data_3ZVY
#
_model_server_result.job_id            q508-xGfzfU74grIz0Dx9A 
_model_server_result.datetime_utc      '2025-07-04 08:33:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3zvy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":1370}' 
#
_entry.id    3ZVY 
#
_exptl.entry_id    3ZVY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              35.453 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHLORIDE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3ZVY 
_cell.length_a            42.3 
_cell.length_b            42.3 
_cell.length_c            182.7 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3ZVY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
B,D,J,K,L,M,N,O,P,R 1 1 
A,C,E,F,G,H,I,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 N N N 
? 5 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 7 A CYS 302 1_555 E ZN ZN . A ZN 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc2 A SG CYS 10 A CYS 305 1_555 E ZN ZN . A ZN 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? 
metalc ? metalc3 A SG CYS 18 A CYS 313 1_555 E ZN ZN . A ZN 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? 
metalc ? metalc4 A SG CYS 21 A CYS 316 1_555 E ZN ZN . A ZN 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc5 A SG CYS 23 A CYS 318 1_555 F ZN ZN . A ZN 1366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc6 A NE2 HIS 24 A HIS 319 1_555 H ZN ZN . A ZN 1368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc7 A SG CYS 26 A CYS 321 1_555 F ZN ZN . A ZN 1366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc8 A SG CYS 38 A CYS 333 1_555 G ZN ZN . A ZN 1367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? 
metalc ? metalc9 A SG CYS 41 A CYS 336 1_555 G ZN ZN . A ZN 1367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
metalc ? metalc10 A ND1 HIS 46 A HIS 341 1_555 F ZN ZN . A ZN 1366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
metalc ? metalc11 A SG CYS 49 A CYS 344 1_555 F ZN ZN . A ZN 1366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc12 A SG CYS 65 A CYS 360 1_555 G ZN ZN . A ZN 1367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc13 A OE2 GLU 67 A GLU 362 1_555 H ZN ZN . A ZN 1368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc14 A OE1 GLU 67 A GLU 362 1_555 H ZN ZN . A ZN 1368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? 
metalc ? metalc15 A SG CYS 68 A CYS 363 1_555 G ZN ZN . A ZN 1367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc16 H ZN ZN . A ZN 1368 1_555 B ND1 HIS 9 B HIS 304 5_656 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? 
metalc ? metalc17 B SG CYS 7 B CYS 302 1_555 J ZN ZN . B ZN 1366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? 
metalc ? metalc18 B SG CYS 10 B CYS 305 1_555 J ZN ZN . B ZN 1366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc19 B SG CYS 18 B CYS 313 1_555 J ZN ZN . B ZN 1366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? 
metalc ? metalc20 B SG CYS 21 B CYS 316 1_555 J ZN ZN . B ZN 1366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc21 B SG CYS 23 B CYS 318 1_555 K ZN ZN . B ZN 1367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc22 B NE2 HIS 24 B HIS 319 1_555 M ZN ZN . B ZN 1369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? 
metalc ? metalc23 B SG CYS 26 B CYS 321 1_555 K ZN ZN . B ZN 1367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? 
metalc ? metalc24 B SG CYS 38 B CYS 333 1_555 L ZN ZN . B ZN 1368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc25 B SG CYS 41 B CYS 336 1_555 L ZN ZN . B ZN 1368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc26 B ND1 HIS 46 B HIS 341 1_555 K ZN ZN . B ZN 1367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
metalc ? metalc27 B SG CYS 49 B CYS 344 1_555 K ZN ZN . B ZN 1367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc28 B SG CYS 65 B CYS 360 1_555 L ZN ZN . B ZN 1368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc29 B OE2 GLU 67 B GLU 362 1_555 M ZN ZN . B ZN 1369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc30 B OE1 GLU 67 B GLU 362 1_555 M ZN ZN . B ZN 1369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? 
metalc ? metalc31 B SG CYS 68 B CYS 363 1_555 L ZN ZN . B ZN 1368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
#
_chem_comp.formula           'Cl -1' 
_chem_comp.formula_weight    35.453 
_chem_comp.id                CL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHLORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3ZVY 
_atom_sites.fract_transf_matrix[1][1]    0.023641 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023641 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005473 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 ZN A 1 1365 1365 ZN ZN . 
F 3 ZN A 1 1366 1366 ZN ZN . 
G 3 ZN A 1 1367 1367 ZN ZN . 
H 3 ZN A 1 1368 1368 ZN ZN . 
I 4 TRS A 1 1369 1369 TRS TRS . 
J 3 ZN B 1 1366 1366 ZN ZN . 
K 3 ZN B 1 1367 1367 ZN ZN . 
L 3 ZN B 1 1368 1368 ZN ZN . 
M 3 ZN B 1 1369 1369 ZN ZN . 
N 5 CL B 1 1370 1370 CL CL . 
O 5 CL B 1 1371 1371 CL CL . 
P 4 TRS B 1 1372 1372 TRS TRS . 
Q 6 HOH A 1 2001 2001 HOH HOH . 
Q 6 HOH A 2 2002 2002 HOH HOH . 
Q 6 HOH A 3 2003 2003 HOH HOH . 
Q 6 HOH A 4 2004 2004 HOH HOH . 
Q 6 HOH A 5 2005 2005 HOH HOH . 
Q 6 HOH A 6 2006 2006 HOH HOH . 
Q 6 HOH A 7 2007 2007 HOH HOH . 
Q 6 HOH A 8 2008 2008 HOH HOH . 
Q 6 HOH A 9 2009 2009 HOH HOH . 
Q 6 HOH A 10 2010 2010 HOH HOH . 
Q 6 HOH A 11 2011 2011 HOH HOH . 
Q 6 HOH A 12 2012 2012 HOH HOH . 
Q 6 HOH A 13 2013 2013 HOH HOH . 
Q 6 HOH A 14 2014 2014 HOH HOH . 
Q 6 HOH A 15 2015 2015 HOH HOH . 
Q 6 HOH A 16 2016 2016 HOH HOH . 
Q 6 HOH A 17 2017 2017 HOH HOH . 
Q 6 HOH A 18 2018 2018 HOH HOH . 
Q 6 HOH A 19 2019 2019 HOH HOH . 
Q 6 HOH A 20 2020 2020 HOH HOH . 
Q 6 HOH A 21 2021 2021 HOH HOH . 
Q 6 HOH A 22 2022 2022 HOH HOH . 
Q 6 HOH A 23 2023 2023 HOH HOH . 
Q 6 HOH A 24 2024 2024 HOH HOH . 
Q 6 HOH A 25 2025 2025 HOH HOH . 
Q 6 HOH A 26 2026 2026 HOH HOH . 
Q 6 HOH A 27 2027 2027 HOH HOH . 
Q 6 HOH A 28 2028 2028 HOH HOH . 
Q 6 HOH A 29 2029 2029 HOH HOH . 
Q 6 HOH A 30 2030 2030 HOH HOH . 
Q 6 HOH A 31 2031 2031 HOH HOH . 
Q 6 HOH A 32 2032 2032 HOH HOH . 
Q 6 HOH A 33 2033 2033 HOH HOH . 
Q 6 HOH A 34 2034 2034 HOH HOH . 
Q 6 HOH A 35 2035 2035 HOH HOH . 
Q 6 HOH A 36 2036 2036 HOH HOH . 
Q 6 HOH A 37 2037 2037 HOH HOH . 
Q 6 HOH A 38 2038 2038 HOH HOH . 
Q 6 HOH A 39 2039 2039 HOH HOH . 
Q 6 HOH A 40 2040 2040 HOH HOH . 
Q 6 HOH A 41 2041 2041 HOH HOH . 
Q 6 HOH A 42 2042 2042 HOH HOH . 
Q 6 HOH A 43 2043 2043 HOH HOH . 
Q 6 HOH A 44 2044 2044 HOH HOH . 
R 6 HOH B 1 2001 2001 HOH HOH . 
R 6 HOH B 2 2002 2002 HOH HOH . 
R 6 HOH B 3 2003 2003 HOH HOH . 
R 6 HOH B 4 2004 2004 HOH HOH . 
R 6 HOH B 5 2005 2005 HOH HOH . 
R 6 HOH B 6 2006 2006 HOH HOH . 
R 6 HOH B 7 2007 2007 HOH HOH . 
R 6 HOH B 8 2008 2008 HOH HOH . 
R 6 HOH B 9 2009 2009 HOH HOH . 
R 6 HOH B 10 2010 2010 HOH HOH . 
R 6 HOH B 11 2011 2011 HOH HOH . 
R 6 HOH B 12 2012 2012 HOH HOH . 
R 6 HOH B 13 2013 2013 HOH HOH . 
R 6 HOH B 14 2014 2014 HOH HOH . 
R 6 HOH B 15 2015 2015 HOH HOH . 
R 6 HOH B 16 2016 2016 HOH HOH . 
R 6 HOH B 17 2017 2017 HOH HOH . 
R 6 HOH B 18 2018 2018 HOH HOH . 
R 6 HOH B 19 2019 2019 HOH HOH . 
R 6 HOH B 20 2020 2020 HOH HOH . 
R 6 HOH B 21 2021 2021 HOH HOH . 
R 6 HOH B 22 2022 2022 HOH HOH . 
R 6 HOH B 23 2023 2023 HOH HOH . 
R 6 HOH B 24 2024 2024 HOH HOH . 
R 6 HOH B 25 2025 2025 HOH HOH . 
R 6 HOH B 26 2026 2026 HOH HOH . 
R 6 HOH B 27 2027 2027 HOH HOH . 
R 6 HOH B 28 2028 2028 HOH HOH . 
R 6 HOH B 29 2029 2029 HOH HOH . 
R 6 HOH B 30 2030 2030 HOH HOH . 
R 6 HOH B 31 2031 2031 HOH HOH . 
R 6 HOH B 32 2032 2032 HOH HOH . 
R 6 HOH B 33 2033 2033 HOH HOH . 
R 6 HOH B 34 2034 2034 HOH HOH . 
R 6 HOH B 35 2035 2035 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 CL CL CL . A . N 5 18.622 0.814 157.083 0.55 41.85 ? CL CL 1370 B 1 
HETATM 2 CL CL CL . B . N 5 23.185 0.427 155.489 0.45 48.38 ? CL CL 1370 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           2 
#