data_485D
#
_model_server_result.job_id            crLauGV8GyAXj0phtfF6Kg 
_model_server_result.datetime_utc      '2025-01-10 20:06:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          485d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":19}' 
#
_entry.id    485D 
#
_exptl.entry_id    485D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            485D 
_cell.length_a            39.958 
_cell.length_b            39.958 
_cell.length_c            67.445 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 485D 
_symmetry.cell_setting             trigonal 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
hydrog WATSON-CRICK hydrog1 A N1 G 2 A G 2 1_555 B N3 DC 9 B DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N2 G 2 A G 2 1_555 B O2 DC 9 B DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A O6 G 2 A G 2 1_555 B N4 DC 9 B DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_28_PAIR hydrog4 A N3 U 3 A U 3 1_555 B O6 G 8 B G 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_28_PAIR hydrog5 A O2 U 3 A U 3 1_555 B N1 G 8 B G 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A N1 G 4 A G 4 1_555 B N3 C 7 B C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A N2 G 4 A G 4 1_555 B O2 C 7 B C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A O6 G 4 A G 4 1_555 B N4 C 7 B C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A N1 A 5 A A 5 1_555 B N3 U 6 B U 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A N6 A 5 A A 5 1_555 B O4 U 6 B U 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A N3 U 6 A U 6 1_555 B N1 A 5 B A 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A O4 U 6 A U 6 1_555 B N6 A 5 B A 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N3 C 7 A C 7 1_555 B N1 G 4 B G 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A N4 C 7 A C 7 1_555 B O6 G 4 B G 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 A O2 C 7 A C 7 1_555 B N2 G 4 B G 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_28_PAIR hydrog16 A N1 G 8 A G 8 1_555 B O2 U 3 B U 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_28_PAIR hydrog17 A O6 G 8 A G 8 1_555 B N3 U 3 B U 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 A N3 DC 9 A DC 9 1_555 B N1 G 2 B G 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 A N4 DC 9 A DC 9 1_555 B O6 G 2 B G 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 A O2 DC 9 A DC 9 1_555 B N2 G 2 B G 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 153 n n 
S O2 SO4 doub 154 n n 
S O3 SO4 sing 155 n n 
S O4 SO4 sing 156 n n 
#
_atom_sites.entry_id                     485D 
_atom_sites.fract_transf_matrix[1][1]    0.025026 
_atom_sites.fract_transf_matrix[1][2]    0.014449 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.028898 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014827 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 B 1 19 19 SO4 SO4 . 
D 3 HOH A 1 101 101 HOH HOH . 
D 3 HOH A 2 105 105 HOH HOH . 
D 3 HOH A 3 108 108 HOH HOH . 
D 3 HOH A 4 113 113 HOH HOH . 
D 3 HOH A 5 114 114 HOH HOH . 
D 3 HOH A 6 116 116 HOH HOH . 
D 3 HOH A 7 118 118 HOH HOH . 
D 3 HOH A 8 119 119 HOH HOH . 
D 3 HOH A 9 120 120 HOH HOH . 
D 3 HOH A 10 123 123 HOH HOH . 
D 3 HOH A 11 124 124 HOH HOH . 
D 3 HOH A 12 129 129 HOH HOH . 
D 3 HOH A 13 130 130 HOH HOH . 
D 3 HOH A 14 131 131 HOH HOH . 
D 3 HOH A 15 133 133 HOH HOH . 
D 3 HOH A 16 134 134 HOH HOH . 
D 3 HOH A 17 135 135 HOH HOH . 
D 3 HOH A 18 137 137 HOH HOH . 
D 3 HOH A 19 140 140 HOH HOH . 
D 3 HOH A 20 141 141 HOH HOH . 
D 3 HOH A 21 142 142 HOH HOH . 
D 3 HOH A 22 143 143 HOH HOH . 
D 3 HOH A 23 146 146 HOH HOH . 
D 3 HOH A 24 147 147 HOH HOH . 
D 3 HOH A 25 148 148 HOH HOH . 
D 3 HOH A 26 149 149 HOH HOH . 
D 3 HOH A 27 151 151 HOH HOH . 
D 3 HOH A 28 153 153 HOH HOH . 
D 3 HOH A 29 155 155 HOH HOH . 
D 3 HOH A 30 156 156 HOH HOH . 
D 3 HOH A 31 157 157 HOH HOH . 
D 3 HOH A 32 158 158 HOH HOH . 
D 3 HOH A 33 160 160 HOH HOH . 
D 3 HOH A 34 161 161 HOH HOH . 
D 3 HOH A 35 163 163 HOH HOH . 
D 3 HOH A 36 165 165 HOH HOH . 
D 3 HOH A 37 166 166 HOH HOH . 
D 3 HOH A 38 167 167 HOH HOH . 
D 3 HOH A 39 168 168 HOH HOH . 
D 3 HOH A 40 170 170 HOH HOH . 
D 3 HOH A 41 171 171 HOH HOH . 
D 3 HOH A 42 173 173 HOH HOH . 
D 3 HOH A 43 178 178 HOH HOH . 
D 3 HOH A 44 181 181 HOH HOH . 
D 3 HOH A 45 184 184 HOH HOH . 
E 3 HOH B 1 102 102 HOH HOH . 
E 3 HOH B 2 103 103 HOH HOH . 
E 3 HOH B 3 104 104 HOH HOH . 
E 3 HOH B 4 106 106 HOH HOH . 
E 3 HOH B 5 107 107 HOH HOH . 
E 3 HOH B 6 109 109 HOH HOH . 
E 3 HOH B 7 110 110 HOH HOH . 
E 3 HOH B 8 111 111 HOH HOH . 
E 3 HOH B 9 112 112 HOH HOH . 
E 3 HOH B 10 115 115 HOH HOH . 
E 3 HOH B 11 117 117 HOH HOH . 
E 3 HOH B 12 121 121 HOH HOH . 
E 3 HOH B 13 122 122 HOH HOH . 
E 3 HOH B 14 125 125 HOH HOH . 
E 3 HOH B 15 126 126 HOH HOH . 
E 3 HOH B 16 127 127 HOH HOH . 
E 3 HOH B 17 128 128 HOH HOH . 
E 3 HOH B 18 132 132 HOH HOH . 
E 3 HOH B 19 136 136 HOH HOH . 
E 3 HOH B 20 138 138 HOH HOH . 
E 3 HOH B 21 139 139 HOH HOH . 
E 3 HOH B 22 144 144 HOH HOH . 
E 3 HOH B 23 145 145 HOH HOH . 
E 3 HOH B 24 150 150 HOH HOH . 
E 3 HOH B 25 152 152 HOH HOH . 
E 3 HOH B 26 154 154 HOH HOH . 
E 3 HOH B 27 159 159 HOH HOH . 
E 3 HOH B 28 162 162 HOH HOH . 
E 3 HOH B 29 164 164 HOH HOH . 
E 3 HOH B 30 169 169 HOH HOH . 
E 3 HOH B 31 172 172 HOH HOH . 
E 3 HOH B 32 174 174 HOH HOH . 
E 3 HOH B 33 175 175 HOH HOH . 
E 3 HOH B 34 176 176 HOH HOH . 
E 3 HOH B 35 177 177 HOH HOH . 
E 3 HOH B 36 179 179 HOH HOH . 
E 3 HOH B 37 180 180 HOH HOH . 
E 3 HOH B 38 182 182 HOH HOH . 
E 3 HOH B 39 183 183 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . C 2 19.979 11.535 1.753 0.27 13.02 ? S SO4 19 B 1 
HETATM 2 O O1 SO4 . . . C 2 21.064 12.361 1.948 0.27 10.03 ? O1 SO4 19 B 1 
HETATM 3 O O2 SO4 . . . C 2 20.413 10.242 1.512 0.27 10.62 ? O2 SO4 19 B 1 
HETATM 4 O O3 SO4 . . . C 2 19.154 11.535 2.869 0.27 17.41 ? O3 SO4 19 B 1 
HETATM 5 O O4 SO4 . . . C 2 19.227 11.978 0.665 0.27 23.65 ? O4 SO4 19 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#