data_4A41 # _model_server_result.job_id kv7U3iimyJRISXv2Epk7Dw _model_server_result.datetime_utc '2024-11-24 23:36:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4a41 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2494}' # _entry.id 4A41 # _exptl.entry_id 4A41 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.64 _cell.angle_gamma 90 _cell.entry_id 4A41 _cell.length_a 65.271 _cell.length_b 38.322 _cell.length_c 53.875 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4A41 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O PHE 49 A PHE 1381 1_555 B CA CA . A CA 2494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc2 A OD1 ASP 52 A ASP 1384 1_555 B CA CA . A CA 2494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc3 A O LYS 54 A LYS 1386 1_555 B CA CA . A CA 2494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc4 A O THR 57 A THR 1389 1_555 B CA CA . A CA 2494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc5 A OG1 THR 57 A THR 1389 1_555 B CA CA . A CA 2494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc6 A O ALA 155 A ALA 1487 1_555 B CA CA . A CA 2494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc7 A OE2 GLU 156 A GLU 1488 1_555 B CA CA . A CA 2494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc8 F O HOH . A HOH 2138 4_555 E NA NA . A NA 2497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc9 F O HOH . A HOH 2142 4_555 E NA NA . A NA 2497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc10 F O HOH . A HOH 2254 3_455 D NA NA . A NA 2496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.165 ? metalc ? metalc11 F O HOH . A HOH 2265 1_555 D NA NA . A NA 2496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4A41 _atom_sites.fract_transf_matrix[1][1] 0.015321 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000171 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026095 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018563 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 2494 2494 CA CA . C 3 GAL A 1 2495 2495 GAL GAL . D 4 NA A 1 2496 2496 NA NA . E 4 NA A 1 2497 2497 NA NA . F 5 HOH A 1 2001 2001 HOH HOH . F 5 HOH A 2 2002 2002 HOH HOH . F 5 HOH A 3 2003 2003 HOH HOH . F 5 HOH A 4 2004 2004 HOH HOH . F 5 HOH A 5 2005 2005 HOH HOH . F 5 HOH A 6 2006 2006 HOH HOH . F 5 HOH A 7 2007 2007 HOH HOH . F 5 HOH A 8 2008 2008 HOH HOH . F 5 HOH A 9 2009 2009 HOH HOH . F 5 HOH A 10 2010 2010 HOH HOH . F 5 HOH A 11 2011 2011 HOH HOH . F 5 HOH A 12 2012 2012 HOH HOH . F 5 HOH A 13 2013 2013 HOH HOH . F 5 HOH A 14 2014 2014 HOH HOH . F 5 HOH A 15 2015 2015 HOH HOH . F 5 HOH A 16 2016 2016 HOH HOH . F 5 HOH A 17 2017 2017 HOH HOH . F 5 HOH A 18 2018 2018 HOH HOH . F 5 HOH A 19 2019 2019 HOH HOH . F 5 HOH A 20 2020 2020 HOH HOH . F 5 HOH A 21 2021 2021 HOH HOH . F 5 HOH A 22 2022 2022 HOH HOH . F 5 HOH A 23 2023 2023 HOH HOH . F 5 HOH A 24 2024 2024 HOH HOH . F 5 HOH A 25 2025 2025 HOH HOH . F 5 HOH A 26 2026 2026 HOH HOH . F 5 HOH A 27 2027 2027 HOH HOH . F 5 HOH A 28 2028 2028 HOH HOH . F 5 HOH A 29 2029 2029 HOH HOH . F 5 HOH A 30 2030 2030 HOH HOH . F 5 HOH A 31 2031 2031 HOH HOH . F 5 HOH A 32 2032 2032 HOH HOH . F 5 HOH A 33 2033 2033 HOH HOH . F 5 HOH A 34 2034 2034 HOH HOH . F 5 HOH A 35 2035 2035 HOH HOH . F 5 HOH A 36 2036 2036 HOH HOH . F 5 HOH A 37 2037 2037 HOH HOH . F 5 HOH A 38 2038 2038 HOH HOH . F 5 HOH A 39 2039 2039 HOH HOH . F 5 HOH A 40 2040 2040 HOH HOH . F 5 HOH A 41 2041 2041 HOH HOH . F 5 HOH A 42 2042 2042 HOH HOH . F 5 HOH A 43 2043 2043 HOH HOH . F 5 HOH A 44 2044 2044 HOH HOH . F 5 HOH A 45 2045 2045 HOH HOH . F 5 HOH A 46 2046 2046 HOH HOH . F 5 HOH A 47 2047 2047 HOH HOH . F 5 HOH A 48 2048 2048 HOH HOH . F 5 HOH A 49 2049 2049 HOH HOH . F 5 HOH A 50 2050 2050 HOH HOH . F 5 HOH A 51 2051 2051 HOH HOH . F 5 HOH A 52 2052 2052 HOH HOH . F 5 HOH A 53 2053 2053 HOH HOH . F 5 HOH A 54 2054 2054 HOH HOH . F 5 HOH A 55 2055 2055 HOH HOH . F 5 HOH A 56 2056 2056 HOH HOH . F 5 HOH A 57 2057 2057 HOH HOH . F 5 HOH A 58 2058 2058 HOH HOH . F 5 HOH A 59 2060 2060 HOH HOH . F 5 HOH A 60 2061 2061 HOH HOH . F 5 HOH A 61 2062 2062 HOH HOH . F 5 HOH A 62 2063 2063 HOH HOH . F 5 HOH A 63 2064 2064 HOH HOH . F 5 HOH A 64 2065 2065 HOH HOH . F 5 HOH A 65 2066 2066 HOH HOH . F 5 HOH A 66 2067 2067 HOH HOH . F 5 HOH A 67 2068 2068 HOH HOH . F 5 HOH A 68 2069 2069 HOH HOH . F 5 HOH A 69 2070 2070 HOH HOH . F 5 HOH A 70 2071 2071 HOH HOH . F 5 HOH A 71 2072 2072 HOH HOH . F 5 HOH A 72 2073 2073 HOH HOH . F 5 HOH A 73 2074 2074 HOH HOH . F 5 HOH A 74 2075 2075 HOH HOH . F 5 HOH A 75 2076 2076 HOH HOH . F 5 HOH A 76 2077 2077 HOH HOH . F 5 HOH A 77 2078 2078 HOH HOH . F 5 HOH A 78 2079 2079 HOH HOH . F 5 HOH A 79 2080 2080 HOH HOH . F 5 HOH A 80 2081 2081 HOH HOH . F 5 HOH A 81 2082 2082 HOH HOH . F 5 HOH A 82 2084 2084 HOH HOH . F 5 HOH A 83 2085 2085 HOH HOH . F 5 HOH A 84 2086 2086 HOH HOH . F 5 HOH A 85 2087 2087 HOH HOH . F 5 HOH A 86 2088 2088 HOH HOH . F 5 HOH A 87 2089 2089 HOH HOH . F 5 HOH A 88 2090 2090 HOH HOH . F 5 HOH A 89 2091 2091 HOH HOH . F 5 HOH A 90 2092 2092 HOH HOH . F 5 HOH A 91 2093 2093 HOH HOH . F 5 HOH A 92 2094 2094 HOH HOH . F 5 HOH A 93 2095 2095 HOH HOH . F 5 HOH A 94 2096 2096 HOH HOH . F 5 HOH A 95 2097 2097 HOH HOH . F 5 HOH A 96 2098 2098 HOH HOH . F 5 HOH A 97 2099 2099 HOH HOH . F 5 HOH A 98 2101 2101 HOH HOH . F 5 HOH A 99 2102 2102 HOH HOH . F 5 HOH A 100 2103 2103 HOH HOH . F 5 HOH A 101 2104 2104 HOH HOH . F 5 HOH A 102 2105 2105 HOH HOH . F 5 HOH A 103 2106 2106 HOH HOH . F 5 HOH A 104 2107 2107 HOH HOH . F 5 HOH A 105 2108 2108 HOH HOH . F 5 HOH A 106 2109 2109 HOH HOH . F 5 HOH A 107 2110 2110 HOH HOH . F 5 HOH A 108 2111 2111 HOH HOH . F 5 HOH A 109 2112 2112 HOH HOH . F 5 HOH A 110 2113 2113 HOH HOH . F 5 HOH A 111 2114 2114 HOH HOH . F 5 HOH A 112 2115 2115 HOH HOH . F 5 HOH A 113 2116 2116 HOH HOH . F 5 HOH A 114 2117 2117 HOH HOH . F 5 HOH A 115 2118 2118 HOH HOH . F 5 HOH A 116 2119 2119 HOH HOH . F 5 HOH A 117 2120 2120 HOH HOH . F 5 HOH A 118 2121 2121 HOH HOH . F 5 HOH A 119 2122 2122 HOH HOH . F 5 HOH A 120 2123 2123 HOH HOH . F 5 HOH A 121 2124 2124 HOH HOH . F 5 HOH A 122 2125 2125 HOH HOH . F 5 HOH A 123 2126 2126 HOH HOH . F 5 HOH A 124 2127 2127 HOH HOH . F 5 HOH A 125 2128 2128 HOH HOH . F 5 HOH A 126 2129 2129 HOH HOH . F 5 HOH A 127 2130 2130 HOH HOH . F 5 HOH A 128 2131 2131 HOH HOH . F 5 HOH A 129 2132 2132 HOH HOH . F 5 HOH A 130 2133 2133 HOH HOH . F 5 HOH A 131 2134 2134 HOH HOH . F 5 HOH A 132 2135 2135 HOH HOH . F 5 HOH A 133 2136 2136 HOH HOH . F 5 HOH A 134 2137 2137 HOH HOH . F 5 HOH A 135 2138 2138 HOH HOH . F 5 HOH A 136 2139 2139 HOH HOH . F 5 HOH A 137 2140 2140 HOH HOH . F 5 HOH A 138 2141 2141 HOH HOH . F 5 HOH A 139 2142 2142 HOH HOH . F 5 HOH A 140 2143 2143 HOH HOH . F 5 HOH A 141 2144 2144 HOH HOH . F 5 HOH A 142 2146 2146 HOH HOH . F 5 HOH A 143 2147 2147 HOH HOH . F 5 HOH A 144 2148 2148 HOH HOH . F 5 HOH A 145 2149 2149 HOH HOH . F 5 HOH A 146 2150 2150 HOH HOH . F 5 HOH A 147 2152 2152 HOH HOH . F 5 HOH A 148 2154 2154 HOH HOH . F 5 HOH A 149 2155 2155 HOH HOH . F 5 HOH A 150 2156 2156 HOH HOH . F 5 HOH A 151 2157 2157 HOH HOH . F 5 HOH A 152 2158 2158 HOH HOH . F 5 HOH A 153 2159 2159 HOH HOH . F 5 HOH A 154 2160 2160 HOH HOH . F 5 HOH A 155 2161 2161 HOH HOH . F 5 HOH A 156 2162 2162 HOH HOH . F 5 HOH A 157 2163 2163 HOH HOH . F 5 HOH A 158 2164 2164 HOH HOH . F 5 HOH A 159 2165 2165 HOH HOH . F 5 HOH A 160 2166 2166 HOH HOH . F 5 HOH A 161 2167 2167 HOH HOH . F 5 HOH A 162 2168 2168 HOH HOH . F 5 HOH A 163 2169 2169 HOH HOH . F 5 HOH A 164 2170 2170 HOH HOH . F 5 HOH A 165 2171 2171 HOH HOH . F 5 HOH A 166 2172 2172 HOH HOH . F 5 HOH A 167 2173 2173 HOH HOH . F 5 HOH A 168 2174 2174 HOH HOH . F 5 HOH A 169 2175 2175 HOH HOH . F 5 HOH A 170 2176 2176 HOH HOH . F 5 HOH A 171 2177 2177 HOH HOH . F 5 HOH A 172 2178 2178 HOH HOH . F 5 HOH A 173 2179 2179 HOH HOH . F 5 HOH A 174 2180 2180 HOH HOH . F 5 HOH A 175 2182 2182 HOH HOH . F 5 HOH A 176 2183 2183 HOH HOH . F 5 HOH A 177 2184 2184 HOH HOH . F 5 HOH A 178 2185 2185 HOH HOH . F 5 HOH A 179 2186 2186 HOH HOH . F 5 HOH A 180 2187 2187 HOH HOH . F 5 HOH A 181 2188 2188 HOH HOH . F 5 HOH A 182 2189 2189 HOH HOH . F 5 HOH A 183 2190 2190 HOH HOH . F 5 HOH A 184 2191 2191 HOH HOH . F 5 HOH A 185 2192 2192 HOH HOH . F 5 HOH A 186 2193 2193 HOH HOH . F 5 HOH A 187 2194 2194 HOH HOH . F 5 HOH A 188 2195 2195 HOH HOH . F 5 HOH A 189 2196 2196 HOH HOH . F 5 HOH A 190 2197 2197 HOH HOH . F 5 HOH A 191 2198 2198 HOH HOH . F 5 HOH A 192 2199 2199 HOH HOH . F 5 HOH A 193 2200 2200 HOH HOH . F 5 HOH A 194 2201 2201 HOH HOH . F 5 HOH A 195 2202 2202 HOH HOH . F 5 HOH A 196 2203 2203 HOH HOH . F 5 HOH A 197 2204 2204 HOH HOH . F 5 HOH A 198 2205 2205 HOH HOH . F 5 HOH A 199 2206 2206 HOH HOH . F 5 HOH A 200 2207 2207 HOH HOH . F 5 HOH A 201 2208 2208 HOH HOH . F 5 HOH A 202 2209 2209 HOH HOH . F 5 HOH A 203 2210 2210 HOH HOH . F 5 HOH A 204 2211 2211 HOH HOH . F 5 HOH A 205 2212 2212 HOH HOH . F 5 HOH A 206 2213 2213 HOH HOH . F 5 HOH A 207 2214 2214 HOH HOH . F 5 HOH A 208 2215 2215 HOH HOH . F 5 HOH A 209 2216 2216 HOH HOH . F 5 HOH A 210 2217 2217 HOH HOH . F 5 HOH A 211 2218 2218 HOH HOH . F 5 HOH A 212 2219 2219 HOH HOH . F 5 HOH A 213 2220 2220 HOH HOH . F 5 HOH A 214 2221 2221 HOH HOH . F 5 HOH A 215 2222 2222 HOH HOH . F 5 HOH A 216 2223 2223 HOH HOH . F 5 HOH A 217 2224 2224 HOH HOH . F 5 HOH A 218 2225 2225 HOH HOH . F 5 HOH A 219 2226 2226 HOH HOH . F 5 HOH A 220 2227 2227 HOH HOH . F 5 HOH A 221 2228 2228 HOH HOH . F 5 HOH A 222 2229 2229 HOH HOH . F 5 HOH A 223 2230 2230 HOH HOH . F 5 HOH A 224 2231 2231 HOH HOH . F 5 HOH A 225 2232 2232 HOH HOH . F 5 HOH A 226 2233 2233 HOH HOH . F 5 HOH A 227 2234 2234 HOH HOH . F 5 HOH A 228 2235 2235 HOH HOH . F 5 HOH A 229 2236 2236 HOH HOH . F 5 HOH A 230 2237 2237 HOH HOH . F 5 HOH A 231 2238 2238 HOH HOH . F 5 HOH A 232 2239 2239 HOH HOH . F 5 HOH A 233 2240 2240 HOH HOH . F 5 HOH A 234 2241 2241 HOH HOH . F 5 HOH A 235 2242 2242 HOH HOH . F 5 HOH A 236 2243 2243 HOH HOH . F 5 HOH A 237 2244 2244 HOH HOH . F 5 HOH A 238 2245 2245 HOH HOH . F 5 HOH A 239 2246 2246 HOH HOH . F 5 HOH A 240 2247 2247 HOH HOH . F 5 HOH A 241 2248 2248 HOH HOH . F 5 HOH A 242 2249 2249 HOH HOH . F 5 HOH A 243 2250 2250 HOH HOH . F 5 HOH A 244 2251 2251 HOH HOH . F 5 HOH A 245 2252 2252 HOH HOH . F 5 HOH A 246 2253 2253 HOH HOH . F 5 HOH A 247 2254 2254 HOH HOH . F 5 HOH A 248 2255 2255 HOH HOH . F 5 HOH A 249 2256 2256 HOH HOH . F 5 HOH A 250 2257 2257 HOH HOH . F 5 HOH A 251 2258 2258 HOH HOH . F 5 HOH A 252 2259 2259 HOH HOH . F 5 HOH A 253 2261 2261 HOH HOH . F 5 HOH A 254 2262 2262 HOH HOH . F 5 HOH A 255 2263 2263 HOH HOH . F 5 HOH A 256 2265 2265 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 21.543 _atom_site.Cartn_y 41.101 _atom_site.Cartn_z 23.568 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 10.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 2494 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 212 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #