data_3ZZ6 # _model_server_result.job_id 8Vt7yX5lEiF6kg5hGVfidw _model_server_result.datetime_utc '2024-10-16 08:56:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zz6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1181}' # _entry.id 3ZZ6 # _exptl.entry_id 3ZZ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 509.594 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ETHYL (4R)-4-({N-[(BENZYLOXY)CARBONYL]-L-PHENYLALANYL}AMINO)-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.63 _cell.angle_gamma 90 _cell.entry_id 3ZZ6 _cell.length_a 76.92 _cell.length_b 64.09 _cell.length_c 39.54 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZZ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_454 -x-1,y,-z-1 -1 0 0 0 1 0 0 0 -1 -59.197096 0 -35.345584 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 148 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 147 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C63 _struct_conn.ptnr2_label_comp_id G75 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id G75 _struct_conn.ptnr2_auth_seq_id 1181 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.803 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C28 H35 N3 O6' _chem_comp.formula_weight 509.594 _chem_comp.id G75 _chem_comp.mon_nstd_flag . _chem_comp.name 'ETHYL (4R)-4-({N-[(BENZYLOXY)CARBONYL]-L-PHENYLALANYL}AMINO)-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O88 C84 G75 doub 83 n n C84 O86 G75 sing 84 n n C84 C82 G75 sing 85 n n O86 C3 G75 sing 86 n n C3 C5 G75 sing 87 n n C82 C63 G75 sing 88 n n C63 C57 G75 sing 89 n n C57 C59 G75 sing 90 n n C57 N49 G75 sing 91 n n C59 C61 G75 sing 92 n n C61 C65 G75 sing 93 n n C61 C73 G75 sing 94 n n C65 O66 G75 doub 95 n n C65 N69 G75 sing 96 n n N69 C71 G75 sing 97 n n C71 C73 G75 sing 98 n n N49 C39 G75 sing 99 n n C39 O47 G75 doub 100 n n C39 C37 G75 sing 101 n n C37 C41 G75 sing 102 n n C37 N33 G75 sing 103 n n C41 C51 G75 sing 104 n n C51 C55 G75 sing 105 n y C51 C53 G75 doub 106 n y C55 C11 G75 doub 107 n y C11 C9 G75 sing 108 n y C9 C7 G75 doub 109 n y C7 C53 G75 sing 110 n y N33 C31 G75 sing 111 n n C31 O35 G75 doub 112 n n C31 O1 G75 sing 113 n n O1 C1 G75 sing 114 n n C1 C2 G75 sing 115 n n C2 C4 G75 sing 116 n y C2 C10 G75 doub 117 n y C4 C6 G75 doub 118 n y C6 C8 G75 sing 119 n y C8 C12 G75 doub 120 n y C12 C10 G75 sing 121 n y C82 H821 G75 sing 122 n n C82 H822 G75 sing 123 n n C3 H31C G75 sing 124 n n C3 H32C G75 sing 125 n n C5 H51C G75 sing 126 n n C5 H52C G75 sing 127 n n C5 H53C G75 sing 128 n n C63 H631 G75 sing 129 n n C63 H632 G75 sing 130 n n C57 H57 G75 sing 131 n n C59 H591 G75 sing 132 n n C59 H592 G75 sing 133 n n N49 H49 G75 sing 134 n n C61 H61 G75 sing 135 n n C73 H731 G75 sing 136 n n C73 H732 G75 sing 137 n n N69 H69 G75 sing 138 n n C71 H711 G75 sing 139 n n C71 H712 G75 sing 140 n n C37 H37 G75 sing 141 n n C41 H411 G75 sing 142 n n C41 H412 G75 sing 143 n n N33 H33 G75 sing 144 n n C55 H55 G75 sing 145 n n C53 H53 G75 sing 146 n n C11 H11 G75 sing 147 n n C9 H9 G75 sing 148 n n C7 H7 G75 sing 149 n n C1 H11C G75 sing 150 n n C1 H12C G75 sing 151 n n C4 H4 G75 sing 152 n n C10 H10 G75 sing 153 n n C6 H6 G75 sing 154 n n C8 H8 G75 sing 155 n n C12 H12 G75 sing 156 n n # _atom_sites.entry_id 3ZZ6 _atom_sites.fract_transf_matrix[1][1] 0.013001 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006519 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015603 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028292 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G75 A 1 1181 1181 G75 G75 . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O88 G75 . . . B 2 -18.956 9.309 -18.314 1 60.77 ? O88 G75 1181 A 1 HETATM 2 C C84 G75 . . . B 2 -18.699 10.379 -18.898 1 61.08 ? C84 G75 1181 A 1 HETATM 3 O O86 G75 . . . B 2 -19.057 11.614 -18.189 1 61.45 ? O86 G75 1181 A 1 HETATM 4 C C3 G75 . . . B 2 -18.883 11.71 -16.767 1 61.58 ? C3 G75 1181 A 1 HETATM 5 C C5 G75 . . . B 2 -19.922 12.599 -16.111 1 60.8 ? C5 G75 1181 A 1 HETATM 6 C C82 G75 . . . B 2 -18.021 10.452 -20.283 1 57.85 ? C82 G75 1181 A 1 HETATM 7 C C63 G75 . . . B 2 -18.092 9.143 -21.087 1 53.18 ? C63 G75 1181 A 1 HETATM 8 C C57 G75 . . . B 2 -18.325 9.374 -22.596 1 54.06 ? C57 G75 1181 A 1 HETATM 9 C C59 G75 . . . B 2 -19.101 8.255 -23.334 1 54.81 ? C59 G75 1181 A 1 HETATM 10 C C61 G75 . . . B 2 -19.532 8.691 -24.745 1 55.03 ? C61 G75 1181 A 1 HETATM 11 C C65 G75 . . . B 2 -20.484 7.742 -25.421 1 58.59 ? C65 G75 1181 A 1 HETATM 12 O O66 G75 . . . B 2 -20.379 6.408 -25.335 1 57.32 ? O66 G75 1181 A 1 HETATM 13 N N69 G75 . . . B 2 -21.379 8.381 -26.076 1 57.08 ? N69 G75 1181 A 1 HETATM 14 C C71 G75 . . . B 2 -21.423 9.832 -25.861 1 57.51 ? C71 G75 1181 A 1 HETATM 15 C C73 G75 . . . B 2 -20.332 10.003 -24.787 1 55.29 ? C73 G75 1181 A 1 HETATM 16 N N49 G75 . . . B 2 -16.994 9.422 -23.189 1 55.31 ? N49 G75 1181 A 1 HETATM 17 C C39 G75 . . . B 2 -16.687 10.265 -24.186 1 58.25 ? C39 G75 1181 A 1 HETATM 18 O O47 G75 . . . B 2 -17.49 11.044 -24.662 1 58.06 ? O47 G75 1181 A 1 HETATM 19 C C37 G75 . . . B 2 -15.28 10.271 -24.724 1 60.11 ? C37 G75 1181 A 1 HETATM 20 C C41 G75 . . . B 2 -14.551 11.375 -23.94 1 60.03 ? C41 G75 1181 A 1 HETATM 21 C C51 G75 . . . B 2 -13.13 11.505 -24.411 1 62.58 ? C51 G75 1181 A 1 HETATM 22 C C55 G75 . . . B 2 -12.145 10.685 -23.864 1 61.55 ? C55 G75 1181 A 1 HETATM 23 C C11 G75 . . . B 2 -10.833 10.811 -24.313 1 63.01 ? C11 G75 1181 A 1 HETATM 24 C C9 G75 . . . B 2 -10.497 11.737 -25.302 1 63.82 ? C9 G75 1181 A 1 HETATM 25 C C7 G75 . . . B 2 -11.481 12.562 -25.855 1 64.19 ? C7 G75 1181 A 1 HETATM 26 C C53 G75 . . . B 2 -12.806 12.445 -25.404 1 63.58 ? C53 G75 1181 A 1 HETATM 27 N N33 G75 . . . B 2 -15.187 10.614 -26.156 1 61.35 ? N33 G75 1181 A 1 HETATM 28 C C31 G75 . . . B 2 -15.949 10.202 -27.204 1 61.78 ? C31 G75 1181 A 1 HETATM 29 O O35 G75 . . . B 2 -16.909 9.426 -27.13 1 60.53 ? O35 G75 1181 A 1 HETATM 30 O O1 G75 . . . B 2 -15.599 10.732 -28.533 1 62.15 ? O1 G75 1181 A 1 HETATM 31 C C1 G75 . . . B 2 -16.343 10.363 -29.698 1 64.3 ? C1 G75 1181 A 1 HETATM 32 C C2 G75 . . . B 2 -15.455 9.863 -30.831 1 65.51 ? C2 G75 1181 A 1 HETATM 33 C C4 G75 . . . B 2 -15.586 8.549 -31.302 1 64.67 ? C4 G75 1181 A 1 HETATM 34 C C6 G75 . . . B 2 -14.792 8.068 -32.354 1 65.01 ? C6 G75 1181 A 1 HETATM 35 C C8 G75 . . . B 2 -13.842 8.906 -32.945 1 65.68 ? C8 G75 1181 A 1 HETATM 36 C C12 G75 . . . B 2 -13.705 10.226 -32.477 1 66.95 ? C12 G75 1181 A 1 HETATM 37 C C10 G75 . . . B 2 -14.505 10.701 -31.42 1 66.21 ? C10 G75 1181 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 37 #