data_3ZZ7 # _model_server_result.job_id pX_HCC3qFjjzPkwjjpdXvA _model_server_result.datetime_utc '2024-10-12 14:32:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zz7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1181}' # _entry.id 3ZZ7 # _exptl.entry_id 3ZZ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 475.578 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ETHYL (4R)-4-{[N-(TERT-BUTOXYCARBONYL)-L-PHENYLALANYL]AMINO}-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.33 _cell.angle_gamma 90 _cell.entry_id 3ZZ7 _cell.length_a 77.21 _cell.length_b 64.17 _cell.length_c 39.34 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZZ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 59.761116 0 35.258645 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 148 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 147 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C63 _struct_conn.ptnr2_label_comp_id G81 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id G81 _struct_conn.ptnr2_auth_seq_id 1181 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.821 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C25 H37 N3 O6' _chem_comp.formula_weight 475.578 _chem_comp.id G81 _chem_comp.mon_nstd_flag . _chem_comp.name 'ETHYL (4R)-4-{[N-(TERT-BUTOXYCARBONYL)-L-PHENYLALANYL]AMINO}-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O35 C31 G81 doub 83 n n C31 O1 G81 sing 84 n n C31 N33 G81 sing 85 n n O1 C1 G81 sing 86 n n C1 C2 G81 sing 87 n n C1 C4 G81 sing 88 n n C1 C6 G81 sing 89 n n N33 C37 G81 sing 90 n n C37 C41 G81 sing 91 n n C37 C39 G81 sing 92 n n C41 C51 G81 sing 93 n n C51 C53 G81 sing 94 n y C51 C55 G81 doub 95 n y C53 C7 G81 doub 96 n y C7 C9 G81 sing 97 n y C9 C11 G81 doub 98 n y C11 C55 G81 sing 99 n y C39 O47 G81 doub 100 n n C39 N49 G81 sing 101 n n N49 C57 G81 sing 102 n n C57 C59 G81 sing 103 n n C57 C63 G81 sing 104 n n C59 C61 G81 sing 105 n n C61 C73 G81 sing 106 n n C61 C65 G81 sing 107 n n C73 C71 G81 sing 108 n n C71 N69 G81 sing 109 n n N69 C65 G81 sing 110 n n C65 O66 G81 doub 111 n n C63 C82 G81 sing 112 n n C82 C84 G81 sing 113 n n C84 O88 G81 doub 114 n n C84 O86 G81 sing 115 n n O86 C3 G81 sing 116 n n C3 C5 G81 sing 117 n n N33 H33 G81 sing 118 n n C2 H21C G81 sing 119 n n C2 H22C G81 sing 120 n n C2 H23C G81 sing 121 n n C4 H41C G81 sing 122 n n C4 H42C G81 sing 123 n n C4 H43C G81 sing 124 n n C6 H61C G81 sing 125 n n C6 H62C G81 sing 126 n n C6 H63C G81 sing 127 n n C37 H37 G81 sing 128 n n C41 H411 G81 sing 129 n n C41 H412 G81 sing 130 n n C53 H53 G81 sing 131 n n C55 H55 G81 sing 132 n n C7 H7 G81 sing 133 n n C9 H9 G81 sing 134 n n C11 H11 G81 sing 135 n n N49 H49 G81 sing 136 n n C57 H57 G81 sing 137 n n C59 H591 G81 sing 138 n n C59 H592 G81 sing 139 n n C63 H631 G81 sing 140 n n C63 H632 G81 sing 141 n n C61 H61 G81 sing 142 n n C73 H731 G81 sing 143 n n C73 H732 G81 sing 144 n n C71 H711 G81 sing 145 n n C71 H712 G81 sing 146 n n N69 H69 G81 sing 147 n n C82 H821 G81 sing 148 n n C82 H822 G81 sing 149 n n C3 H31C G81 sing 150 n n C3 H32C G81 sing 151 n n C5 H51C G81 sing 152 n n C5 H52C G81 sing 153 n n C5 H53C G81 sing 154 n n # _atom_sites.entry_id 3ZZ7 _atom_sites.fract_transf_matrix[1][1] 0.012952 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00641 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015584 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G81 A 1 1181 1181 G81 G81 . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O35 G81 . . . B 2 16.789 9.531 27.009 1 55.86 ? O35 G81 1181 A 1 HETATM 2 C C31 G81 . . . B 2 15.851 10.348 27.051 1 57 ? C31 G81 1181 A 1 HETATM 3 O O1 G81 . . . B 2 15.424 10.98 28.294 1 56.51 ? O1 G81 1181 A 1 HETATM 4 C C1 G81 . . . B 2 15.985 10.849 29.582 1 55.82 ? C1 G81 1181 A 1 HETATM 5 C C2 G81 . . . B 2 17.469 11.185 29.486 1 56.4 ? C2 G81 1181 A 1 HETATM 6 C C4 G81 . . . B 2 15.268 11.862 30.476 1 56.66 ? C4 G81 1181 A 1 HETATM 7 C C6 G81 . . . B 2 15.731 9.44 30.099 1 55 ? C6 G81 1181 A 1 HETATM 8 N N33 G81 . . . B 2 15.112 10.785 26.024 1 55.97 ? N33 G81 1181 A 1 HETATM 9 C C37 G81 . . . B 2 15.216 10.421 24.631 1 54.17 ? C37 G81 1181 A 1 HETATM 10 C C41 G81 . . . B 2 14.399 11.453 23.881 1 56.3 ? C41 G81 1181 A 1 HETATM 11 C C51 G81 . . . B 2 13.015 11.377 24.476 1 60.18 ? C51 G81 1181 A 1 HETATM 12 C C53 G81 . . . B 2 12.173 10.318 24.143 1 59.69 ? C53 G81 1181 A 1 HETATM 13 C C7 G81 . . . B 2 10.893 10.259 24.702 1 61.6 ? C7 G81 1181 A 1 HETATM 14 C C9 G81 . . . B 2 10.453 11.246 25.59 1 61.28 ? C9 G81 1181 A 1 HETATM 15 C C11 G81 . . . B 2 11.297 12.302 25.938 1 61.32 ? C11 G81 1181 A 1 HETATM 16 C C55 G81 . . . B 2 12.578 12.367 25.378 1 62.1 ? C55 G81 1181 A 1 HETATM 17 C C39 G81 . . . B 2 16.622 10.5 24.167 1 53.82 ? C39 G81 1181 A 1 HETATM 18 O O47 G81 . . . B 2 17.35 11.406 24.524 1 53.22 ? O47 G81 1181 A 1 HETATM 19 N N49 G81 . . . B 2 16.985 9.515 23.368 1 49.98 ? N49 G81 1181 A 1 HETATM 20 C C57 G81 . . . B 2 18.317 9.439 22.832 1 48.25 ? C57 G81 1181 A 1 HETATM 21 C C59 G81 . . . B 2 18.953 8.369 23.73 1 48.33 ? C59 G81 1181 A 1 HETATM 22 C C61 G81 . . . B 2 20.366 8.705 24.197 1 49.18 ? C61 G81 1181 A 1 HETATM 23 C C73 G81 . . . B 2 20.565 10.067 24.895 1 48.95 ? C73 G81 1181 A 1 HETATM 24 C C71 G81 . . . B 2 21.592 9.812 26.013 1 49.95 ? C71 G81 1181 A 1 HETATM 25 N N69 G81 . . . B 2 21.52 8.356 26.121 1 47.76 ? N69 G81 1181 A 1 HETATM 26 C C65 G81 . . . B 2 20.897 7.733 25.21 1 49.87 ? C65 G81 1181 A 1 HETATM 27 O O66 G81 . . . B 2 20.754 6.515 25.109 1 46.45 ? O66 G81 1181 A 1 HETATM 28 C C63 G81 . . . B 2 18.105 9.061 21.363 1 46.1 ? C63 G81 1181 A 1 HETATM 29 C C82 G81 . . . B 2 17.253 10.104 20.614 1 51.05 ? C82 G81 1181 A 1 HETATM 30 C C84 G81 . . . B 2 17.976 11.367 20.163 1 54.04 ? C84 G81 1181 A 1 HETATM 31 O O88 G81 . . . B 2 17.452 12.435 20.404 1 54.92 ? O88 G81 1181 A 1 HETATM 32 O O86 G81 . . . B 2 19.252 11.373 19.426 1 55.17 ? O86 G81 1181 A 1 HETATM 33 C C3 G81 . . . B 2 19.425 12.168 18.235 1 55.65 ? C3 G81 1181 A 1 HETATM 34 C C5 G81 . . . B 2 19.187 11.36 16.965 1 53.7 ? C5 G81 1181 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 34 #