 29.743 54.218 68.954 1 99.25 ? C5 PTY 1319 A 1 HETATM 6 C C6 PTY . . . K 6 29.593 55.046 70.204 1 96.71 ? C6 PTY 1319 A 1 HETATM 7 O O7 PTY . . . K 6 30.722 55.287 71.029 1 96.89 ? O7 PTY 1319 A 1 HETATM 8 C C8 PTY . . . K 6 31.8 56.184 70.978 1 95.74 ? C8 PTY 1319 A 1 HETATM 9 O O10 PTY . . . K 6 32.469 56.091 70.022 1 96.73 ? O10 PTY 1319 A 1 HETATM 10 C C11 PTY . . . K 6 32.08 57.153 72.113 1 93.77 ? C11 PTY 1319 A 1 HETATM 11 C C12 PTY . . . K 6 32.782 58.452 71.752 1 92.32 ? C12 PTY 1319 A 1 HETATM 12 C C13 PTY . . . K 6 33.39 59.096 72.986 1 91.18 ? C13 PTY 1319 A 1 HETATM 13 C C14 PTY . . . K 6 32.37 59.895 73.741 1 89.12 ? C14 PTY 1319 A 1 HETATM 14 C C15 PTY . . . K 6 32.825 60.367 75.111 1 87.93 ? C15 PTY 1319 A 1 HETATM 15 C C16 PTY . . . K 6 31.627 60.543 76.05 1 85.8 ? C16 PTY 1319 A 1 HETATM 16 C C17 PTY . . . K 6 31.728 61.26 77.401 1 84.99 ? C17 PTY 1319 A 1 HETATM 17 C C18 PTY . . . K 6 32.237 60.273 78.504 1 85.05 ? C18 PTY 1319 A 1 HETATM 18 C C19 PTY . . . K 6 33.39 60.797 79.409 1 84.74 ? C19 PTY 1319 A 1 HETATM 19 C C30 PTY . . . K 6 27.805 56.13 72.89 1 91.52 ? C30 PTY 1319 A 1 HETATM 20 C C31 PTY . . . K 6 28.498 55.464 74.066 1 91 ? C31 PTY 1319 A 1 HETATM 21 O O30 PTY . . . K 6 27.303 57.174 72.964 1 91.08 ? O30 PTY 1319 A 1 HETATM 22 C C32 PTY . . . K 6 29.458 56.402 74.74 1 90.39 ? C32 PTY 1319 A 1 HETATM 23 C C33 PTY . . . K 6 28.864 56.845 76.033 1 90.23 ? C33 PTY 1319 A 1 HETATM 24 C C34 PTY . . . K 6 29.969 57.111 77.115 1 91.04 ? C34 PTY 1319 A 1 HETATM 25 C C35 PTY . . . K 6 29.886 56.105 78.284 1 92.39 ? C35 PTY 1319 A 1 HETATM 26 C C36 PTY . . . K 6 30.754 56.648 79.386 1 93.03 ? C36 PTY 1319 A 1 HETATM 27 C C37 PTY . . . K 6 30.481 55.823 80.642 1 93.12 ? C37 PTY 1319 A 1 HETATM 28 C C38 PTY . . . K 6 30.837 56.498 81.905 1 91.53 ? C38 PTY 1319 A 1 HETATM 29 P P1 PTY . . . K 6 29.718 54.573 66.235 1 102.11 ? P1 PTY 1319 A 1 HETATM 30 O O11 PTY . . . K 6 28.748 53.243 66.151 1 103.78 ? O11 PTY 1319 A 1 HETATM 31 O O12 PTY . . . K 6 31.169 54.374 65.793 1 103.77 ? O12 PTY 1319 A 1 HETATM 32 O O13 PTY . . . K 6 29.182 55.671 65.181 1 99.83 ? O13 PTY 1319 A 1 HETATM 33 O O14 PTY . . . K 6 29.364 54.999 67.798 1 100.36 ? O14 PTY 1319 A 1 HETATM 34 N N1 PTY . . . K 6 27.957 50.179 65.56 1 106.05 ? N1 PTY 1319 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 34 #