data_4A50
#
_model_server_result.job_id            8x3mJNisrw4GnThsMc96DA 
_model_server_result.datetime_utc      '2024-10-13 14:24:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4a50 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1368}' 
#
_entry.id    4A50 
#
_exptl.entry_id    4A50 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              359.461 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2-AMINO-5-(3-METHYLPHENYL)-5,5-DIPHENYLPROPANOIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4A50 
_cell.length_a            158.54 
_cell.length_b            158.54 
_cell.length_c            158.54 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4A50 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        199 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 21 3' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 112 A THR 112 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? 
metalc ? metalc2 B O3B ADP . A ADP 600 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc3 C MG MG . A MG 601 1_555 F O HOH . A HOH 2011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.893 ? 
metalc ? metalc4 C MG MG . A MG 601 1_555 F O HOH . A HOH 2012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc5 C MG MG . A MG 601 1_555 F O HOH . A HOH 2013 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc6 C MG MG . A MG 601 1_555 F O HOH . A HOH 2024 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? 
#
_chem_comp.formula           'C24 H25 N O2' 
_chem_comp.formula_weight    359.461 
_chem_comp.id                DQ7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2-AMINO-5-(3-METHYLPHENYL)-5,5-DIPHENYLPROPANOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA DQ7 sing 181 n n 
CA CB DQ7 sing 182 n n 
CA C DQ7 sing 183 n n 
CB CAT DQ7 sing 184 n n 
C OXT DQ7 sing 185 n n 
C O DQ7 doub 186 n n 
CAM CAG DQ7 doub 187 n y 
CAM CAV DQ7 sing 188 n y 
CAG CAD DQ7 sing 189 n y 
CAD CAH DQ7 doub 190 n y 
CAH CAN DQ7 sing 191 n y 
CAH CAA DQ7 sing 192 n n 
CAN CAV DQ7 doub 193 n y 
CAV CAZ DQ7 sing 194 n n 
CAF CAL DQ7 sing 195 n y 
CAF CAK DQ7 doub 196 n y 
CAL CAR DQ7 doub 197 n y 
CAR CAX DQ7 sing 198 n y 
CAX CAQ DQ7 doub 199 n y 
CAQ CAK DQ7 sing 200 n y 
CAK CAZ DQ7 sing 201 n n 
CAE CAJ DQ7 doub 202 n y 
CAE CAI DQ7 sing 203 n y 
CAJ CAP DQ7 sing 204 n y 
CAP CAW DQ7 doub 205 n y 
CAW CAO DQ7 sing 206 n y 
CAO CAI DQ7 doub 207 n y 
CAI CAZ DQ7 sing 208 n n 
CAZ CAT DQ7 sing 209 n n 
N HN1 DQ7 sing 210 n n 
N HN2 DQ7 sing 211 n n 
CA HA DQ7 sing 212 n n 
CB HB1C DQ7 sing 213 n n 
CB HB2C DQ7 sing 214 n n 
CAT HAT1 DQ7 sing 215 n n 
CAT HAT2 DQ7 sing 216 n n 
OXT HXT DQ7 sing 217 n n 
CAM HAM DQ7 sing 218 n n 
CAG HAG DQ7 sing 219 n n 
CAD HAD DQ7 sing 220 n n 
CAN HAN DQ7 sing 221 n n 
CAA HAA1 DQ7 sing 222 n n 
CAA HAA2 DQ7 sing 223 n n 
CAA HAA3 DQ7 sing 224 n n 
CAF HAF DQ7 sing 225 n n 
CAL HAL DQ7 sing 226 n n 
CAR HAR DQ7 sing 227 n n 
CAX HAX DQ7 sing 228 n n 
CAQ HAQ DQ7 sing 229 n n 
CAE HAE DQ7 sing 230 n n 
CAJ HAJ DQ7 sing 231 n n 
CAP HAP DQ7 sing 232 n n 
CAW HAW DQ7 sing 233 n n 
CAO HAO DQ7 sing 234 n n 
#
_atom_sites.entry_id                     4A50 
_atom_sites.fract_transf_matrix[1][1]    0.006308 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006308 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006308 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ADP A 1 600 600 ADP ADP . 
C 3 MG A 1 601 601 MG MG . 
D 4 DQ6 A 1 1367 1367 DQ6 DQ6 . 
E 5 DQ7 A 1 1368 1368 DQ7 DQ7 . 
F 6 HOH A 1 2001 2001 HOH HOH . 
F 6 HOH A 2 2002 2002 HOH HOH . 
F 6 HOH A 3 2003 2003 HOH HOH . 
F 6 HOH A 4 2004 2004 HOH HOH . 
F 6 HOH A 5 2005 2005 HOH HOH . 
F 6 HOH A 6 2006 2006 HOH HOH . 
F 6 HOH A 7 2007 2007 HOH HOH . 
F 6 HOH A 8 2008 2008 HOH HOH . 
F 6 HOH A 9 2009 2009 HOH HOH . 
F 6 HOH A 10 2010 2010 HOH HOH . 
F 6 HOH A 11 2011 2011 HOH HOH . 
F 6 HOH A 12 2012 2012 HOH HOH . 
F 6 HOH A 13 2013 2013 HOH HOH . 
F 6 HOH A 14 2014 2014 HOH HOH . 
F 6 HOH A 15 2015 2015 HOH HOH . 
F 6 HOH A 16 2016 2016 HOH HOH . 
F 6 HOH A 17 2017 2017 HOH HOH . 
F 6 HOH A 18 2018 2018 HOH HOH . 
F 6 HOH A 19 2019 2019 HOH HOH . 
F 6 HOH A 20 2020 2020 HOH HOH . 
F 6 HOH A 21 2021 2021 HOH HOH . 
F 6 HOH A 22 2022 2022 HOH HOH . 
F 6 HOH A 23 2023 2023 HOH HOH . 
F 6 HOH A 24 2024 2024 HOH HOH . 
F 6 HOH A 25 2025 2025 HOH HOH . 
F 6 HOH A 26 2026 2026 HOH HOH . 
F 6 HOH A 27 2027 2027 HOH HOH . 
F 6 HOH A 28 2028 2028 HOH HOH . 
F 6 HOH A 29 2029 2029 HOH HOH . 
F 6 HOH A 30 2030 2030 HOH HOH . 
F 6 HOH A 31 2031 2031 HOH HOH . 
F 6 HOH A 32 2032 2032 HOH HOH . 
F 6 HOH A 33 2033 2033 HOH HOH . 
F 6 HOH A 34 2034 2034 HOH HOH . 
F 6 HOH A 35 2035 2035 HOH HOH . 
F 6 HOH A 36 2036 2036 HOH HOH . 
F 6 HOH A 37 2037 2037 HOH HOH . 
F 6 HOH A 38 2038 2038 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N DQ7 . B . E 5 9.575 5.748 -21.195 0.45 66.92 ? N DQ7 1368 A 1 
HETATM 2 C CA DQ7 . B . E 5 10.235 7.066 -21.192 0.45 67.23 ? CA DQ7 1368 A 1 
HETATM 3 C CB DQ7 . B . E 5 11.591 6.973 -21.884 0.45 66.69 ? CB DQ7 1368 A 1 
HETATM 4 C C DQ7 . B . E 5 10.469 7.483 -19.75 0.45 68.09 ? C DQ7 1368 A 1 
HETATM 5 O OXT DQ7 . B . E 5 10.646 6.557 -18.916 0.45 69.03 ? OXT DQ7 1368 A 1 
HETATM 6 O O DQ7 . B . E 5 10.454 8.713 -19.518 0.45 68.79 ? O DQ7 1368 A 1 
HETATM 7 C CAO DQ7 . B . E 5 13.333 7.71 -26.516 0.45 60.39 ? CAO DQ7 1368 A 1 
HETATM 8 C CAW DQ7 . B . E 5 13.092 8.335 -27.733 0.45 59.69 ? CAW DQ7 1368 A 1 
HETATM 9 C CAP DQ7 . B . E 5 11.877 8.967 -27.962 0.45 60.13 ? CAP DQ7 1368 A 1 
HETATM 10 C CAJ DQ7 . B . E 5 10.899 8.982 -26.972 0.45 61.58 ? CAJ DQ7 1368 A 1 
HETATM 11 C CAE DQ7 . B . E 5 11.135 8.363 -25.751 0.45 61.35 ? CAE DQ7 1368 A 1 
HETATM 12 C CAI DQ7 . B . E 5 12.358 7.744 -25.531 0.45 61.27 ? CAI DQ7 1368 A 1 
HETATM 13 C CAF DQ7 . B . E 5 13.656 4.949 -25.05 0.45 63.37 ? CAF DQ7 1368 A 1 
HETATM 14 C CAL DQ7 . B . E 5 13.582 3.587 -25.335 0.45 64.09 ? CAL DQ7 1368 A 1 
HETATM 15 C CAR DQ7 . B . E 5 12.41 2.877 -25.085 0.45 64.61 ? CAR DQ7 1368 A 1 
HETATM 16 C CAX DQ7 . B . E 5 11.308 3.527 -24.539 0.45 65 ? CAX DQ7 1368 A 1 
HETATM 17 C CAQ DQ7 . B . E 5 11.386 4.887 -24.246 0.45 63.74 ? CAQ DQ7 1368 A 1 
HETATM 18 C CAK DQ7 . B . E 5 12.562 5.588 -24.483 0.45 62.73 ? CAK DQ7 1368 A 1 
HETATM 19 C CAN DQ7 . B . E 5 14.717 6.771 -22.789 0.45 54.95 ? CAN DQ7 1368 A 1 
HETATM 20 C CAH DQ7 . B . E 5 15.894 7.281 -22.241 0.45 54.04 ? CAH DQ7 1368 A 1 
HETATM 21 C CAD DQ7 . B . E 5 16.271 8.609 -22.45 0.45 53 ? CAD DQ7 1368 A 1 
HETATM 22 C CAG DQ7 . B . E 5 15.464 9.437 -23.223 0.45 54.77 ? CAG DQ7 1368 A 1 
HETATM 23 C CAM DQ7 . B . E 5 14.283 8.932 -23.77 0.45 56 ? CAM DQ7 1368 A 1 
HETATM 24 C CAV DQ7 . B . E 5 13.916 7.598 -23.566 0.45 58.19 ? CAV DQ7 1368 A 1 
HETATM 25 C CAA DQ7 . B . E 5 16.782 6.378 -21.39 0.45 53.01 ? CAA DQ7 1368 A 1 
HETATM 26 C CAT DQ7 . B . E 5 11.438 7.499 -23.304 0.45 64.43 ? CAT DQ7 1368 A 1 
HETATM 27 C CAZ DQ7 . B . E 5 12.607 7.086 -24.192 0.45 61.57 ? CAZ DQ7 1368 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#