data_430D
#
_model_server_result.job_id            gAxhNF_1XW0pHzBl-euDmQ 
_model_server_result.datetime_utc      '2025-01-03 07:27:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          430d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":36}' 
#
_entry.id    430D 
#
_exptl.entry_id    430D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            430D 
_cell.length_a            56.83 
_cell.length_b            56.83 
_cell.length_c            107.96 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 430D 
_symmetry.cell_setting             hexagonal 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A O3' A 26 A A 26 1_555 A P CBV 27 A CBV 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.607 ? 
covale ? covale2 A O3' CBV 27 A CBV 27 1_555 A P C 28 A C 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.588 ? 
metalc ? metalc1 A OP2 A 12 A A 12 1_555 F MG MG . A MG 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc2 A N4 C 13 A C 13 1_555 F MG MG . A MG 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? 
metalc ? metalc3 A P G 24 A G 24 1_555 D MG MG . A MG 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? 
metalc ? metalc4 A OP1 G 24 A G 24 1_555 D MG MG . A MG 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc5 A O5' G 24 A G 24 1_555 D MG MG . A MG 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? 
metalc ? metalc6 C MG MG . A MG 32 1_555 K O HOH . A HOH 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? 
hydrog WATSON-CRICK hydrog1 A N1 G 1 A G 1 1_555 A N3 C 29 A C 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N2 G 1 A G 1 1_555 A O2 C 29 A C 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A O6 G 1 A G 1 1_555 A N4 C 29 A C 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N1 G 2 A G 2 1_555 A N3 C 28 A C 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A N2 G 2 A G 2 1_555 A O2 C 28 A C 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A O6 G 2 A G 2 1_555 A N4 C 28 A C 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A N1 G 3 A G 3 1_555 A N3 CBV 27 A CBV 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A N2 G 3 A G 3 1_555 A O2 CBV 27 A CBV 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A O6 G 3 A G 3 1_555 A N4 CBV 27 A CBV 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A N3 U 4 A U 4 1_555 A N1 A 26 A A 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A O4 U 4 A U 4 1_555 A N6 A 26 A A 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A N1 G 5 A G 5 1_555 A N3 C 25 A C 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N2 G 5 A G 5 1_555 A O2 C 25 A C 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A O6 G 5 A G 5 1_555 A N4 C 25 A C 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 A N3 C 6 A C 6 1_555 A N1 G 24 A G 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 A N4 C 6 A C 6 1_555 A O6 G 24 A G 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 A O2 C 6 A C 6 1_555 A N2 G 24 A G 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'U-C MISPAIR' hydrog18 A O2 U 7 A U 7 1_555 A N4 C 23 A C 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'C-C MISPAIR' hydrog19 A O2 C 8 A C 8 1_555 A N4 C 23 A C 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_2_PAIR hydrog20 A N6 A 9 A A 9 1_555 A N7 A 21 A A 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_2_PAIR hydrog21 A N7 A 9 A A 9 1_555 A N6 A 21 A A 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'G-U MISPAIR' hydrog22 A N2 G 10 A G 10 1_555 A O4 U 11 A U 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'REVERSED HOOGSTEEN' hydrog23 A N3 U 11 A U 11 1_555 A N7 A 20 A A 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'REVERSED HOOGSTEEN' hydrog24 A O2 U 11 A U 11 1_555 A N6 A 20 A A 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'U-A PAIR' hydrog25 A O2 U 11 A U 11 1_555 A N6 A 21 A A 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_11_PAIR hydrog26 A N6 A 12 A A 12 1_555 A N3 G 19 A G 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_11_PAIR hydrog27 A N7 A 12 A A 12 1_555 A N2 G 19 A G 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog28 A N3 C 13 A C 13 1_555 A N1 G 18 A G 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog29 A N4 C 13 A C 13 1_555 A O6 G 18 A G 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog30 A O2 C 13 A C 13 1_555 A N2 G 18 A G 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'G-A MISPAIR' hydrog31 A N2 G 14 A G 14 1_555 A N7 A 17 A A 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     430D 
_atom_sites.fract_transf_matrix[1][1]    0.017596 
_atom_sites.fract_transf_matrix[1][2]    0.010159 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020319 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009263 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 31 31 MG MG . 
C 2 MG A 1 32 32 MG MG . 
D 2 MG A 1 33 33 MG MG . 
E 2 MG A 1 34 34 MG MG . 
F 2 MG A 1 35 35 MG MG . 
G 2 MG A 1 36 36 MG MG . 
H 2 MG A 1 37 37 MG MG . 
I 2 MG A 1 38 38 MG MG . 
J 2 MG A 1 39 39 MG MG . 
K 3 HOH A 1 101 101 HOH HOH . 
K 3 HOH A 2 102 102 HOH HOH . 
K 3 HOH A 3 103 103 HOH HOH . 
K 3 HOH A 4 104 104 HOH HOH . 
K 3 HOH A 5 105 105 HOH HOH . 
K 3 HOH A 6 106 106 HOH HOH . 
K 3 HOH A 7 107 107 HOH HOH . 
K 3 HOH A 8 108 108 HOH HOH . 
K 3 HOH A 9 109 109 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               12.387 
_atom_site.Cartn_y               13.157 
_atom_site.Cartn_z               64.428 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        70.45 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           36 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#