data_3ZZ5 # _model_server_result.job_id 1TZlR7osuGmp0-DY8aq0iA _model_server_result.datetime_utc '2025-06-30 17:56:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zz5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1181}' # _entry.id 3ZZ5 # _exptl.entry_id 3ZZ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.404 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ETHYL (4R)-4-[(TERT-BUTOXYCARBONYL)AMINO]-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.95 _cell.angle_gamma 90 _cell.entry_id 3ZZ5 _cell.length_a 76.88 _cell.length_b 63.96 _cell.length_c 39.55 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZZ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_454 -x-1,y,-z-1 -1 0 0 0 1 0 0 0 -1 -59.573449 0 -35.562421 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 148 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 147 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C63 _struct_conn.ptnr2_label_comp_id G74 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id G74 _struct_conn.ptnr2_auth_seq_id 1181 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.823 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H28 N2 O5' _chem_comp.formula_weight 328.404 _chem_comp.id G74 _chem_comp.mon_nstd_flag . _chem_comp.name 'ETHYL (4R)-4-[(TERT-BUTOXYCARBONYL)AMINO]-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O88 C84 G74 doub 83 n n C84 O86 G74 sing 84 n n C84 C82 G74 sing 85 n n O86 C3 G74 sing 86 n n C3 C5 G74 sing 87 n n C82 C63 G74 sing 88 n n C63 C57 G74 sing 89 n n C57 C59 G74 sing 90 n n C57 N49 G74 sing 91 n n C59 C61 G74 sing 92 n n C61 C73 G74 sing 93 n n C61 C65 G74 sing 94 n n C73 C71 G74 sing 95 n n C71 N69 G74 sing 96 n n N69 C65 G74 sing 97 n n C65 O66 G74 doub 98 n n N49 C39 G74 sing 99 n n C39 O47 G74 doub 100 n n C39 O37 G74 sing 101 n n O37 C1 G74 sing 102 n n C1 C2 G74 sing 103 n n C1 C4 G74 sing 104 n n C1 C6 G74 sing 105 n n C82 H821 G74 sing 106 n n C82 H822 G74 sing 107 n n C3 H31C G74 sing 108 n n C3 H32C G74 sing 109 n n C5 H51C G74 sing 110 n n C5 H52C G74 sing 111 n n C5 H53C G74 sing 112 n n C63 H631 G74 sing 113 n n C63 H632 G74 sing 114 n n C57 H57 G74 sing 115 n n C59 H591 G74 sing 116 n n C59 H592 G74 sing 117 n n N49 H49 G74 sing 118 n n C61 H61 G74 sing 119 n n C73 H731 G74 sing 120 n n C73 H732 G74 sing 121 n n C71 H711 G74 sing 122 n n C71 H712 G74 sing 123 n n N69 H69 G74 sing 124 n n C2 H21C G74 sing 125 n n C2 H22C G74 sing 126 n n C2 H23C G74 sing 127 n n C4 H41C G74 sing 128 n n C4 H42C G74 sing 129 n n C4 H43C G74 sing 130 n n C6 H61C G74 sing 131 n n C6 H62C G74 sing 132 n n C6 H63C G74 sing 133 n n # _atom_sites.entry_id 3ZZ5 _atom_sites.fract_transf_matrix[1][1] 0.013007 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00633 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G74 A 1 1181 1181 G74 G74 . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O88 G74 . . . B 2 -19.741 9.497 -20.261 1 70.16 ? O88 G74 1181 A 1 HETATM 2 C C84 G74 . . . B 2 -18.734 10.159 -20.036 1 67.81 ? C84 G74 1181 A 1 HETATM 3 O O86 G74 . . . B 2 -18.767 11.296 -19.096 1 68.3 ? O86 G74 1181 A 1 HETATM 4 C C3 G74 . . . B 2 -18.992 11.137 -17.675 1 67.79 ? C3 G74 1181 A 1 HETATM 5 C C5 G74 . . . B 2 -19.155 9.681 -17.241 1 65.78 ? C5 G74 1181 A 1 HETATM 6 C C82 G74 . . . B 2 -17.463 9.764 -20.741 1 65.21 ? C82 G74 1181 A 1 HETATM 7 C C63 G74 . . . B 2 -17.757 8.824 -21.927 1 59.93 ? C63 G74 1181 A 1 HETATM 8 C C57 G74 . . . B 2 -17.895 9.677 -23.196 1 63.76 ? C57 G74 1181 A 1 HETATM 9 C C59 G74 . . . B 2 -18.344 8.857 -24.395 1 64.13 ? C59 G74 1181 A 1 HETATM 10 C C61 G74 . . . B 2 -19.851 9.017 -24.506 1 64.69 ? C61 G74 1181 A 1 HETATM 11 C C73 G74 . . . B 2 -20.284 10.063 -25.535 1 64.39 ? C73 G74 1181 A 1 HETATM 12 C C71 G74 . . . B 2 -21.1 9.329 -26.607 1 66.13 ? C71 G74 1181 A 1 HETATM 13 N N69 G74 . . . B 2 -20.997 7.952 -26.135 1 67.06 ? N69 G74 1181 A 1 HETATM 14 C C65 G74 . . . B 2 -20.443 7.756 -25.02 1 65.4 ? C65 G74 1181 A 1 HETATM 15 O O66 G74 . . . B 2 -20.403 6.721 -24.392 1 64.46 ? O66 G74 1181 A 1 HETATM 16 N N49 G74 . . . B 2 -16.543 10.132 -23.506 1 66.03 ? N49 G74 1181 A 1 HETATM 17 C C39 G74 . . . B 2 -16.098 11.375 -23.217 1 67.49 ? C39 G74 1181 A 1 HETATM 18 O O47 G74 . . . B 2 -16.81 12.22 -22.682 1 67.13 ? O47 G74 1181 A 1 HETATM 19 O O37 G74 . . . B 2 -14.715 11.764 -23.515 1 66.7 ? O37 G74 1181 A 1 HETATM 20 C C1 G74 . . . B 2 -14.018 11.451 -24.731 1 67.7 ? C1 G74 1181 A 1 HETATM 21 C C2 G74 . . . B 2 -12.541 11.206 -24.39 1 67.3 ? C2 G74 1181 A 1 HETATM 22 C C4 G74 . . . B 2 -14.597 10.202 -25.398 1 67.29 ? C4 G74 1181 A 1 HETATM 23 C C6 G74 . . . B 2 -14.155 12.643 -25.677 1 67.64 ? C6 G74 1181 A 1 # _model_server_stats.io_time_ms 111 _model_server_stats.parse_time_ms 79 _model_server_stats.create_model_time_ms 63 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #