data_4AAS
#
_model_server_result.job_id            HFxeNc5LIU7dpt_aXHsiag 
_model_server_result.datetime_utc      '2024-10-18 15:22:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4aas 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":1527}' 
#
_entry.id    4AAS 
#
_exptl.entry_id    4AAS 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4AAS 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4AAS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetradecameric 
_pdbx_struct_assembly.oligomeric_count      14 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 Q N N 
? 4 T N N 
? 4 W N N 
? 4 Z N N 
? 4 CA N N 
? 4 FA N N 
? 4 IA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 87 A ASP 87 1_555 P MG MG . A MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? 
metalc ? metalc2 A OD2 ASP 87 A ASP 87 1_555 P MG MG . A MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? 
metalc ? metalc3 P MG MG . A MG 1526 1_555 Q O3G ATP . A ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? 
metalc ? metalc4 P MG MG . A MG 1526 1_555 Q O1B ATP . A ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? 
metalc ? metalc5 P MG MG . A MG 1526 1_555 Q O2A ATP . A ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.831 ? 
metalc ? metalc6 B OD2 ASP 87 B ASP 87 1_555 S MG MG . B MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? 
metalc ? metalc7 B OD1 ASP 87 B ASP 87 1_555 S MG MG . B MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? 
metalc ? metalc8 S MG MG . B MG 1526 1_555 T O1B ATP . B ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? 
metalc ? metalc9 S MG MG . B MG 1526 1_555 T O3G ATP . B ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? 
metalc ? metalc10 S MG MG . B MG 1526 1_555 T O2A ATP . B ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.831 ? 
metalc ? metalc11 C OD1 ASP 87 C ASP 87 1_555 V MG MG . C MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? 
metalc ? metalc12 C OD2 ASP 87 C ASP 87 1_555 V MG MG . C MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? 
metalc ? metalc13 V MG MG . C MG 1526 1_555 W O3G ATP . C ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? 
metalc ? metalc14 V MG MG . C MG 1526 1_555 W O1B ATP . C ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? 
metalc ? metalc15 V MG MG . C MG 1526 1_555 W O2A ATP . C ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.83 ? 
metalc ? metalc16 D OD1 ASP 87 D ASP 87 1_555 Y MG MG . D MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? 
metalc ? metalc17 D OD2 ASP 87 D ASP 87 1_555 Y MG MG . D MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? 
metalc ? metalc18 Y MG MG . D MG 1526 1_555 Z O2A ATP . D ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.83 ? 
metalc ? metalc19 Y MG MG . D MG 1526 1_555 Z O3G ATP . D ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? 
metalc ? metalc20 Y MG MG . D MG 1526 1_555 Z O1B ATP . D ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? 
metalc ? metalc21 E OD1 ASP 87 E ASP 87 1_555 BA MG MG . E MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? 
metalc ? metalc22 E OD2 ASP 87 E ASP 87 1_555 BA MG MG . E MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? 
metalc ? metalc23 BA MG MG . E MG 1526 1_555 CA O1B ATP . E ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? 
metalc ? metalc24 BA MG MG . E MG 1526 1_555 CA O2A ATP . E ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.83 ? 
metalc ? metalc25 BA MG MG . E MG 1526 1_555 CA O3G ATP . E ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? 
metalc ? metalc26 F OD2 ASP 87 F ASP 87 1_555 EA MG MG . F MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? 
metalc ? metalc27 F OD1 ASP 87 F ASP 87 1_555 EA MG MG . F MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? 
metalc ? metalc28 EA MG MG . F MG 1526 1_555 FA O3G ATP . F ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? 
metalc ? metalc29 EA MG MG . F MG 1526 1_555 FA O2A ATP . F ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.831 ? 
metalc ? metalc30 EA MG MG . F MG 1526 1_555 FA O1B ATP . F ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? 
metalc ? metalc31 G OD2 ASP 87 G ASP 87 1_555 HA MG MG . G MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? 
metalc ? metalc32 G OD1 ASP 87 G ASP 87 1_555 HA MG MG . G MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? 
metalc ? metalc33 HA MG MG . G MG 1526 1_555 IA O3G ATP . G ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? 
metalc ? metalc34 HA MG MG . G MG 1526 1_555 IA O2A ATP . G ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.831 ? 
metalc ? metalc35 HA MG MG . G MG 1526 1_555 IA O1B ATP . G ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     4AAS 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
O 2 PO4 A 1 1525 1525 PO4 PO4 . 
P 3 MG A 1 1526 1526 MG MG . 
Q 4 ATP A 1 1527 1527 ATP ATP . 
R 2 PO4 B 1 1525 1525 PO4 PO4 . 
S 3 MG B 1 1526 1526 MG MG . 
T 4 ATP B 1 1527 1527 ATP ATP . 
U 2 PO4 C 1 1525 1525 PO4 PO4 . 
V 3 MG C 1 1526 1526 MG MG . 
W 4 ATP C 1 1527 1527 ATP ATP . 
X 2 PO4 D 1 1525 1525 PO4 PO4 . 
Y 3 MG D 1 1526 1526 MG MG . 
Z 4 ATP D 1 1527 1527 ATP ATP . 
AA 2 PO4 E 1 1525 1525 PO4 PO4 . 
BA 3 MG E 1 1526 1526 MG MG . 
CA 4 ATP E 1 1527 1527 ATP ATP . 
DA 2 PO4 F 1 1525 1525 PO4 PO4 . 
EA 3 MG F 1 1526 1526 MG MG . 
FA 4 ATP F 1 1527 1527 ATP ATP . 
GA 2 PO4 G 1 1525 1525 PO4 PO4 . 
HA 3 MG G 1 1526 1526 MG MG . 
IA 4 ATP G 1 1527 1527 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . Q 4 -22.823 40.111 23.769 1 0 ? PG ATP 1527 A 1 
HETATM 2 O O1G ATP . . . Q 4 -23.038 38.632 23.526 1 0 ? O1G ATP 1527 A 1 
HETATM 3 O O2G ATP . . . Q 4 -21.476 40.462 24.337 1 0 ? O2G ATP 1527 A 1 
HETATM 4 O O3G ATP . . . Q 4 -23.984 40.696 24.583 1 0 ? O3G ATP 1527 A 1 
HETATM 5 P PB ATP . . . Q 4 -22.826 42.427 22.432 1 0 ? PB ATP 1527 A 1 
HETATM 6 O O1B ATP . . . Q 4 -23.022 42.992 23.849 1 0 ? O1B ATP 1527 A 1 
HETATM 7 O O2B ATP . . . Q 4 -21.565 42.941 21.759 1 0 ? O2B ATP 1527 A 1 
HETATM 8 O O3B ATP . . . Q 4 -22.857 40.811 22.344 1 0 ? O3B ATP 1527 A 1 
HETATM 9 P PA ATP . . . Q 4 -25.324 42.632 22.045 1 0 ? PA ATP 1527 A 1 
HETATM 10 O O1A ATP . . . Q 4 -25.876 41.473 21.332 1 0 ? O1A ATP 1527 A 1 
HETATM 11 O O2A ATP . . . Q 4 -25.485 42.655 23.542 1 0 ? O2A ATP 1527 A 1 
HETATM 12 O O3A ATP . . . Q 4 -23.969 42.964 21.51 1 0 ? O3A ATP 1527 A 1 
HETATM 13 O O5' ATP . . . Q 4 -26.101 43.877 21.489 1 0 ? O5' ATP 1527 A 1 
HETATM 14 C C5' ATP . . . Q 4 -25.704 45.24 21.79 1 0 ? C5' ATP 1527 A 1 
HETATM 15 C C4' ATP . . . Q 4 -25.45 46.127 20.538 1 0 ? C4' ATP 1527 A 1 
HETATM 16 O O4' ATP . . . Q 4 -26.584 46.081 19.582 1 0 ? O4' ATP 1527 A 1 
HETATM 17 C C3' ATP . . . Q 4 -25.332 47.624 20.959 1 0 ? C3' ATP 1527 A 1 
HETATM 18 O O3' ATP . . . Q 4 -24.377 48.447 20.262 1 0 ? O3' ATP 1527 A 1 
HETATM 19 C C2' ATP . . . Q 4 -26.771 48.073 20.765 1 0 ? C2' ATP 1527 A 1 
HETATM 20 O O2' ATP . . . Q 4 -26.959 49.476 20.704 1 0 ? O2' ATP 1527 A 1 
HETATM 21 C C1' ATP . . . Q 4 -27.126 47.384 19.475 1 0 ? C1' ATP 1527 A 1 
HETATM 22 N N9 ATP . . . Q 4 -28.578 47.38 19.251 1 0 ? N9 ATP 1527 A 1 
HETATM 23 C C8 ATP . . . Q 4 -29.537 46.872 20.091 1 0 ? C8 ATP 1527 A 1 
HETATM 24 N N7 ATP . . . Q 4 -30.77 47.086 19.678 1 0 ? N7 ATP 1527 A 1 
HETATM 25 C C5 ATP . . . Q 4 -30.603 47.8 18.496 1 0 ? C5 ATP 1527 A 1 
HETATM 26 C C6 ATP . . . Q 4 -31.519 48.419 17.609 1 0 ? C6 ATP 1527 A 1 
HETATM 27 N N6 ATP . . . Q 4 -32.853 48.436 17.778 1 0 ? N6 ATP 1527 A 1 
HETATM 28 N N1 ATP . . . Q 4 -31.025 49.084 16.537 1 0 ? N1 ATP 1527 A 1 
HETATM 29 C C2 ATP . . . Q 4 -29.702 49.13 16.383 1 0 ? C2 ATP 1527 A 1 
HETATM 30 N N3 ATP . . . Q 4 -28.749 48.568 17.125 1 0 ? N3 ATP 1527 A 1 
HETATM 31 C C4 ATP . . . Q 4 -29.26 47.964 18.209 1 0 ? C4 ATP 1527 A 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    80 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#