data_4ACA
#
_model_server_result.job_id            pEpPCV3acTLtCFyusLKPLg 
_model_server_result.datetime_utc      '2024-11-26 22:10:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4aca 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":1479}' 
#
_entry.id    4ACA 
#
_exptl.entry_id    4ACA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              392.572 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4ACA 
_cell.length_a            146.86 
_cell.length_b            146.86 
_cell.length_c            297.83 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ACA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        151 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 1 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A 1 1 
B,E,F,G,H 2 1 
C,I,J,K,L,M,N,O,P,Q,R,S 3 1 
D 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 277 A GLY 263 1_555 A N CMH 278 A CMH 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 A C CMH 278 A CMH 264 1_555 A N ILE 279 A ILE 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 A C GLU 351 A GLU 337 1_555 A N CMH 352 A CMH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 A C CMH 352 A CMH 338 1_555 A N TYR 353 A TYR 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale5 A C TYR 353 A TYR 339 1_555 A N CMH 354 A CMH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale6 A C CMH 354 A CMH 340 1_555 A N ALA 355 A ALA 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale7 A C ILE 384 A ILE 370 1_555 A N CMH 385 A CMH 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale8 A C CMH 385 A CMH 371 1_555 A N GLY 386 A GLY 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale9 B C GLY 277 B GLY 263 1_555 B N CMH 278 B CMH 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale10 B C CMH 278 B CMH 264 1_555 B N ILE 279 B ILE 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale11 B C GLU 351 B GLU 337 1_555 B N CMH 352 B CMH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale12 B C CMH 352 B CMH 338 1_555 B N TYR 353 B TYR 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale13 B C TYR 353 B TYR 339 1_555 B N CMH 354 B CMH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale14 B C CMH 354 B CMH 340 1_555 B N ALA 355 B ALA 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale15 B C ILE 384 B ILE 370 1_555 B N CMH 385 B CMH 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale16 B C CMH 385 B CMH 371 1_555 B N GLY 386 B GLY 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale17 C C GLY 277 C GLY 263 1_555 C N CMH 278 C CMH 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale18 C C CMH 278 C CMH 264 1_555 C N ILE 279 C ILE 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale19 C C GLU 351 C GLU 337 1_555 C N CMH 352 C CMH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale20 C C CMH 352 C CMH 338 1_555 C N TYR 353 C TYR 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale21 C C TYR 353 C TYR 339 1_555 C N CMH 354 C CMH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale22 C C CMH 354 C CMH 340 1_555 C N ALA 355 C ALA 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale23 C C ILE 384 C ILE 370 1_555 C N CMH 385 C CMH 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale24 C C CMH 385 C CMH 371 1_555 C N GLY 386 C GLY 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale25 D C GLY 277 D GLY 263 1_555 D N CMH 278 D CMH 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale26 D C CMH 278 D CMH 264 1_555 D N ILE 279 D ILE 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale27 D C GLU 351 D GLU 337 1_555 D N CMH 352 D CMH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale28 D C CMH 352 D CMH 338 1_555 D N TYR 353 D TYR 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale29 D C TYR 353 D TYR 339 1_555 D N CMH 354 D CMH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale30 D C CMH 354 D CMH 340 1_555 D N ALA 355 D ALA 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale31 D C ILE 384 D ILE 370 1_555 D N CMH 385 D CMH 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale32 D C CMH 385 D CMH 371 1_555 D N GLY 386 D GLY 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
metalc ? metalc1 B O GLU 351 B GLU 337 1_555 B HG CMH 352 B CMH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? 
metalc ? metalc2 C O TYR 275 C TYR 261 1_555 C HG CMH 278 C CMH 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.112 ? 
metalc ? metalc3 C O GLU 351 C GLU 337 1_555 C HG CMH 352 C CMH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.953 ? 
#
_chem_comp.formula           'C24 H40 O4' 
_chem_comp.formula_weight    392.572 
_chem_comp.id                DXC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'DEOXYCHOLIC ACID' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 DXC sing 127 n n 
C1 C6 DXC sing 128 n n 
C1 O2 DXC sing 129 n n 
C1 H1 DXC sing 130 n n 
C2 C3 DXC sing 131 n n 
C2 H22 DXC sing 132 n n 
C2 H21 DXC sing 133 n n 
C3 C4 DXC sing 134 n n 
C3 C7 DXC sing 135 n n 
C3 H3 DXC sing 136 n n 
C4 C5 DXC sing 137 n n 
C4 C10 DXC sing 138 n n 
C4 C18 DXC sing 139 n n 
C5 C6 DXC sing 140 n n 
C5 H52 DXC sing 141 n n 
C5 H51 DXC sing 142 n n 
C6 H62 DXC sing 143 n n 
C6 H61 DXC sing 144 n n 
C7 C8 DXC sing 145 n n 
C7 H72 DXC sing 146 n n 
C7 H71 DXC sing 147 n n 
C8 C9 DXC sing 148 n n 
C8 H82 DXC sing 149 n n 
C8 H81 DXC sing 150 n n 
C9 C10 DXC sing 151 n n 
C9 C11 DXC sing 152 n n 
C9 H9 DXC sing 153 n n 
C10 C14 DXC sing 154 n n 
C10 H10 DXC sing 155 n n 
C11 C12 DXC sing 156 n n 
C11 C15 DXC sing 157 n n 
C11 H11 DXC sing 158 n n 
C12 C13 DXC sing 159 n n 
C12 C17 DXC sing 160 n n 
C12 C20 DXC sing 161 n n 
C13 C14 DXC sing 162 n n 
C13 O1 DXC sing 163 n n 
C13 H13 DXC sing 164 n n 
C14 H142 DXC sing 165 n n 
C14 H141 DXC sing 166 n n 
C15 C16 DXC sing 167 n n 
C15 H152 DXC sing 168 n n 
C15 H151 DXC sing 169 n n 
C16 C17 DXC sing 170 n n 
C16 H162 DXC sing 171 n n 
C16 H161 DXC sing 172 n n 
C17 C19 DXC sing 173 n n 
C17 H17 DXC sing 174 n n 
C18 H183 DXC sing 175 n n 
C18 H182 DXC sing 176 n n 
C18 H181 DXC sing 177 n n 
C19 C21 DXC sing 178 n n 
C19 C24 DXC sing 179 n n 
C19 H19 DXC sing 180 n n 
O1 H1O1 DXC sing 181 n n 
O2 H2 DXC sing 182 n n 
C20 H203 DXC sing 183 n n 
C20 H202 DXC sing 184 n n 
C20 H201 DXC sing 185 n n 
C21 C22 DXC sing 186 n n 
C21 H212 DXC sing 187 n n 
C21 H211 DXC sing 188 n n 
C22 C23 DXC sing 189 n n 
C22 H222 DXC sing 190 n n 
C22 H221 DXC sing 191 n n 
C23 O3 DXC doub 192 n n 
C23 O4 DXC sing 193 n n 
O4 HO4 DXC sing 194 n n 
C24 H243 DXC sing 195 n n 
C24 H242 DXC sing 196 n n 
C24 H241 DXC sing 197 n n 
#
_atom_sites.entry_id                     4ACA 
_atom_sites.fract_transf_matrix[1][1]    0.006809 
_atom_sites.fract_transf_matrix[1][2]    0.003931 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007863 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003358 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 B 1 1471 1471 SO4 SO4 . 
F 2 SO4 B 1 1472 1472 SO4 SO4 . 
G 3 DXC B 1 1473 1473 DXC DXC . 
H 4 5GP B 1 1474 1474 5GP 5GP . 
I 2 SO4 C 1 1471 1471 SO4 SO4 . 
J 2 SO4 C 1 1472 1472 SO4 SO4 . 
K 2 SO4 C 1 1473 1473 SO4 SO4 . 
L 2 SO4 C 1 1474 1474 SO4 SO4 . 
M 3 DXC C 1 1475 1475 DXC DXC . 
N 3 DXC C 1 1476 1476 DXC DXC . 
O 3 DXC C 1 1477 1477 DXC DXC . 
P 3 DXC C 1 1478 1478 DXC DXC . 
Q 3 DXC C 1 1479 1479 DXC DXC . 
R 3 DXC C 1 1480 1480 DXC DXC . 
S 2 SO4 C 1 1481 1481 SO4 SO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DXC . . . Q 3 53.308 -51.609 34.204 0.85 86.46 ? C1 DXC 1479 C 1 
HETATM 2 C C2 DXC . . . Q 3 51.886 -51.397 34.577 0.85 74.44 ? C2 DXC 1479 C 1 
HETATM 3 C C3 DXC . . . Q 3 51.028 -52.483 33.978 0.85 85.95 ? C3 DXC 1479 C 1 
HETATM 4 C C4 DXC . . . Q 3 51.234 -52.54 32.478 0.85 89.84 ? C4 DXC 1479 C 1 
HETATM 5 C C5 DXC . . . Q 3 52.694 -52.733 32.124 0.85 81.06 ? C5 DXC 1479 C 1 
HETATM 6 C C6 DXC . . . Q 3 53.452 -51.59 32.722 0.85 85.12 ? C6 DXC 1479 C 1 
HETATM 7 C C7 DXC . . . Q 3 49.528 -52.315 34.294 0.85 78.41 ? C7 DXC 1479 C 1 
HETATM 8 C C8 DXC . . . Q 3 48.944 -51.04 33.67 0.85 90.66 ? C8 DXC 1479 C 1 
HETATM 9 C C9 DXC . . . Q 3 49.242 -51.038 32.183 0.85 90.59 ? C9 DXC 1479 C 1 
HETATM 10 C C10 DXC . . . Q 3 50.687 -51.298 31.794 0.85 80.09 ? C10 DXC 1479 C 1 
HETATM 11 C C11 DXC . . . Q 3 48.898 -49.693 31.511 0.85 72.27 ? C11 DXC 1479 C 1 
HETATM 12 C C12 DXC . . . Q 3 49.004 -49.728 30.014 0.85 94.28 ? C12 DXC 1479 C 1 
HETATM 13 C C13 DXC . . . Q 3 50.422 -50.043 29.634 0.85 97.11 ? C13 DXC 1479 C 1 
HETATM 14 C C14 DXC . . . Q 3 50.841 -51.377 30.259 0.85 82.34 ? C14 DXC 1479 C 1 
HETATM 15 C C15 DXC . . . Q 3 47.459 -49.272 31.685 0.85 90.64 ? C15 DXC 1479 C 1 
HETATM 16 C C16 DXC . . . Q 3 47.302 -48.171 30.639 0.85 87.31 ? C16 DXC 1479 C 1 
HETATM 17 C C17 DXC . . . Q 3 48.422 -48.375 29.646 0.85 91.25 ? C17 DXC 1479 C 1 
HETATM 18 C C18 DXC . . . Q 3 50.571 -53.818 32.098 0.85 95.59 ? C18 DXC 1479 C 1 
HETATM 19 C C19 DXC . . . Q 3 47.904 -48.235 28.209 0.85 104.44 ? C19 DXC 1479 C 1 
HETATM 20 O O1 DXC . . . Q 3 51.336 -49.066 30.022 0.85 82.08 ? O1 DXC 1479 C 1 
HETATM 21 O O2 DXC . . . Q 3 54.078 -50.584 34.73 0.85 104.62 ? O2 DXC 1479 C 1 
HETATM 22 C C20 DXC . . . Q 3 48.131 -50.778 29.402 0.85 79.02 ? C20 DXC 1479 C 1 
HETATM 23 C C21 DXC . . . Q 3 46.575 -47.491 28.173 0.85 141.14 ? C21 DXC 1479 C 1 
HETATM 24 C C22 DXC . . . Q 3 46.408 -46.555 26.987 0.85 159.41 ? C22 DXC 1479 C 1 
HETATM 25 C C23 DXC . . . Q 3 44.976 -46.52 26.574 0.85 188.98 ? C23 DXC 1479 C 1 
HETATM 26 O O3 DXC . . . Q 3 44.075 -46.87 27.384 0.85 173.55 ? O3 DXC 1479 C 1 
HETATM 27 O O4 DXC . . . Q 3 44.675 -46.138 25.406 0.85 216.5 ? O4 DXC 1479 C 1 
HETATM 28 C C24 DXC . . . Q 3 48.929 -47.553 27.377 0.85 87.82 ? C24 DXC 1479 C 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           419 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           28 
#