data_437D
#
_model_server_result.job_id            VMV6WcDYlhbC34zTJ-xSfQ 
_model_server_result.datetime_utc      '2025-03-09 04:10:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          437d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":100}' 
#
_entry.id    437D 
#
_exptl.entry_id    437D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            437D 
_cell.length_a            30.08 
_cell.length_b            30.08 
_cell.length_c            140.08 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 437D 
_symmetry.cell_setting             trigonal 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A O3' GTP 1 A GTP 1 1_555 A P G 2 A G 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.57 ? 
metalc ? metalc1 A O2B GTP 1 A GTP 1 1_555 B MG MG . A MG 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
metalc ? metalc2 A O3G GTP 1 A GTP 1 1_555 B MG MG . A MG 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc3 A OP1 G 2 A G 2 1_555 B MG MG . A MG 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
metalc ? metalc4 A O2' G 16 A G 16 1_555 C NA NA . A NA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? 
metalc ? metalc5 A N3 G 16 A G 16 1_555 C NA NA . A NA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? 
metalc ? metalc6 A OP2 A 21 A A 21 1_555 C NA NA . A NA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? 
metalc ? metalc7 A N7 A 21 A A 21 1_555 C NA NA . A NA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? 
metalc ? metalc8 B MG MG . A MG 100 1_555 D O HOH . A HOH 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc9 B MG MG . A MG 100 1_555 D O HOH . A HOH 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc10 B MG MG . A MG 100 1_555 D O HOH . A HOH 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
metalc ? metalc11 C NA NA . A NA 101 1_555 D O HOH . A HOH 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? 
hydrog WATSON-CRICK hydrog1 A N3 C 3 A C 3 1_555 A N1 G 18 A G 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N4 C 3 A C 3 1_555 A O6 G 18 A G 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A O2 C 3 A C 3 1_555 A N2 G 18 A G 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N1 G 4 A G 4 1_555 A N3 C 17 A C 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A N2 G 4 A G 4 1_555 A O2 C 17 A C 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A O6 G 4 A G 4 1_555 A N4 C 17 A C 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'G-A MISPAIR' hydrog7 A N2 G 4 A G 4 1_555 A N3 A 20 A A 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A N3 C 5 A C 5 1_555 A N1 G 16 A G 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A N4 C 5 A C 5 1_555 A O6 G 16 A G 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A O2 C 5 A C 5 1_555 A N2 G 16 A G 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A N1 G 6 A G 6 1_555 A N3 C 15 A C 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A N2 G 6 A G 6 1_555 A O2 C 15 A C 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A O6 G 6 A G 6 1_555 A N4 C 15 A C 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A N1 G 7 A G 7 1_555 A N3 C 14 A C 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 A N2 G 7 A G 7 1_555 A O2 C 14 A C 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 A O6 G 7 A G 7 1_555 A N4 C 14 A C 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_10_PAIR hydrog17 A N2 G 7 A G 7 1_555 A N1 A 24 A A 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_10_PAIR hydrog18 A N3 G 7 A G 7 1_555 A N6 A 24 A A 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'C-G PAIR' hydrog19 A N4 C 8 A C 8 1_555 A N7 G 12 A G 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'C-C MISPAIR' hydrog20 A O2 C 8 A C 8 1_555 A N4 C 26 A C 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog21 A N3 C 10 A C 10 1_555 A N1 G 28 A G 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog22 A N4 C 10 A C 10 1_555 A O6 G 28 A G 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog23 A O2 C 10 A C 10 1_555 A N2 G 28 A G 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog24 A N3 C 11 A C 11 1_555 A N1 G 27 A G 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog25 A N4 C 11 A C 11 1_555 A O6 G 27 A G 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog26 A O2 C 11 A C 11 1_555 A N2 G 27 A G 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog27 A N1 G 12 A G 12 1_555 A N3 C 26 A C 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog28 A N2 G 12 A G 12 1_555 A O2 C 26 A C 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog29 A O6 G 12 A G 12 1_555 A N4 C 26 A C 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'C-A MISPAIR' hydrog30 A O2 C 14 A C 14 1_555 A N6 A 25 A A 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'C-A MISPAIR' hydrog31 A O2 C 15 A C 15 1_555 A N6 A 23 A A 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     437D 
_atom_sites.fract_transf_matrix[1][1]    0.033245 
_atom_sites.fract_transf_matrix[1][2]    0.019194 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.038388 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007139 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 100 100 MG MG . 
C 3 NA A 1 101 101 NA NA . 
D 4 HOH A 1 102 102 HOH HOH . 
D 4 HOH A 2 103 103 HOH HOH . 
D 4 HOH A 3 104 104 HOH HOH . 
D 4 HOH A 4 105 105 HOH HOH . 
D 4 HOH A 5 106 106 HOH HOH . 
D 4 HOH A 6 107 107 HOH HOH . 
D 4 HOH A 7 108 108 HOH HOH . 
D 4 HOH A 8 109 109 HOH HOH . 
D 4 HOH A 9 110 110 HOH HOH . 
D 4 HOH A 10 111 111 HOH HOH . 
D 4 HOH A 11 112 112 HOH HOH . 
D 4 HOH A 12 113 113 HOH HOH . 
D 4 HOH A 13 114 114 HOH HOH . 
D 4 HOH A 14 115 115 HOH HOH . 
D 4 HOH A 15 116 116 HOH HOH . 
D 4 HOH A 16 117 117 HOH HOH . 
D 4 HOH A 17 118 118 HOH HOH . 
D 4 HOH A 18 119 119 HOH HOH . 
D 4 HOH A 19 120 120 HOH HOH . 
D 4 HOH A 20 121 121 HOH HOH . 
D 4 HOH A 21 122 122 HOH HOH . 
D 4 HOH A 22 123 123 HOH HOH . 
D 4 HOH A 23 124 124 HOH HOH . 
D 4 HOH A 24 125 125 HOH HOH . 
D 4 HOH A 25 126 126 HOH HOH . 
D 4 HOH A 26 127 127 HOH HOH . 
D 4 HOH A 27 128 128 HOH HOH . 
D 4 HOH A 28 129 129 HOH HOH . 
D 4 HOH A 29 130 130 HOH HOH . 
D 4 HOH A 30 131 131 HOH HOH . 
D 4 HOH A 31 132 132 HOH HOH . 
D 4 HOH A 32 134 134 HOH HOH . 
D 4 HOH A 33 135 135 HOH HOH . 
D 4 HOH A 34 136 136 HOH HOH . 
D 4 HOH A 35 137 137 HOH HOH . 
D 4 HOH A 36 138 138 HOH HOH . 
D 4 HOH A 37 139 139 HOH HOH . 
D 4 HOH A 38 140 140 HOH HOH . 
D 4 HOH A 39 141 141 HOH HOH . 
D 4 HOH A 40 142 142 HOH HOH . 
D 4 HOH A 41 143 143 HOH HOH . 
D 4 HOH A 42 144 144 HOH HOH . 
D 4 HOH A 43 145 145 HOH HOH . 
D 4 HOH A 44 146 146 HOH HOH . 
D 4 HOH A 45 147 147 HOH HOH . 
D 4 HOH A 46 148 148 HOH HOH . 
D 4 HOH A 47 149 149 HOH HOH . 
D 4 HOH A 48 150 150 HOH HOH . 
D 4 HOH A 49 151 151 HOH HOH . 
D 4 HOH A 50 152 152 HOH HOH . 
D 4 HOH A 51 154 154 HOH HOH . 
D 4 HOH A 52 155 155 HOH HOH . 
D 4 HOH A 53 156 156 HOH HOH . 
D 4 HOH A 54 157 157 HOH HOH . 
D 4 HOH A 55 158 158 HOH HOH . 
D 4 HOH A 56 159 159 HOH HOH . 
D 4 HOH A 57 160 160 HOH HOH . 
D 4 HOH A 58 161 161 HOH HOH . 
D 4 HOH A 59 162 162 HOH HOH . 
D 4 HOH A 60 163 163 HOH HOH . 
D 4 HOH A 61 164 164 HOH HOH . 
D 4 HOH A 62 165 165 HOH HOH . 
D 4 HOH A 63 167 167 HOH HOH . 
D 4 HOH A 64 168 168 HOH HOH . 
D 4 HOH A 65 169 169 HOH HOH . 
D 4 HOH A 66 170 170 HOH HOH . 
D 4 HOH A 67 171 171 HOH HOH . 
D 4 HOH A 68 172 172 HOH HOH . 
D 4 HOH A 69 173 173 HOH HOH . 
D 4 HOH A 70 174 174 HOH HOH . 
D 4 HOH A 71 175 175 HOH HOH . 
D 4 HOH A 72 177 177 HOH HOH . 
D 4 HOH A 73 178 178 HOH HOH . 
D 4 HOH A 74 179 179 HOH HOH . 
D 4 HOH A 75 180 180 HOH HOH . 
D 4 HOH A 76 181 181 HOH HOH . 
D 4 HOH A 77 182 182 HOH HOH . 
D 4 HOH A 78 183 183 HOH HOH . 
D 4 HOH A 79 185 185 HOH HOH . 
D 4 HOH A 80 186 186 HOH HOH . 
D 4 HOH A 81 187 187 HOH HOH . 
D 4 HOH A 82 188 188 HOH HOH . 
D 4 HOH A 83 190 190 HOH HOH . 
D 4 HOH A 84 191 191 HOH HOH . 
D 4 HOH A 85 192 192 HOH HOH . 
D 4 HOH A 86 193 193 HOH HOH . 
D 4 HOH A 87 194 194 HOH HOH . 
D 4 HOH A 88 195 195 HOH HOH . 
D 4 HOH A 89 196 196 HOH HOH . 
D 4 HOH A 90 197 197 HOH HOH . 
D 4 HOH A 91 198 198 HOH HOH . 
D 4 HOH A 92 199 199 HOH HOH . 
D 4 HOH A 93 200 200 HOH HOH . 
D 4 HOH A 94 202 202 HOH HOH . 
D 4 HOH A 95 203 203 HOH HOH . 
D 4 HOH A 96 205 205 HOH HOH . 
D 4 HOH A 97 206 206 HOH HOH . 
D 4 HOH A 98 209 209 HOH HOH . 
D 4 HOH A 99 210 210 HOH HOH . 
D 4 HOH A 100 212 212 HOH HOH . 
D 4 HOH A 101 214 214 HOH HOH . 
D 4 HOH A 102 216 216 HOH HOH . 
D 4 HOH A 103 217 217 HOH HOH . 
D 4 HOH A 104 218 218 HOH HOH . 
D 4 HOH A 105 219 219 HOH HOH . 
D 4 HOH A 106 220 220 HOH HOH . 
D 4 HOH A 107 221 221 HOH HOH . 
D 4 HOH A 108 222 222 HOH HOH . 
D 4 HOH A 109 223 223 HOH HOH . 
D 4 HOH A 110 224 224 HOH HOH . 
D 4 HOH A 111 225 225 HOH HOH . 
D 4 HOH A 112 226 226 HOH HOH . 
D 4 HOH A 113 228 228 HOH HOH . 
D 4 HOH A 114 229 229 HOH HOH . 
D 4 HOH A 115 230 230 HOH HOH . 
D 4 HOH A 116 232 232 HOH HOH . 
D 4 HOH A 117 233 233 HOH HOH . 
D 4 HOH A 118 234 234 HOH HOH . 
D 4 HOH A 119 235 235 HOH HOH . 
D 4 HOH A 120 236 236 HOH HOH . 
D 4 HOH A 121 237 237 HOH HOH . 
D 4 HOH A 122 238 238 HOH HOH . 
D 4 HOH A 123 239 239 HOH HOH . 
D 4 HOH A 124 240 240 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               18.954 
_atom_site.Cartn_y               31.796 
_atom_site.Cartn_z               27.778 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35.81 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           100 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           1 
#