data_4A50
#
_model_server_result.job_id            J96Mb3NK9oY2ubeFOvdHiw 
_model_server_result.datetime_utc      '2024-10-13 14:21:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4a50 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1367}' 
#
_entry.id    4A50 
#
_exptl.entry_id    4A50 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              359.461 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2-AMINO-5-(3-METHYLPHENYL)-5,5-DIPHENYLPROPANOIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4A50 
_cell.length_a            158.54 
_cell.length_b            158.54 
_cell.length_c            158.54 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4A50 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        199 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 21 3' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 112 A THR 112 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? 
metalc ? metalc2 B O3B ADP . A ADP 600 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc3 C MG MG . A MG 601 1_555 F O HOH . A HOH 2011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.893 ? 
metalc ? metalc4 C MG MG . A MG 601 1_555 F O HOH . A HOH 2012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc5 C MG MG . A MG 601 1_555 F O HOH . A HOH 2013 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc6 C MG MG . A MG 601 1_555 F O HOH . A HOH 2024 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? 
#
_chem_comp.formula           'C24 H25 N O2' 
_chem_comp.formula_weight    359.461 
_chem_comp.id                DQ6 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2-AMINO-5-(3-METHYLPHENYL)-5,5-DIPHENYLPROPANOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CAV DQ6 sing 127 n n 
CAV CAR DQ6 sing 128 n y 
CAV CAL DQ6 doub 129 n y 
CAR CAY DQ6 doub 130 n y 
CAL CAK DQ6 sing 131 n y 
CAK CAQ DQ6 doub 132 n y 
CAQ CAY DQ6 sing 133 n y 
CAY CBA DQ6 sing 134 n n 
CBA CAX DQ6 sing 135 n n 
CBA CAT DQ6 sing 136 n n 
CBA CAW DQ6 sing 137 n n 
CAX CAO DQ6 sing 138 n y 
CAX CAP DQ6 doub 139 n y 
CAO CAI DQ6 doub 140 n y 
CAI CAF DQ6 sing 141 n y 
CAF CAJ DQ6 doub 142 n y 
CAJ CAP DQ6 sing 143 n y 
CAT CB DQ6 sing 144 n n 
CB CA DQ6 sing 145 n n 
CA C DQ6 sing 146 n n 
CA N DQ6 sing 147 n n 
C OXT DQ6 sing 148 n n 
C O DQ6 doub 149 n n 
CAW CAM DQ6 sing 150 n y 
CAW CAN DQ6 doub 151 n y 
CAM CAG DQ6 doub 152 n y 
CAG CAE DQ6 sing 153 n y 
CAE CAH DQ6 doub 154 n y 
CAH CAN DQ6 sing 155 n y 
CAA HAA1 DQ6 sing 156 n n 
CAA HAA2 DQ6 sing 157 n n 
CAA HAA3 DQ6 sing 158 n n 
CAR HAR DQ6 sing 159 n n 
CAL HAL DQ6 sing 160 n n 
CAK HAK DQ6 sing 161 n n 
CAQ HAQ DQ6 sing 162 n n 
CAT HAT1 DQ6 sing 163 n n 
CAT HAT2 DQ6 sing 164 n n 
CAO HAO DQ6 sing 165 n n 
CAP HAP DQ6 sing 166 n n 
CAI HAI DQ6 sing 167 n n 
CAF HAF DQ6 sing 168 n n 
CAJ HAJ DQ6 sing 169 n n 
CB HB1C DQ6 sing 170 n n 
CB HB2C DQ6 sing 171 n n 
CA HA DQ6 sing 172 n n 
N HN1 DQ6 sing 173 n n 
N HN2 DQ6 sing 174 n n 
OXT HXT DQ6 sing 175 n n 
CAM HAM DQ6 sing 176 n n 
CAN HAN DQ6 sing 177 n n 
CAG HAG DQ6 sing 178 n n 
CAE HAE DQ6 sing 179 n n 
CAH HAH DQ6 sing 180 n n 
#
_atom_sites.entry_id                     4A50 
_atom_sites.fract_transf_matrix[1][1]    0.006308 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006308 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006308 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ADP A 1 600 600 ADP ADP . 
C 3 MG A 1 601 601 MG MG . 
D 4 DQ6 A 1 1367 1367 DQ6 DQ6 . 
E 5 DQ7 A 1 1368 1368 DQ7 DQ7 . 
F 6 HOH A 1 2001 2001 HOH HOH . 
F 6 HOH A 2 2002 2002 HOH HOH . 
F 6 HOH A 3 2003 2003 HOH HOH . 
F 6 HOH A 4 2004 2004 HOH HOH . 
F 6 HOH A 5 2005 2005 HOH HOH . 
F 6 HOH A 6 2006 2006 HOH HOH . 
F 6 HOH A 7 2007 2007 HOH HOH . 
F 6 HOH A 8 2008 2008 HOH HOH . 
F 6 HOH A 9 2009 2009 HOH HOH . 
F 6 HOH A 10 2010 2010 HOH HOH . 
F 6 HOH A 11 2011 2011 HOH HOH . 
F 6 HOH A 12 2012 2012 HOH HOH . 
F 6 HOH A 13 2013 2013 HOH HOH . 
F 6 HOH A 14 2014 2014 HOH HOH . 
F 6 HOH A 15 2015 2015 HOH HOH . 
F 6 HOH A 16 2016 2016 HOH HOH . 
F 6 HOH A 17 2017 2017 HOH HOH . 
F 6 HOH A 18 2018 2018 HOH HOH . 
F 6 HOH A 19 2019 2019 HOH HOH . 
F 6 HOH A 20 2020 2020 HOH HOH . 
F 6 HOH A 21 2021 2021 HOH HOH . 
F 6 HOH A 22 2022 2022 HOH HOH . 
F 6 HOH A 23 2023 2023 HOH HOH . 
F 6 HOH A 24 2024 2024 HOH HOH . 
F 6 HOH A 25 2025 2025 HOH HOH . 
F 6 HOH A 26 2026 2026 HOH HOH . 
F 6 HOH A 27 2027 2027 HOH HOH . 
F 6 HOH A 28 2028 2028 HOH HOH . 
F 6 HOH A 29 2029 2029 HOH HOH . 
F 6 HOH A 30 2030 2030 HOH HOH . 
F 6 HOH A 31 2031 2031 HOH HOH . 
F 6 HOH A 32 2032 2032 HOH HOH . 
F 6 HOH A 33 2033 2033 HOH HOH . 
F 6 HOH A 34 2034 2034 HOH HOH . 
F 6 HOH A 35 2035 2035 HOH HOH . 
F 6 HOH A 36 2036 2036 HOH HOH . 
F 6 HOH A 37 2037 2037 HOH HOH . 
F 6 HOH A 38 2038 2038 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA DQ6 . A . D 4 17.002 6.449 -21.42 0.55 48.24 ? CAA DQ6 1367 A 1 
HETATM 2 C CAV DQ6 . A . D 4 16.053 7.301 -22.255 0.55 49.25 ? CAV DQ6 1367 A 1 
HETATM 3 C CAR DQ6 . A . D 4 14.867 6.742 -22.728 0.55 49.98 ? CAR DQ6 1367 A 1 
HETATM 4 C CAL DQ6 . A . D 4 16.384 8.629 -22.526 0.55 47.68 ? CAL DQ6 1367 A 1 
HETATM 5 C CAK DQ6 . A . D 4 15.514 9.403 -23.29 0.55 49.97 ? CAK DQ6 1367 A 1 
HETATM 6 C CAQ DQ6 . A . D 4 14.319 8.848 -23.755 0.55 51.3 ? CAQ DQ6 1367 A 1 
HETATM 7 C CAY DQ6 . A . D 4 13.999 7.507 -23.503 0.55 53.53 ? CAY DQ6 1367 A 1 
HETATM 8 C CBA DQ6 . A . D 4 12.66 6.934 -24.031 0.55 57.17 ? CBA DQ6 1367 A 1 
HETATM 9 C CAX DQ6 . A . D 4 12.617 5.45 -24.431 0.55 58.59 ? CAX DQ6 1367 A 1 
HETATM 10 C CAO DQ6 . A . D 4 11.416 4.747 -24.313 0.55 59.99 ? CAO DQ6 1367 A 1 
HETATM 11 C CAI DQ6 . A . D 4 11.321 3.41 -24.699 0.55 61.33 ? CAI DQ6 1367 A 1 
HETATM 12 C CAF DQ6 . A . D 4 12.438 2.772 -25.232 0.55 60.6 ? CAF DQ6 1367 A 1 
HETATM 13 C CAJ DQ6 . A . D 4 13.634 3.476 -25.37 0.55 60.3 ? CAJ DQ6 1367 A 1 
HETATM 14 C CAP DQ6 . A . D 4 13.72 4.816 -24.99 0.55 59.59 ? CAP DQ6 1367 A 1 
HETATM 15 C CAT DQ6 . A . D 4 11.614 7.209 -22.945 0.55 58.74 ? CAT DQ6 1367 A 1 
HETATM 16 C CB DQ6 . A . D 4 12.132 6.785 -21.575 0.55 60.02 ? CB DQ6 1367 A 1 
HETATM 17 C CA DQ6 . A . D 4 11.05 6.925 -20.515 0.55 60.3 ? CA DQ6 1367 A 1 
HETATM 18 C C DQ6 . A . D 4 11.559 6.296 -19.184 0.55 61.15 ? C DQ6 1367 A 1 
HETATM 19 O OXT DQ6 . A . D 4 11.6 5.032 -19.096 0.55 60.83 ? OXT DQ6 1367 A 1 
HETATM 20 O O DQ6 . A . D 4 11.942 7.097 -18.292 0.55 61.23 ? O DQ6 1367 A 1 
HETATM 21 N N DQ6 . A . D 4 10.763 8.367 -20.411 0.55 60.09 ? N DQ6 1367 A 1 
HETATM 22 C CAW DQ6 . A . D 4 12.223 7.639 -25.313 0.55 57.24 ? CAW DQ6 1367 A 1 
HETATM 23 C CAM DQ6 . A . D 4 13.094 7.7 -26.398 0.55 56.67 ? CAM DQ6 1367 A 1 
HETATM 24 C CAG DQ6 . A . D 4 12.716 8.356 -27.566 0.55 56.39 ? CAG DQ6 1367 A 1 
HETATM 25 C CAE DQ6 . A . D 4 11.447 8.916 -27.65 0.55 57.75 ? CAE DQ6 1367 A 1 
HETATM 26 C CAH DQ6 . A . D 4 10.564 8.83 -26.574 0.55 58.18 ? CAH DQ6 1367 A 1 
HETATM 27 C CAN DQ6 . A . D 4 10.945 8.184 -25.401 0.55 57.16 ? CAN DQ6 1367 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#