data_3ZZ8 # _model_server_result.job_id ddk3j97FA0Plg27j-qYQFg _model_server_result.datetime_utc '2024-10-12 14:27:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zz8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1181}' # _entry.id 3ZZ8 # _exptl.entry_id 3ZZ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 694.814 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ETHYL (5S,8S,11R)-8-BENZYL-5-(3-TERT-BUTOXY-3-OXOPROPYL)-3,6,9-TRIOXO-11-{[(3S)-2-OXOPYRROLIDIN-3-YL]METHYL}-1-PHENYL-2-OXA-4,7,10-TRIAZATETRADECAN-14-OATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.54 _cell.angle_gamma 90 _cell.entry_id 3ZZ8 _cell.length_a 77.44 _cell.length_b 63.73 _cell.length_c 39.38 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZZ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_454 -x-1,y,-z-1 -1 0 0 0 1 0 0 0 -1 -59.84413 0 -35.23024 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 148 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 147 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C63 _struct_conn.ptnr2_label_comp_id G82 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id G82 _struct_conn.ptnr2_auth_seq_id 1181 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.795 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C37 H50 N4 O9' _chem_comp.formula_weight 694.814 _chem_comp.id G82 _chem_comp.mon_nstd_flag . _chem_comp.name 'ETHYL (5S,8S,11R)-8-BENZYL-5-(3-TERT-BUTOXY-3-OXOPROPYL)-3,6,9-TRIOXO-11-{[(3S)-2-OXOPYRROLIDIN-3-YL]METHYL}-1-PHENYL-2-OXA-4,7,10-TRIAZATETRADECAN-14-OATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O88 C84 G82 doub 83 n n C84 O86 G82 sing 84 n n C84 C82 G82 sing 85 n n O86 C3 G82 sing 86 n n C3 C5 G82 sing 87 n n C82 C63 G82 sing 88 n n C63 C57 G82 sing 89 n n C57 C59 G82 sing 90 n n C57 N49 G82 sing 91 n n C59 C61 G82 sing 92 n n C61 C73 G82 sing 93 n n C61 C65 G82 sing 94 n n C73 C71 G82 sing 95 n n C71 N69 G82 sing 96 n n N69 C65 G82 sing 97 n n C65 O66 G82 doub 98 n n N49 C39 G82 sing 99 n n C39 O47 G82 doub 100 n n C39 C37 G82 sing 101 n n C37 C41 G82 sing 102 n n C37 N33 G82 sing 103 n n C41 C51 G82 sing 104 n n C51 C55 G82 sing 105 n y C51 C53 G82 doub 106 n y C55 C11 G82 doub 107 n y C11 C9 G82 sing 108 n y C9 C7 G82 doub 109 n y C7 C53 G82 sing 110 n y N33 C31 G82 sing 111 n n C31 O35 G82 doub 112 n n C31 C23 G82 sing 113 n n C23 C25 G82 sing 114 n n C23 N21 G82 sing 115 n n C25 C15 G82 sing 116 n n C15 C14 G82 sing 117 n n C14 O2 G82 sing 118 n n C14 O1 G82 doub 119 n n O2 C29 G82 sing 120 n n C29 C45 G82 sing 121 n n C29 C43 G82 sing 122 n n C29 C12 G82 sing 123 n n N21 C17 G82 sing 124 n n C17 O19 G82 doub 125 n n C17 O15 G82 sing 126 n n O15 C13 G82 sing 127 n n C13 C4 G82 sing 128 n n C4 C2 G82 sing 129 n y C4 C6 G82 doub 130 n y C2 C1 G82 doub 131 n y C1 C10 G82 sing 132 n y C10 C8 G82 doub 133 n y C8 C6 G82 sing 134 n y C82 H821 G82 sing 135 n n C82 H822 G82 sing 136 n n C3 H31C G82 sing 137 n n C3 H32C G82 sing 138 n n C5 H51C G82 sing 139 n n C5 H52C G82 sing 140 n n C5 H53C G82 sing 141 n n C63 H631 G82 sing 142 n n C63 H632 G82 sing 143 n n C57 H57 G82 sing 144 n n C59 H591 G82 sing 145 n n C59 H592 G82 sing 146 n n N49 H49 G82 sing 147 n n C61 H61 G82 sing 148 n n C73 H731 G82 sing 149 n n C73 H732 G82 sing 150 n n C71 H711 G82 sing 151 n n C71 H712 G82 sing 152 n n N69 H69 G82 sing 153 n n C37 H37 G82 sing 154 n n C41 H411 G82 sing 155 n n C41 H412 G82 sing 156 n n N33 H33 G82 sing 157 n n C55 H55 G82 sing 158 n n C53 H53 G82 sing 159 n n C11 H11 G82 sing 160 n n C9 H9 G82 sing 161 n n C7 H7 G82 sing 162 n n C23 H23 G82 sing 163 n n C25 H251 G82 sing 164 n n C25 H252 G82 sing 165 n n N21 H21 G82 sing 166 n n C15 H151 G82 sing 167 n n C15 H152 G82 sing 168 n n C45 H451 G82 sing 169 n n C45 H452 G82 sing 170 n n C45 H453 G82 sing 171 n n C43 H431 G82 sing 172 n n C43 H432 G82 sing 173 n n C43 H433 G82 sing 174 n n C12 H121 G82 sing 175 n n C12 H122 G82 sing 176 n n C12 H123 G82 sing 177 n n C13 H131 G82 sing 178 n n C13 H132 G82 sing 179 n n C2 H2 G82 sing 180 n n C6 H6 G82 sing 181 n n C1 H1 G82 sing 182 n n C10 H10 G82 sing 183 n n C8 H8 G82 sing 184 n n # _atom_sites.entry_id 3ZZ8 _atom_sites.fract_transf_matrix[1][1] 0.012913 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00645 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028385 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G82 A 1 1181 1181 G82 G82 . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . C 3 HOH A 52 2052 2052 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O88 G82 . . . B 2 -18.97 9.542 -17.386 1 55 ? O88 G82 1181 A 1 HETATM 2 C C84 G82 . . . B 2 -18.734 10.63 -17.953 1 55.4 ? C84 G82 1181 A 1 HETATM 3 O O86 G82 . . . B 2 -19.253 11.831 -17.322 1 57.55 ? O86 G82 1181 A 1 HETATM 4 C C3 G82 . . . B 2 -18.93 12.115 -15.955 1 55.74 ? C3 G82 1181 A 1 HETATM 5 C C5 G82 . . . B 2 -20.133 12.751 -15.298 1 55.11 ? C5 G82 1181 A 1 HETATM 6 C C82 G82 . . . B 2 -17.917 10.826 -19.23 1 53.68 ? C82 G82 1181 A 1 HETATM 7 C C63 G82 . . . B 2 -17.688 9.576 -20.103 1 47.55 ? C63 G82 1181 A 1 HETATM 8 C C57 G82 . . . B 2 -17.722 9.999 -21.586 1 50.57 ? C57 G82 1181 A 1 HETATM 9 C C59 G82 . . . B 2 -18.561 9.045 -22.428 1 50.25 ? C59 G82 1181 A 1 HETATM 10 C C61 G82 . . . B 2 -18.574 9.429 -23.905 1 51.23 ? C61 G82 1181 A 1 HETATM 11 C C73 G82 . . . B 2 -18.938 10.881 -24.231 1 52.28 ? C73 G82 1181 A 1 HETATM 12 C C71 G82 . . . B 2 -20.042 10.864 -25.296 1 51.94 ? C71 G82 1181 A 1 HETATM 13 N N69 G82 . . . B 2 -20.381 9.449 -25.29 1 51.36 ? N69 G82 1181 A 1 HETATM 14 C C65 G82 . . . B 2 -19.668 8.687 -24.575 1 51.96 ? C65 G82 1181 A 1 HETATM 15 O O66 G82 . . . B 2 -19.841 7.386 -24.395 1 50.28 ? O66 G82 1181 A 1 HETATM 16 N N49 G82 . . . B 2 -16.366 9.978 -22.175 1 50.69 ? N49 G82 1181 A 1 HETATM 17 C C39 G82 . . . B 2 -15.783 11.129 -22.573 1 54.13 ? C39 G82 1181 A 1 HETATM 18 O O47 G82 . . . B 2 -16.342 12.215 -22.453 1 52.82 ? O47 G82 1181 A 1 HETATM 19 C C37 G82 . . . B 2 -14.39 11.08 -23.17 1 55.02 ? C37 G82 1181 A 1 HETATM 20 C C41 G82 . . . B 2 -13.517 12.001 -22.298 1 57.51 ? C41 G82 1181 A 1 HETATM 21 C C51 G82 . . . B 2 -12.042 12.161 -22.634 1 59.54 ? C51 G82 1181 A 1 HETATM 22 C C55 G82 . . . B 2 -11.301 11.178 -23.304 1 60.05 ? C55 G82 1181 A 1 HETATM 23 C C11 G82 . . . B 2 -9.948 11.393 -23.574 1 61.64 ? C11 G82 1181 A 1 HETATM 24 C C9 G82 . . . B 2 -9.334 12.587 -23.188 1 61.74 ? C9 G82 1181 A 1 HETATM 25 C C7 G82 . . . B 2 -10.063 13.567 -22.516 1 60.85 ? C7 G82 1181 A 1 HETATM 26 C C53 G82 . . . B 2 -11.415 13.355 -22.244 1 60.06 ? C53 G82 1181 A 1 HETATM 27 N N33 G82 . . . B 2 -14.315 11.606 -24.534 1 56.03 ? N33 G82 1181 A 1 HETATM 28 C C31 G82 . . . B 2 -14.99 11.148 -25.611 1 58.65 ? C31 G82 1181 A 1 HETATM 29 O O35 G82 . . . B 2 -15.792 10.214 -25.591 1 54.54 ? O35 G82 1181 A 1 HETATM 30 C C23 G82 . . . B 2 -14.699 11.88 -26.909 1 61.64 ? C23 G82 1181 A 1 HETATM 31 C C25 G82 . . . B 2 -15.4 13.236 -26.845 1 64.03 ? C25 G82 1181 A 1 HETATM 32 C C15 G82 . . . B 2 -15.782 13.878 -28.182 1 66.63 ? C15 G82 1181 A 1 HETATM 33 C C14 G82 . . . B 2 -17.136 14.53 -27.974 1 68.46 ? C14 G82 1181 A 1 HETATM 34 O O2 G82 . . . B 2 -17.281 15.603 -26.976 1 68.1 ? O2 G82 1181 A 1 HETATM 35 C C29 G82 . . . B 2 -16.919 16.986 -27.129 1 68.01 ? C29 G82 1181 A 1 HETATM 36 C C45 G82 . . . B 2 -17.902 17.769 -26.259 1 67.56 ? C45 G82 1181 A 1 HETATM 37 C C43 G82 . . . B 2 -17.027 17.408 -28.601 1 66.98 ? C43 G82 1181 A 1 HETATM 38 C C12 G82 . . . B 2 -15.51 17.239 -26.583 1 67.25 ? C12 G82 1181 A 1 HETATM 39 O O1 G82 . . . B 2 -18.121 14.139 -28.601 1 69.25 ? O1 G82 1181 A 1 HETATM 40 N N21 G82 . . . B 2 -15.099 11.166 -28.135 1 64.63 ? N21 G82 1181 A 1 HETATM 41 C C17 G82 . . . B 2 -14.284 11.032 -29.205 1 68.37 ? C17 G82 1181 A 1 HETATM 42 O O19 G82 . . . B 2 -13.156 11.512 -29.241 1 68.87 ? O19 G82 1181 A 1 HETATM 43 O O15 G82 . . . B 2 -14.714 10.305 -30.403 1 71 ? O15 G82 1181 A 1 HETATM 44 C C13 G82 . . . B 2 -14.99 11.011 -31.621 1 75.31 ? C13 G82 1181 A 1 HETATM 45 C C4 G82 . . . B 2 -14.081 10.554 -32.751 1 77.88 ? C4 G82 1181 A 1 HETATM 46 C C2 G82 . . . B 2 -14.052 9.208 -33.152 1 79.01 ? C2 G82 1181 A 1 HETATM 47 C C1 G82 . . . B 2 -13.211 8.807 -34.204 1 79.11 ? C1 G82 1181 A 1 HETATM 48 C C10 G82 . . . B 2 -12.394 9.737 -34.857 1 79.02 ? C10 G82 1181 A 1 HETATM 49 C C8 G82 . . . B 2 -12.422 11.079 -34.46 1 79.42 ? C8 G82 1181 A 1 HETATM 50 C C6 G82 . . . B 2 -13.265 11.486 -33.414 1 79.19 ? C6 G82 1181 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 50 #