data_3ZZJ # _model_server_result.job_id vL56sxQWebZDEZdkss9k5A _model_server_result.datetime_utc '2024-11-14 07:37:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3zzj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1399}' # _entry.id 3ZZJ # _exptl.entry_id 3ZZJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ZZJ _cell.length_a 85.139 _cell.length_b 154.2 _cell.length_c 79.931 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZZJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 85.139 0 39.9655 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 246 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 246 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C4A _struct_conn.ptnr2_label_comp_id PLP _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PLP _struct_conn.ptnr2_auth_seq_id 1246 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.342 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 259 n n C1 C2 PEG sing 260 n n C1 H11 PEG sing 261 n n C1 H12 PEG sing 262 n n O1 HO1 PEG sing 263 n n C2 O2 PEG sing 264 n n C2 H21 PEG sing 265 n n C2 H22 PEG sing 266 n n O2 C3 PEG sing 267 n n C3 C4 PEG sing 268 n n C3 H31 PEG sing 269 n n C3 H32 PEG sing 270 n n C4 O4 PEG sing 271 n n C4 H41 PEG sing 272 n n C4 H42 PEG sing 273 n n O4 HO4 PEG sing 274 n n # _atom_sites.entry_id 3ZZJ _atom_sites.fract_transf_matrix[1][1] 0.011745 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012511 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLP A 1 1246 1246 PLP PLP . C 3 SO4 A 1 1397 1397 SO4 SO4 . D 3 SO4 A 1 1398 1398 SO4 SO4 . E 4 PEG A 1 1399 1399 PEG PEG . F 4 PEG A 1 1400 1400 PEG PEG . G 5 BME A 1 1401 1401 BME BME . H 6 GOL A 1 1402 1402 GOL GOL . I 6 GOL A 1 1403 1403 GOL GOL . J 6 GOL A 1 1404 1404 GOL GOL . K 6 GOL A 1 1405 1405 GOL GOL . L 6 GOL A 1 1406 1406 GOL GOL . M 7 HOH A 1 2001 2001 HOH HOH . M 7 HOH A 2 2002 2002 HOH HOH . M 7 HOH A 3 2003 2003 HOH HOH . M 7 HOH A 4 2004 2004 HOH HOH . M 7 HOH A 5 2005 2005 HOH HOH . M 7 HOH A 6 2006 2006 HOH HOH . M 7 HOH A 7 2007 2007 HOH HOH . M 7 HOH A 8 2008 2008 HOH HOH . M 7 HOH A 9 2009 2009 HOH HOH . M 7 HOH A 10 2010 2010 HOH HOH . M 7 HOH A 11 2011 2011 HOH HOH . M 7 HOH A 12 2012 2012 HOH HOH . M 7 HOH A 13 2013 2013 HOH HOH . M 7 HOH A 14 2014 2014 HOH HOH . M 7 HOH A 15 2015 2015 HOH HOH . M 7 HOH A 16 2016 2016 HOH HOH . M 7 HOH A 17 2017 2017 HOH HOH . M 7 HOH A 18 2018 2018 HOH HOH . M 7 HOH A 19 2019 2019 HOH HOH . M 7 HOH A 20 2020 2020 HOH HOH . M 7 HOH A 21 2021 2021 HOH HOH . M 7 HOH A 22 2022 2022 HOH HOH . M 7 HOH A 23 2023 2023 HOH HOH . M 7 HOH A 24 2024 2024 HOH HOH . M 7 HOH A 25 2025 2025 HOH HOH . M 7 HOH A 26 2026 2026 HOH HOH . M 7 HOH A 27 2027 2027 HOH HOH . M 7 HOH A 28 2028 2028 HOH HOH . M 7 HOH A 29 2029 2029 HOH HOH . M 7 HOH A 30 2030 2030 HOH HOH . M 7 HOH A 31 2031 2031 HOH HOH . M 7 HOH A 32 2032 2032 HOH HOH . M 7 HOH A 33 2033 2033 HOH HOH . M 7 HOH A 34 2034 2034 HOH HOH . M 7 HOH A 35 2035 2035 HOH HOH . M 7 HOH A 36 2036 2036 HOH HOH . M 7 HOH A 37 2037 2037 HOH HOH . M 7 HOH A 38 2038 2038 HOH HOH . M 7 HOH A 39 2039 2039 HOH HOH . M 7 HOH A 40 2040 2040 HOH HOH . M 7 HOH A 41 2041 2041 HOH HOH . M 7 HOH A 42 2042 2042 HOH HOH . M 7 HOH A 43 2043 2043 HOH HOH . M 7 HOH A 44 2044 2044 HOH HOH . M 7 HOH A 45 2045 2045 HOH HOH . M 7 HOH A 46 2046 2046 HOH HOH . M 7 HOH A 47 2047 2047 HOH HOH . M 7 HOH A 48 2048 2048 HOH HOH . M 7 HOH A 49 2049 2049 HOH HOH . M 7 HOH A 50 2050 2050 HOH HOH . M 7 HOH A 51 2051 2051 HOH HOH . M 7 HOH A 52 2052 2052 HOH HOH . M 7 HOH A 53 2053 2053 HOH HOH . M 7 HOH A 54 2054 2054 HOH HOH . M 7 HOH A 55 2055 2055 HOH HOH . M 7 HOH A 56 2056 2056 HOH HOH . M 7 HOH A 57 2057 2057 HOH HOH . M 7 HOH A 58 2058 2058 HOH HOH . M 7 HOH A 59 2059 2059 HOH HOH . M 7 HOH A 60 2060 2060 HOH HOH . M 7 HOH A 61 2061 2061 HOH HOH . M 7 HOH A 62 2062 2062 HOH HOH . M 7 HOH A 63 2063 2063 HOH HOH . M 7 HOH A 64 2064 2064 HOH HOH . M 7 HOH A 65 2065 2065 HOH HOH . M 7 HOH A 66 2066 2066 HOH HOH . M 7 HOH A 67 2067 2067 HOH HOH . M 7 HOH A 68 2068 2068 HOH HOH . M 7 HOH A 69 2069 2069 HOH HOH . M 7 HOH A 70 2070 2070 HOH HOH . M 7 HOH A 71 2071 2071 HOH HOH . M 7 HOH A 72 2072 2072 HOH HOH . M 7 HOH A 73 2073 2073 HOH HOH . M 7 HOH A 74 2074 2074 HOH HOH . M 7 HOH A 75 2075 2075 HOH HOH . M 7 HOH A 76 2076 2076 HOH HOH . M 7 HOH A 77 2077 2077 HOH HOH . M 7 HOH A 78 2078 2078 HOH HOH . M 7 HOH A 79 2079 2079 HOH HOH . M 7 HOH A 80 2080 2080 HOH HOH . M 7 HOH A 81 2081 2081 HOH HOH . M 7 HOH A 82 2082 2082 HOH HOH . M 7 HOH A 83 2083 2083 HOH HOH . M 7 HOH A 84 2084 2084 HOH HOH . M 7 HOH A 85 2085 2085 HOH HOH . M 7 HOH A 86 2086 2086 HOH HOH . M 7 HOH A 87 2087 2087 HOH HOH . M 7 HOH A 88 2088 2088 HOH HOH . M 7 HOH A 89 2089 2089 HOH HOH . M 7 HOH A 90 2090 2090 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 4 58.855 64.29 25.764 1 40.77 ? C1 PEG 1399 A 1 HETATM 2 O O1 PEG . . . E 4 57.5 64.362 26.225 1 40.2 ? O1 PEG 1399 A 1 HETATM 3 C C2 PEG . . . E 4 59.807 64.855 26.833 1 40.88 ? C2 PEG 1399 A 1 HETATM 4 O O2 PEG . . . E 4 61.227 64.56 26.656 1 41.3 ? O2 PEG 1399 A 1 HETATM 5 C C3 PEG . . . E 4 61.508 63.314 25.954 1 41.29 ? C3 PEG 1399 A 1 HETATM 6 C C4 PEG . . . E 4 62.759 62.622 26.523 1 41.48 ? C4 PEG 1399 A 1 HETATM 7 O O4 PEG . . . E 4 63.016 61.38 25.838 1 41.37 ? O4 PEG 1399 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #