data_4AAS # _model_server_result.job_id 2RGkLskFvGos1MD7YXzFLA _model_server_result.datetime_utc '2024-10-18 15:26:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4aas # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Z","auth_seq_id":1527}' # _entry.id 4AAS # _exptl.entry_id 4AAS _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4AAS _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AAS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetradecameric _pdbx_struct_assembly.oligomeric_count 14 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 Q N N ? 4 T N N ? 4 W N N ? 4 Z N N ? 4 CA N N ? 4 FA N N ? 4 IA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 87 A ASP 87 1_555 P MG MG . A MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? metalc ? metalc2 A OD2 ASP 87 A ASP 87 1_555 P MG MG . A MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc3 P MG MG . A MG 1526 1_555 Q O3G ATP . A ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? metalc ? metalc4 P MG MG . A MG 1526 1_555 Q O1B ATP . A ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? metalc ? metalc5 P MG MG . A MG 1526 1_555 Q O2A ATP . A ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.831 ? metalc ? metalc6 B OD2 ASP 87 B ASP 87 1_555 S MG MG . B MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc7 B OD1 ASP 87 B ASP 87 1_555 S MG MG . B MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? metalc ? metalc8 S MG MG . B MG 1526 1_555 T O1B ATP . B ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? metalc ? metalc9 S MG MG . B MG 1526 1_555 T O3G ATP . B ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? metalc ? metalc10 S MG MG . B MG 1526 1_555 T O2A ATP . B ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.831 ? metalc ? metalc11 C OD1 ASP 87 C ASP 87 1_555 V MG MG . C MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? metalc ? metalc12 C OD2 ASP 87 C ASP 87 1_555 V MG MG . C MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc13 V MG MG . C MG 1526 1_555 W O3G ATP . C ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? metalc ? metalc14 V MG MG . C MG 1526 1_555 W O1B ATP . C ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? metalc ? metalc15 V MG MG . C MG 1526 1_555 W O2A ATP . C ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.83 ? metalc ? metalc16 D OD1 ASP 87 D ASP 87 1_555 Y MG MG . D MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? metalc ? metalc17 D OD2 ASP 87 D ASP 87 1_555 Y MG MG . D MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc18 Y MG MG . D MG 1526 1_555 Z O2A ATP . D ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.83 ? metalc ? metalc19 Y MG MG . D MG 1526 1_555 Z O3G ATP . D ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? metalc ? metalc20 Y MG MG . D MG 1526 1_555 Z O1B ATP . D ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? metalc ? metalc21 E OD1 ASP 87 E ASP 87 1_555 BA MG MG . E MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? metalc ? metalc22 E OD2 ASP 87 E ASP 87 1_555 BA MG MG . E MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc23 BA MG MG . E MG 1526 1_555 CA O1B ATP . E ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? metalc ? metalc24 BA MG MG . E MG 1526 1_555 CA O2A ATP . E ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.83 ? metalc ? metalc25 BA MG MG . E MG 1526 1_555 CA O3G ATP . E ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? metalc ? metalc26 F OD2 ASP 87 F ASP 87 1_555 EA MG MG . F MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc27 F OD1 ASP 87 F ASP 87 1_555 EA MG MG . F MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? metalc ? metalc28 EA MG MG . F MG 1526 1_555 FA O3G ATP . F ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? metalc ? metalc29 EA MG MG . F MG 1526 1_555 FA O2A ATP . F ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.831 ? metalc ? metalc30 EA MG MG . F MG 1526 1_555 FA O1B ATP . F ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? metalc ? metalc31 G OD2 ASP 87 G ASP 87 1_555 HA MG MG . G MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? metalc ? metalc32 G OD1 ASP 87 G ASP 87 1_555 HA MG MG . G MG 1526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? metalc ? metalc33 HA MG MG . G MG 1526 1_555 IA O3G ATP . G ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? metalc ? metalc34 HA MG MG . G MG 1526 1_555 IA O2A ATP . G ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.831 ? metalc ? metalc35 HA MG MG . G MG 1526 1_555 IA O1B ATP . G ATP 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 70 n n PG O2G ATP sing 71 n n PG O3G ATP sing 72 n n PG O3B ATP sing 73 n n O2G HOG2 ATP sing 74 n n O3G HOG3 ATP sing 75 n n PB O1B ATP doub 76 n n PB O2B ATP sing 77 n n PB O3B ATP sing 78 n n PB O3A ATP sing 79 n n O2B HOB2 ATP sing 80 n n PA O1A ATP doub 81 n n PA O2A ATP sing 82 n n PA O3A ATP sing 83 n n PA O5' ATP sing 84 n n O2A HOA2 ATP sing 85 n n O5' C5' ATP sing 86 n n C5' C4' ATP sing 87 n n C5' "H5'1" ATP sing 88 n n C5' "H5'2" ATP sing 89 n n C4' O4' ATP sing 90 n n C4' C3' ATP sing 91 n n C4' H4' ATP sing 92 n n O4' C1' ATP sing 93 n n C3' O3' ATP sing 94 n n C3' C2' ATP sing 95 n n C3' H3' ATP sing 96 n n O3' HO3' ATP sing 97 n n C2' O2' ATP sing 98 n n C2' C1' ATP sing 99 n n C2' H2' ATP sing 100 n n O2' HO2' ATP sing 101 n n C1' N9 ATP sing 102 n n C1' H1' ATP sing 103 n n N9 C8 ATP sing 104 n y N9 C4 ATP sing 105 n y C8 N7 ATP doub 106 n y C8 H8 ATP sing 107 n n N7 C5 ATP sing 108 n y C5 C6 ATP sing 109 n y C5 C4 ATP doub 110 n y C6 N6 ATP sing 111 n n C6 N1 ATP doub 112 n y N6 HN61 ATP sing 113 n n N6 HN62 ATP sing 114 n n N1 C2 ATP sing 115 n y C2 N3 ATP doub 116 n y C2 H2 ATP sing 117 n n N3 C4 ATP sing 118 n y # _atom_sites.entry_id 4AAS _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code O 2 PO4 A 1 1525 1525 PO4 PO4 . P 3 MG A 1 1526 1526 MG MG . Q 4 ATP A 1 1527 1527 ATP ATP . R 2 PO4 B 1 1525 1525 PO4 PO4 . S 3 MG B 1 1526 1526 MG MG . T 4 ATP B 1 1527 1527 ATP ATP . U 2 PO4 C 1 1525 1525 PO4 PO4 . V 3 MG C 1 1526 1526 MG MG . W 4 ATP C 1 1527 1527 ATP ATP . X 2 PO4 D 1 1525 1525 PO4 PO4 . Y 3 MG D 1 1526 1526 MG MG . Z 4 ATP D 1 1527 1527 ATP ATP . AA 2 PO4 E 1 1525 1525 PO4 PO4 . BA 3 MG E 1 1526 1526 MG MG . CA 4 ATP E 1 1527 1527 ATP ATP . DA 2 PO4 F 1 1525 1525 PO4 PO4 . EA 3 MG F 1 1526 1526 MG MG . FA 4 ATP F 1 1527 1527 ATP ATP . GA 2 PO4 G 1 1525 1525 PO4 PO4 . HA 3 MG G 1 1526 1526 MG MG . IA 4 ATP G 1 1527 1527 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . Z 4 38.841 -30.11 23.75 1 0 ? PG ATP 1527 D 1 HETATM 2 O O1G ATP . . . Z 4 38.401 -28.683 23.502 1 0 ? O1G ATP 1527 D 1 HETATM 3 O O2G ATP . . . Z 4 37.773 -31.002 24.321 1 0 ? O2G ATP 1527 D 1 HETATM 4 O O3G ATP . . . Z 4 40.142 -30.139 24.563 1 0 ? O3G ATP 1527 D 1 HETATM 5 P PB ATP . . . Z 4 39.834 -32.208 22.424 1 0 ? PB ATP 1527 D 1 HETATM 6 O O1B ATP . . . Z 4 40.25 -32.627 23.844 1 0 ? O1B ATP 1527 D 1 HETATM 7 O O2B ATP . . . Z 4 38.911 -33.211 21.755 1 0 ? O2B ATP 1527 D 1 HETATM 8 O O3B ATP . . . Z 4 39.172 -30.733 22.326 1 0 ? O3B ATP 1527 D 1 HETATM 9 P PA ATP . . . Z 4 42.173 -31.332 22.033 1 0 ? PA ATP 1527 D 1 HETATM 10 O O1A ATP . . . Z 4 42.131 -30.042 21.331 1 0 ? O1A ATP 1527 D 1 HETATM 11 O O2A ATP . . . Z 4 42.341 -31.285 23.529 1 0 ? O2A ATP 1527 D 1 HETATM 12 O O3A ATP . . . Z 4 41.098 -32.225 21.506 1 0 ? O3A ATP 1527 D 1 HETATM 13 O O5' ATP . . . Z 4 43.411 -32.094 21.447 1 0 ? O5' ATP 1527 D 1 HETATM 14 C C5' ATP . . . Z 4 43.673 -33.489 21.754 1 0 ? C5' ATP 1527 D 1 HETATM 15 C C4' ATP . . . Z 4 43.807 -34.405 20.504 1 0 ? C4' ATP 1527 D 1 HETATM 16 O O4' ATP . . . Z 4 44.802 -33.884 19.534 1 0 ? O4' ATP 1527 D 1 HETATM 17 C C3' ATP . . . Z 4 44.35 -35.803 20.932 1 0 ? C3' ATP 1527 D 1 HETATM 18 O O3' ATP . . . Z 4 43.851 -36.964 20.24 1 0 ? O3' ATP 1527 D 1 HETATM 19 C C2' ATP . . . Z 4 45.841 -35.58 20.738 1 0 ? C2' ATP 1527 D 1 HETATM 20 O O2' ATP . . . Z 4 46.623 -36.76 20.69 1 0 ? O2' ATP 1527 D 1 HETATM 21 C C1' ATP . . . Z 4 45.861 -34.817 19.442 1 0 ? C1' ATP 1527 D 1 HETATM 22 N N9 ATP . . . Z 4 47.165 -34.18 19.218 1 0 ? N9 ATP 1527 D 1 HETATM 23 C C8 ATP . . . Z 4 47.811 -33.312 20.063 1 0 ? C8 ATP 1527 D 1 HETATM 24 N N7 ATP . . . Z 4 49.014 -32.969 19.651 1 0 ? N7 ATP 1527 D 1 HETATM 25 C C5 ATP . . . Z 4 49.17 -33.676 18.463 1 0 ? C5 ATP 1527 D 1 HETATM 26 C C6 ATP . . . Z 4 50.264 -33.835 17.576 1 0 ? C6 ATP 1527 D 1 HETATM 27 N N6 ATP . . . Z 4 51.473 -33.274 17.749 1 0 ? N6 ATP 1527 D 1 HETATM 28 N N1 ATP . . . Z 4 50.106 -34.643 16.502 1 0 ? N1 ATP 1527 D 1 HETATM 29 C C2 ATP . . . Z 4 48.932 -35.253 16.342 1 0 ? C2 ATP 1527 D 1 HETATM 30 N N3 ATP . . . Z 4 47.83 -35.163 17.086 1 0 ? N3 ATP 1527 D 1 HETATM 31 C C4 ATP . . . Z 4 48.031 -34.403 18.173 1 0 ? C4 ATP 1527 D 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 81 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #