data_4AD0
#
_model_server_result.job_id            hzlyDx1-2-aqinYFEBhiNQ 
_model_server_result.datetime_utc      '2024-11-13 04:25:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ad0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":500}' 
#
_entry.id    4AD0 
#
_exptl.entry_id    4AD0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.334 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          117.08 
_cell.angle_gamma         90 
_cell.entry_id            4AD0 
_cell.length_a            65.993 
_cell.length_b            168.428 
_cell.length_c            72.433 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4AD0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
PISA monomeric 1 software_defined_assembly 3 
PISA monomeric 1 software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,M 1 1 
B,G,H,N 2 1 
C,I,J,O 3 1 
D,K,L,P 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C11 H26 N2 O6' 
_chem_comp.formula_weight    282.334 
_chem_comp.id                B3P 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 B3P sing 70 n n 
C1 C3 B3P sing 71 n n 
C1 H11 B3P sing 72 n n 
C1 H12 B3P sing 73 n n 
C2 N2 B3P sing 74 n n 
C2 H21 B3P sing 75 n n 
C2 H22 B3P sing 76 n n 
C3 N1 B3P sing 77 n n 
C3 H31 B3P sing 78 n n 
C3 H32 B3P sing 79 n n 
N1 C4 B3P sing 80 n n 
N1 HN1 B3P sing 81 n n 
C4 C5 B3P sing 82 n n 
C4 C6 B3P sing 83 n n 
C4 C7 B3P sing 84 n n 
C5 O4 B3P sing 85 n n 
C5 H51 B3P sing 86 n n 
C5 H52 B3P sing 87 n n 
C6 O5 B3P sing 88 n n 
C6 H61 B3P sing 89 n n 
C6 H62 B3P sing 90 n n 
C7 O6 B3P sing 91 n n 
C7 H71 B3P sing 92 n n 
C7 H72 B3P sing 93 n n 
N2 C8 B3P sing 94 n n 
N2 HN2 B3P sing 95 n n 
C8 C9 B3P sing 96 n n 
C8 C10 B3P sing 97 n n 
C8 C11 B3P sing 98 n n 
C9 O1 B3P sing 99 n n 
C9 H91 B3P sing 100 n n 
C9 H92 B3P sing 101 n n 
C10 O2 B3P sing 102 n n 
C10 H101 B3P sing 103 n n 
C10 H102 B3P sing 104 n n 
C11 O3 B3P sing 105 n n 
C11 H111 B3P sing 106 n n 
C11 H112 B3P sing 107 n n 
O1 HO1 B3P sing 108 n n 
O2 HO2 B3P sing 109 n n 
O3 HO3 B3P sing 110 n n 
O4 HO4 B3P sing 111 n n 
O5 HO5 B3P sing 112 n n 
O6 HO6 B3P sing 113 n n 
#
_atom_sites.entry_id                     4AD0 
_atom_sites.fract_transf_matrix[1][1]    0.015153 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007748 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005937 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015506 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 B3P A 1 500 500 B3P B3P . 
F 3 GOL A 1 1378 1378 GOL GOL . 
G 2 B3P B 1 500 500 B3P B3P . 
H 3 GOL B 1 1379 1379 GOL GOL . 
I 2 B3P C 1 500 500 B3P B3P . 
J 3 GOL C 1 1379 1379 GOL GOL . 
K 2 B3P D 1 500 500 B3P B3P . 
L 3 GOL D 1 1378 1378 GOL GOL . 
M 4 HOH A 1 2001 2001 HOH HOH . 
M 4 HOH A 2 2002 2002 HOH HOH . 
M 4 HOH A 3 2003 2003 HOH HOH . 
M 4 HOH A 4 2004 2004 HOH HOH . 
M 4 HOH A 5 2005 2005 HOH HOH . 
M 4 HOH A 6 2006 2006 HOH HOH . 
M 4 HOH A 7 2007 2007 HOH HOH . 
M 4 HOH A 8 2008 2008 HOH HOH . 
M 4 HOH A 9 2009 2009 HOH HOH . 
M 4 HOH A 10 2010 2010 HOH HOH . 
M 4 HOH A 11 2011 2011 HOH HOH . 
M 4 HOH A 12 2012 2012 HOH HOH . 
M 4 HOH A 13 2013 2013 HOH HOH . 
M 4 HOH A 14 2014 2014 HOH HOH . 
M 4 HOH A 15 2015 2015 HOH HOH . 
M 4 HOH A 16 2016 2016 HOH HOH . 
M 4 HOH A 17 2017 2017 HOH HOH . 
M 4 HOH A 18 2018 2018 HOH HOH . 
M 4 HOH A 19 2019 2019 HOH HOH . 
M 4 HOH A 20 2020 2020 HOH HOH . 
M 4 HOH A 21 2021 2021 HOH HOH . 
M 4 HOH A 22 2022 2022 HOH HOH . 
M 4 HOH A 23 2023 2023 HOH HOH . 
M 4 HOH A 24 2024 2024 HOH HOH . 
M 4 HOH A 25 2025 2025 HOH HOH . 
M 4 HOH A 26 2026 2026 HOH HOH . 
M 4 HOH A 27 2027 2027 HOH HOH . 
M 4 HOH A 28 2028 2028 HOH HOH . 
M 4 HOH A 29 2029 2029 HOH HOH . 
M 4 HOH A 30 2030 2030 HOH HOH . 
M 4 HOH A 31 2031 2031 HOH HOH . 
M 4 HOH A 32 2032 2032 HOH HOH . 
M 4 HOH A 33 2033 2033 HOH HOH . 
M 4 HOH A 34 2034 2034 HOH HOH . 
M 4 HOH A 35 2035 2035 HOH HOH . 
M 4 HOH A 36 2036 2036 HOH HOH . 
M 4 HOH A 37 2037 2037 HOH HOH . 
M 4 HOH A 38 2038 2038 HOH HOH . 
M 4 HOH A 39 2039 2039 HOH HOH . 
M 4 HOH A 40 2040 2040 HOH HOH . 
M 4 HOH A 41 2041 2041 HOH HOH . 
M 4 HOH A 42 2042 2042 HOH HOH . 
M 4 HOH A 43 2043 2043 HOH HOH . 
M 4 HOH A 44 2044 2044 HOH HOH . 
M 4 HOH A 45 2045 2045 HOH HOH . 
M 4 HOH A 46 2046 2046 HOH HOH . 
M 4 HOH A 47 2047 2047 HOH HOH . 
N 4 HOH B 1 2001 2001 HOH HOH . 
N 4 HOH B 2 2002 2002 HOH HOH . 
N 4 HOH B 3 2003 2003 HOH HOH . 
N 4 HOH B 4 2004 2004 HOH HOH . 
N 4 HOH B 5 2005 2005 HOH HOH . 
N 4 HOH B 6 2006 2006 HOH HOH . 
N 4 HOH B 7 2007 2007 HOH HOH . 
N 4 HOH B 8 2008 2008 HOH HOH . 
N 4 HOH B 9 2009 2009 HOH HOH . 
N 4 HOH B 10 2010 2010 HOH HOH . 
N 4 HOH B 11 2011 2011 HOH HOH . 
N 4 HOH B 12 2012 2012 HOH HOH . 
N 4 HOH B 13 2013 2013 HOH HOH . 
N 4 HOH B 14 2014 2014 HOH HOH . 
N 4 HOH B 15 2015 2015 HOH HOH . 
N 4 HOH B 16 2016 2016 HOH HOH . 
N 4 HOH B 17 2017 2017 HOH HOH . 
N 4 HOH B 18 2018 2018 HOH HOH . 
N 4 HOH B 19 2019 2019 HOH HOH . 
N 4 HOH B 20 2020 2020 HOH HOH . 
N 4 HOH B 21 2021 2021 HOH HOH . 
N 4 HOH B 22 2022 2022 HOH HOH . 
N 4 HOH B 23 2023 2023 HOH HOH . 
N 4 HOH B 24 2024 2024 HOH HOH . 
N 4 HOH B 25 2025 2025 HOH HOH . 
N 4 HOH B 26 2026 2026 HOH HOH . 
N 4 HOH B 27 2027 2027 HOH HOH . 
N 4 HOH B 28 2028 2028 HOH HOH . 
N 4 HOH B 29 2029 2029 HOH HOH . 
N 4 HOH B 30 2030 2030 HOH HOH . 
N 4 HOH B 31 2031 2031 HOH HOH . 
N 4 HOH B 32 2032 2032 HOH HOH . 
N 4 HOH B 33 2033 2033 HOH HOH . 
N 4 HOH B 34 2034 2034 HOH HOH . 
N 4 HOH B 35 2035 2035 HOH HOH . 
N 4 HOH B 36 2036 2036 HOH HOH . 
N 4 HOH B 37 2037 2037 HOH HOH . 
N 4 HOH B 38 2038 2038 HOH HOH . 
N 4 HOH B 39 2039 2039 HOH HOH . 
O 4 HOH C 1 2001 2001 HOH HOH . 
O 4 HOH C 2 2002 2002 HOH HOH . 
O 4 HOH C 3 2003 2003 HOH HOH . 
O 4 HOH C 4 2004 2004 HOH HOH . 
O 4 HOH C 5 2005 2005 HOH HOH . 
O 4 HOH C 6 2006 2006 HOH HOH . 
O 4 HOH C 7 2007 2007 HOH HOH . 
O 4 HOH C 8 2008 2008 HOH HOH . 
O 4 HOH C 9 2009 2009 HOH HOH . 
O 4 HOH C 10 2010 2010 HOH HOH . 
O 4 HOH C 11 2011 2011 HOH HOH . 
O 4 HOH C 12 2012 2012 HOH HOH . 
O 4 HOH C 13 2013 2013 HOH HOH . 
O 4 HOH C 14 2014 2014 HOH HOH . 
O 4 HOH C 15 2015 2015 HOH HOH . 
O 4 HOH C 16 2016 2016 HOH HOH . 
O 4 HOH C 17 2017 2017 HOH HOH . 
O 4 HOH C 18 2018 2018 HOH HOH . 
O 4 HOH C 19 2019 2019 HOH HOH . 
O 4 HOH C 20 2020 2020 HOH HOH . 
O 4 HOH C 21 2021 2021 HOH HOH . 
O 4 HOH C 22 2022 2022 HOH HOH . 
O 4 HOH C 23 2023 2023 HOH HOH . 
O 4 HOH C 24 2024 2024 HOH HOH . 
O 4 HOH C 25 2025 2025 HOH HOH . 
O 4 HOH C 26 2026 2026 HOH HOH . 
O 4 HOH C 27 2027 2027 HOH HOH . 
O 4 HOH C 28 2028 2028 HOH HOH . 
O 4 HOH C 29 2029 2029 HOH HOH . 
O 4 HOH C 30 2030 2030 HOH HOH . 
O 4 HOH C 31 2031 2031 HOH HOH . 
O 4 HOH C 32 2032 2032 HOH HOH . 
O 4 HOH C 33 2033 2033 HOH HOH . 
O 4 HOH C 34 2034 2034 HOH HOH . 
O 4 HOH C 35 2035 2035 HOH HOH . 
O 4 HOH C 36 2036 2036 HOH HOH . 
O 4 HOH C 37 2037 2037 HOH HOH . 
O 4 HOH C 38 2038 2038 HOH HOH . 
O 4 HOH C 39 2039 2039 HOH HOH . 
O 4 HOH C 40 2040 2040 HOH HOH . 
O 4 HOH C 41 2041 2041 HOH HOH . 
O 4 HOH C 42 2042 2042 HOH HOH . 
O 4 HOH C 43 2043 2043 HOH HOH . 
O 4 HOH C 44 2044 2044 HOH HOH . 
O 4 HOH C 45 2045 2045 HOH HOH . 
O 4 HOH C 46 2046 2046 HOH HOH . 
P 4 HOH D 1 2001 2001 HOH HOH . 
P 4 HOH D 2 2002 2002 HOH HOH . 
P 4 HOH D 3 2003 2003 HOH HOH . 
P 4 HOH D 4 2004 2004 HOH HOH . 
P 4 HOH D 5 2005 2005 HOH HOH . 
P 4 HOH D 6 2006 2006 HOH HOH . 
P 4 HOH D 7 2007 2007 HOH HOH . 
P 4 HOH D 8 2008 2008 HOH HOH . 
P 4 HOH D 9 2009 2009 HOH HOH . 
P 4 HOH D 10 2010 2010 HOH HOH . 
P 4 HOH D 11 2011 2011 HOH HOH . 
P 4 HOH D 12 2012 2012 HOH HOH . 
P 4 HOH D 13 2013 2013 HOH HOH . 
P 4 HOH D 14 2014 2014 HOH HOH . 
P 4 HOH D 15 2015 2015 HOH HOH . 
P 4 HOH D 16 2016 2016 HOH HOH . 
P 4 HOH D 17 2017 2017 HOH HOH . 
P 4 HOH D 18 2018 2018 HOH HOH . 
P 4 HOH D 19 2019 2019 HOH HOH . 
P 4 HOH D 20 2020 2020 HOH HOH . 
P 4 HOH D 21 2021 2021 HOH HOH . 
P 4 HOH D 22 2022 2022 HOH HOH . 
P 4 HOH D 23 2023 2023 HOH HOH . 
P 4 HOH D 24 2024 2024 HOH HOH . 
P 4 HOH D 25 2025 2025 HOH HOH . 
P 4 HOH D 26 2026 2026 HOH HOH . 
P 4 HOH D 27 2027 2027 HOH HOH . 
P 4 HOH D 28 2028 2028 HOH HOH . 
P 4 HOH D 29 2029 2029 HOH HOH . 
P 4 HOH D 30 2030 2030 HOH HOH . 
P 4 HOH D 31 2031 2031 HOH HOH . 
P 4 HOH D 32 2032 2032 HOH HOH . 
P 4 HOH D 33 2033 2033 HOH HOH . 
P 4 HOH D 34 2034 2034 HOH HOH . 
P 4 HOH D 35 2035 2035 HOH HOH . 
P 4 HOH D 36 2036 2036 HOH HOH . 
P 4 HOH D 37 2037 2037 HOH HOH . 
P 4 HOH D 38 2038 2038 HOH HOH . 
P 4 HOH D 39 2039 2039 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 B3P . . . K 2 70.625 36.665 -1.98 1 17.67 ? C1 B3P 500 D 1 
HETATM 2 C C2 B3P . . . K 2 70.679 37.499 -3.248 1 16.91 ? C2 B3P 500 D 1 
HETATM 3 C C3 B3P . . . K 2 70.618 35.173 -2.259 1 19 ? C3 B3P 500 D 1 
HETATM 4 N N1 B3P . . . K 2 71.93 34.601 -1.999 1 21.09 ? N1 B3P 500 D 1 
HETATM 5 C C4 B3P . . . K 2 72.203 33.169 -1.963 1 23.14 ? C4 B3P 500 D 1 
HETATM 6 C C5 B3P . . . K 2 73.497 32.903 -1.181 1 23.87 ? C5 B3P 500 D 1 
HETATM 7 C C6 B3P . . . K 2 71.128 32.438 -1.158 1 23.71 ? C6 B3P 500 D 1 
HETATM 8 C C7 B3P . . . K 2 72.347 32.696 -3.405 1 24.55 ? C7 B3P 500 D 1 
HETATM 9 N N2 B3P . . . K 2 70.371 38.889 -2.915 1 16.67 ? N2 B3P 500 D 1 
HETATM 10 C C8 B3P . . . K 2 70.791 39.978 -3.763 1 16.81 ? C8 B3P 500 D 1 
HETATM 11 C C9 B3P . . . K 2 72.28 39.918 -4.102 1 17 ? C9 B3P 500 D 1 
HETATM 12 C C10 B3P . . . K 2 70.029 39.866 -5.082 1 17.11 ? C10 B3P 500 D 1 
HETATM 13 C C11 B3P . . . K 2 70.496 41.283 -3.04 1 17.07 ? C11 B3P 500 D 1 
HETATM 14 O O1 B3P . . . K 2 73.096 39.798 -2.908 1 18.05 ? O1 B3P 500 D 1 
HETATM 15 O O2 B3P . . . K 2 69.278 41.06 -5.228 1 19 ? O2 B3P 500 D 1 
HETATM 16 O O3 B3P . . . K 2 69.309 41.214 -2.236 1 17.29 ? O3 B3P 500 D 1 
HETATM 17 O O4 B3P . . . K 2 73.729 31.493 -0.993 1 22.43 ? O4 B3P 500 D 1 
HETATM 18 O O5 B3P . . . K 2 70.066 32.048 -2.007 1 27.53 ? O5 B3P 500 D 1 
HETATM 19 O O6 B3P . . . K 2 72.579 33.843 -4.25 1 25.43 ? O6 B3P 500 D 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           240 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           19 
#