data_4A46 # _model_server_result.job_id wHy7fC2uIFvPtqFdOBc62Q _model_server_result.datetime_utc '2024-11-12 20:51:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4a46 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1065}' # _entry.id 4A46 # _exptl.entry_id 4A46 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 83.34 _cell.angle_beta 89.52 _cell.angle_gamma 75.28 _cell.entry_id 4A46 _cell.length_a 30.71 _cell.length_b 41.99 _cell.length_c 45.24 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4A46 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 11 A CYS 12 1_555 E ZN ZN . A ZN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc2 A SG CYS 14 A CYS 15 1_555 E ZN ZN . A ZN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc3 E ZN ZN . A ZN 65 1_555 B SG CYS 11 B CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc4 E ZN ZN . A ZN 65 1_555 B SG CYS 14 B CYS 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc5 F NA NA . A NA 1065 1_555 K O HOH . A HOH 2016 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc6 K O HOH . A HOH 2025 1_555 I NA NA . C NA 1066 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc7 C SG CYS 11 C CYS 12 1_555 G ZN ZN . C ZN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc8 C SG CYS 14 C CYS 15 1_555 G ZN ZN . C ZN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc9 G ZN ZN . C ZN 65 1_555 D SG CYS 11 D CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc10 G ZN ZN . C ZN 65 1_555 D SG CYS 14 D CYS 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc11 I NA NA . C NA 1066 1_555 M O HOH . C HOH 2027 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc12 I NA NA . C NA 1066 1_555 M O HOH . C HOH 2038 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc13 I NA NA . C NA 1066 1_555 M O HOH . C HOH 2039 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4A46 _atom_sites.fract_transf_matrix[1][1] 0.032563 _atom_sites.fract_transf_matrix[1][2] -0.008555 _atom_sites.fract_transf_matrix[1][3] 0.000739 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024623 _atom_sites.fract_transf_matrix[2][3] -0.002919 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02226 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 65 65 ZN ZN . F 3 NA A 1 1065 1065 NA NA . G 2 ZN C 1 65 65 ZN ZN . H 4 CL C 1 1065 1065 CL CL . I 3 NA C 1 1066 1066 NA NA . J 4 CL D 1 1065 1065 CL CL . K 5 HOH A 1 2001 2001 HOH HOH . K 5 HOH A 2 2002 2002 HOH HOH . K 5 HOH A 3 2003 2003 HOH HOH . K 5 HOH A 4 2004 2004 HOH HOH . K 5 HOH A 5 2005 2005 HOH HOH . K 5 HOH A 6 2006 2006 HOH HOH . K 5 HOH A 7 2007 2007 HOH HOH . K 5 HOH A 8 2008 2008 HOH HOH . K 5 HOH A 9 2009 2009 HOH HOH . K 5 HOH A 10 2010 2010 HOH HOH . K 5 HOH A 11 2011 2011 HOH HOH . K 5 HOH A 12 2012 2012 HOH HOH . K 5 HOH A 13 2013 2013 HOH HOH . K 5 HOH A 14 2014 2014 HOH HOH . K 5 HOH A 15 2015 2015 HOH HOH . K 5 HOH A 16 2016 2016 HOH HOH . K 5 HOH A 17 2017 2017 HOH HOH . K 5 HOH A 18 2018 2018 HOH HOH . K 5 HOH A 19 2019 2019 HOH HOH . K 5 HOH A 20 2020 2020 HOH HOH . K 5 HOH A 21 2021 2021 HOH HOH . K 5 HOH A 22 2022 2022 HOH HOH . K 5 HOH A 23 2023 2023 HOH HOH . K 5 HOH A 24 2024 2024 HOH HOH . K 5 HOH A 25 2025 2025 HOH HOH . K 5 HOH A 26 2026 2026 HOH HOH . K 5 HOH A 27 2027 2027 HOH HOH . K 5 HOH A 28 2028 2028 HOH HOH . K 5 HOH A 29 2029 2029 HOH HOH . K 5 HOH A 30 2030 2030 HOH HOH . K 5 HOH A 31 2031 2031 HOH HOH . K 5 HOH A 32 2032 2032 HOH HOH . K 5 HOH A 33 2033 2033 HOH HOH . K 5 HOH A 34 2034 2034 HOH HOH . K 5 HOH A 35 2035 2035 HOH HOH . K 5 HOH A 36 2036 2036 HOH HOH . K 5 HOH A 37 2037 2037 HOH HOH . K 5 HOH A 38 2038 2038 HOH HOH . K 5 HOH A 39 2039 2039 HOH HOH . K 5 HOH A 40 2040 2040 HOH HOH . K 5 HOH A 41 2041 2041 HOH HOH . K 5 HOH A 42 2042 2042 HOH HOH . K 5 HOH A 43 2043 2043 HOH HOH . K 5 HOH A 44 2044 2044 HOH HOH . K 5 HOH A 45 2045 2045 HOH HOH . L 5 HOH B 1 2001 2001 HOH HOH . L 5 HOH B 2 2002 2002 HOH HOH . L 5 HOH B 3 2003 2003 HOH HOH . L 5 HOH B 4 2004 2004 HOH HOH . L 5 HOH B 5 2005 2005 HOH HOH . L 5 HOH B 6 2006 2006 HOH HOH . L 5 HOH B 7 2007 2007 HOH HOH . L 5 HOH B 8 2008 2008 HOH HOH . L 5 HOH B 9 2009 2009 HOH HOH . L 5 HOH B 10 2010 2010 HOH HOH . L 5 HOH B 11 2011 2011 HOH HOH . L 5 HOH B 12 2012 2012 HOH HOH . L 5 HOH B 13 2013 2013 HOH HOH . L 5 HOH B 14 2014 2014 HOH HOH . L 5 HOH B 15 2015 2015 HOH HOH . L 5 HOH B 16 2016 2016 HOH HOH . L 5 HOH B 17 2017 2017 HOH HOH . L 5 HOH B 18 2018 2018 HOH HOH . L 5 HOH B 19 2019 2019 HOH HOH . L 5 HOH B 20 2020 2020 HOH HOH . L 5 HOH B 21 2021 2021 HOH HOH . L 5 HOH B 22 2022 2022 HOH HOH . L 5 HOH B 23 2023 2023 HOH HOH . L 5 HOH B 24 2024 2024 HOH HOH . L 5 HOH B 25 2025 2025 HOH HOH . L 5 HOH B 26 2026 2026 HOH HOH . M 5 HOH C 1 2001 2001 HOH HOH . M 5 HOH C 2 2002 2002 HOH HOH . M 5 HOH C 3 2003 2003 HOH HOH . M 5 HOH C 4 2004 2004 HOH HOH . M 5 HOH C 5 2005 2005 HOH HOH . M 5 HOH C 6 2006 2006 HOH HOH . M 5 HOH C 7 2007 2007 HOH HOH . M 5 HOH C 8 2008 2008 HOH HOH . M 5 HOH C 9 2009 2009 HOH HOH . M 5 HOH C 10 2010 2010 HOH HOH . M 5 HOH C 11 2011 2011 HOH HOH . M 5 HOH C 12 2012 2012 HOH HOH . M 5 HOH C 13 2013 2013 HOH HOH . M 5 HOH C 14 2014 2014 HOH HOH . M 5 HOH C 15 2015 2015 HOH HOH . M 5 HOH C 16 2016 2016 HOH HOH . M 5 HOH C 17 2017 2017 HOH HOH . M 5 HOH C 18 2018 2018 HOH HOH . M 5 HOH C 19 2019 2019 HOH HOH . M 5 HOH C 20 2020 2020 HOH HOH . M 5 HOH C 21 2021 2021 HOH HOH . M 5 HOH C 22 2022 2022 HOH HOH . M 5 HOH C 23 2023 2023 HOH HOH . M 5 HOH C 24 2024 2024 HOH HOH . M 5 HOH C 25 2025 2025 HOH HOH . M 5 HOH C 26 2026 2026 HOH HOH . M 5 HOH C 27 2027 2027 HOH HOH . M 5 HOH C 28 2028 2028 HOH HOH . M 5 HOH C 29 2029 2029 HOH HOH . M 5 HOH C 30 2030 2030 HOH HOH . M 5 HOH C 31 2031 2031 HOH HOH . M 5 HOH C 32 2032 2032 HOH HOH . M 5 HOH C 33 2033 2033 HOH HOH . M 5 HOH C 34 2034 2034 HOH HOH . M 5 HOH C 35 2035 2035 HOH HOH . M 5 HOH C 36 2036 2036 HOH HOH . M 5 HOH C 37 2037 2037 HOH HOH . M 5 HOH C 38 2038 2038 HOH HOH . M 5 HOH C 39 2039 2039 HOH HOH . M 5 HOH C 40 2040 2040 HOH HOH . N 5 HOH D 1 2001 2001 HOH HOH . N 5 HOH D 2 2002 2002 HOH HOH . N 5 HOH D 3 2003 2003 HOH HOH . N 5 HOH D 4 2004 2004 HOH HOH . N 5 HOH D 5 2005 2005 HOH HOH . N 5 HOH D 6 2006 2006 HOH HOH . N 5 HOH D 7 2007 2007 HOH HOH . N 5 HOH D 8 2008 2008 HOH HOH . N 5 HOH D 9 2009 2009 HOH HOH . N 5 HOH D 10 2010 2010 HOH HOH . N 5 HOH D 11 2011 2011 HOH HOH . N 5 HOH D 12 2012 2012 HOH HOH . N 5 HOH D 13 2013 2013 HOH HOH . N 5 HOH D 14 2014 2014 HOH HOH . N 5 HOH D 15 2015 2015 HOH HOH . N 5 HOH D 16 2016 2016 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -5.775 _atom_site.Cartn_y 8.46 _atom_site.Cartn_z 11.814 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.37 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 1065 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 404 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #