data_4A97 # _model_server_result.job_id -xzH3yGZ7WgLqtWw4eAFgA _model_server_result.datetime_utc '2024-11-28 14:27:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4a97 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":1318}' # _entry.id 4A97 # _exptl.entry_id 4A97 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 388.808 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(5R)-6-(5-chloropyridin-2-yl)-7-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyrazin-5-yl 4-methylpiperazine-1-carboxylate' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.2 _cell.angle_gamma 90 _cell.entry_id 4A97 _cell.length_a 105.4 _cell.length_b 266.83 _cell.length_c 110.76 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4A97 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA pentameric 5 software_defined_assembly 1 PISA pentameric 5 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,K,L,M,N,O 1 1 F,G,H,I,J,P,Q,R,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N # _chem_comp.formula 'C17 H17 Cl N6 O3' _chem_comp.formula_weight 388.808 _chem_comp.id ZPC _chem_comp.mon_nstd_flag . _chem_comp.name '(5R)-6-(5-chloropyridin-2-yl)-7-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyrazin-5-yl 4-methylpiperazine-1-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms R-ZOPICLONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 N02 ZPC sing 374 n n N02 C03 ZPC sing 375 n n N02 C07 ZPC sing 376 n n C03 C04 ZPC sing 377 n n C04 N05 ZPC sing 378 n n N05 C06 ZPC sing 379 n n N05 C08 ZPC sing 380 n n C06 C07 ZPC sing 381 n n C08 O09 ZPC doub 382 n n C08 O10 ZPC sing 383 n n O10 C11 ZPC sing 384 n n C11 N12 ZPC sing 385 n n C11 C20 ZPC sing 386 n n N12 C13 ZPC sing 387 n n N12 C21 ZPC sing 388 n n C13 O14 ZPC doub 389 n n C13 C15 ZPC sing 390 n n C15 N16 ZPC doub 391 n y C15 C20 ZPC sing 392 n y N16 C17 ZPC sing 393 n y C17 C18 ZPC doub 394 n y C18 N19 ZPC sing 395 n y N19 C20 ZPC doub 396 n y C21 N22 ZPC doub 397 n y C21 C27 ZPC sing 398 n y N22 C23 ZPC sing 399 n y C23 C24 ZPC doub 400 n y C24 CL ZPC sing 401 n n C24 C26 ZPC sing 402 n y C26 C27 ZPC doub 403 n y C01 H01 ZPC sing 404 n n C01 H01A ZPC sing 405 n n C01 H01B ZPC sing 406 n n C03 H03 ZPC sing 407 n n C03 H03A ZPC sing 408 n n C04 H04 ZPC sing 409 n n C04 H04A ZPC sing 410 n n C06 H06 ZPC sing 411 n n C06 H06A ZPC sing 412 n n C07 H07 ZPC sing 413 n n C07 H07A ZPC sing 414 n n C11 H11 ZPC sing 415 n n C17 H17 ZPC sing 416 n n C18 H18 ZPC sing 417 n n C23 H23 ZPC sing 418 n n C26 H26 ZPC sing 419 n n C27 H27 ZPC sing 420 n n # _atom_sites.entry_id 4A97 _atom_sites.fract_transf_matrix[1][1] 0.009488 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003304 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003748 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00956 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 ZPC A 1 1318 1318 ZPC ZPC . L 2 ZPC B 1 1318 1318 ZPC ZPC . M 2 ZPC C 1 1318 1318 ZPC ZPC . N 2 ZPC D 1 1318 1318 ZPC ZPC . O 2 ZPC E 1 1318 1318 ZPC ZPC . P 2 ZPC F 1 1318 1318 ZPC ZPC . Q 2 ZPC G 1 1318 1318 ZPC ZPC . R 2 ZPC H 1 1318 1318 ZPC ZPC . S 2 ZPC I 1 1318 1318 ZPC ZPC . T 2 ZPC J 1 1318 1318 ZPC ZPC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 ZPC . . . S 2 -104.433 -98.607 -55.297 1 94.27 ? C01 ZPC 1318 I 1 HETATM 2 N N02 ZPC . . . S 2 -105.167 -99.537 -56.113 1 89.32 ? N02 ZPC 1318 I 1 HETATM 3 C C03 ZPC . . . S 2 -105.978 -99.083 -57.221 1 69.68 ? C03 ZPC 1318 I 1 HETATM 4 C C04 ZPC . . . S 2 -105.98 -100.027 -58.353 1 56.84 ? C04 ZPC 1318 I 1 HETATM 5 N N05 ZPC . . . S 2 -105.276 -101.289 -58.275 1 92.48 ? N05 ZPC 1318 I 1 HETATM 6 C C06 ZPC . . . S 2 -104.31 -101.413 -57.291 1 84.63 ? C06 ZPC 1318 I 1 HETATM 7 C C07 ZPC . . . S 2 -104.951 -100.947 -56.046 1 91.41 ? C07 ZPC 1318 I 1 HETATM 8 C C08 ZPC . . . S 2 -104.973 -101.498 -59.663 1 125.52 ? C08 ZPC 1318 I 1 HETATM 9 O O09 ZPC . . . S 2 -105.679 -100.977 -60.498 1 148.3 ? O09 ZPC 1318 I 1 HETATM 10 O O10 ZPC . . . S 2 -103.838 -102.252 -59.997 1 97.97 ? O10 ZPC 1318 I 1 HETATM 11 C C11 ZPC . . . S 2 -103.149 -102.209 -61.259 1 79.62 ? C11 ZPC 1318 I 1 HETATM 12 N N12 ZPC . . . S 2 -103.71 -102.025 -62.596 1 62.37 ? N12 ZPC 1318 I 1 HETATM 13 C C13 ZPC . . . S 2 -102.839 -101.141 -63.388 1 69.32 ? C13 ZPC 1318 I 1 HETATM 14 O O14 ZPC . . . S 2 -102.782 -100.668 -64.522 1 87.55 ? O14 ZPC 1318 I 1 HETATM 15 C C15 ZPC . . . S 2 -101.727 -100.777 -62.487 1 73.91 ? C15 ZPC 1318 I 1 HETATM 16 N N16 ZPC . . . S 2 -100.687 -99.972 -62.809 1 61.84 ? N16 ZPC 1318 I 1 HETATM 17 C C17 ZPC . . . S 2 -99.804 -99.787 -61.822 1 51.51 ? C17 ZPC 1318 I 1 HETATM 18 C C18 ZPC . . . S 2 -99.93 -100.372 -60.526 1 65.15 ? C18 ZPC 1318 I 1 HETATM 19 N N19 ZPC . . . S 2 -100.954 -101.158 -60.212 1 79.17 ? N19 ZPC 1318 I 1 HETATM 20 C C20 ZPC . . . S 2 -101.882 -101.37 -61.222 1 85.74 ? C20 ZPC 1318 I 1 HETATM 21 C C21 ZPC . . . S 2 -104.961 -102.669 -63.115 1 85.73 ? C21 ZPC 1318 I 1 HETATM 22 N N22 ZPC . . . S 2 -105.854 -103.169 -62.23 1 71.37 ? N22 ZPC 1318 I 1 HETATM 23 C C23 ZPC . . . S 2 -107.023 -103.768 -62.556 1 73.07 ? C23 ZPC 1318 I 1 HETATM 24 C C24 ZPC . . . S 2 -107.363 -103.925 -63.884 1 92.37 ? C24 ZPC 1318 I 1 HETATM 25 CL CL ZPC . . . S 2 -108.892 -104.679 -64.163 1 167.74 ? CL ZPC 1318 I 1 HETATM 26 C C26 ZPC . . . S 2 -106.485 -103.466 -64.911 1 111.47 ? C26 ZPC 1318 I 1 HETATM 27 C C27 ZPC . . . S 2 -105.263 -102.827 -64.494 1 113.65 ? C27 ZPC 1318 I 1 # _model_server_stats.io_time_ms 304 _model_server_stats.parse_time_ms 59 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 27 #