data_4ADW # _model_server_result.job_id B9ZAw87GKZCaAx0I0olo8A _model_server_result.datetime_utc '2024-11-30 04:46:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4adw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1490}' # _entry.id 4ADW # _exptl.entry_id 4ADW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ADW _cell.length_a 103.94 _cell.length_b 103.94 _cell.length_c 192.244 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ADW _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 422 n n PA O2A NDP sing 423 n n PA O5B NDP sing 424 n n PA O3 NDP sing 425 n n O2A HOA2 NDP sing 426 n n O5B C5B NDP sing 427 n n C5B C4B NDP sing 428 n n C5B H51A NDP sing 429 n n C5B H52A NDP sing 430 n n C4B O4B NDP sing 431 n n C4B C3B NDP sing 432 n n C4B H4B NDP sing 433 n n O4B C1B NDP sing 434 n n C3B O3B NDP sing 435 n n C3B C2B NDP sing 436 n n C3B H3B NDP sing 437 n n O3B HO3A NDP sing 438 n n C2B O2B NDP sing 439 n n C2B C1B NDP sing 440 n n C2B H2B NDP sing 441 n n O2B P2B NDP sing 442 n n C1B N9A NDP sing 443 n n C1B H1B NDP sing 444 n n N9A C8A NDP sing 445 n y N9A C4A NDP sing 446 n y C8A N7A NDP doub 447 n y C8A H8A NDP sing 448 n n N7A C5A NDP sing 449 n y C5A C6A NDP sing 450 n y C5A C4A NDP doub 451 n y C6A N6A NDP sing 452 n n C6A N1A NDP doub 453 n y N6A H61A NDP sing 454 n n N6A H62A NDP sing 455 n n N1A C2A NDP sing 456 n y C2A N3A NDP doub 457 n y C2A H2A NDP sing 458 n n N3A C4A NDP sing 459 n y O3 PN NDP sing 460 n n PN O1N NDP doub 461 n n PN O2N NDP sing 462 n n PN O5D NDP sing 463 n n O2N H21N NDP sing 464 n n O5D C5D NDP sing 465 n n C5D C4D NDP sing 466 n n C5D H51N NDP sing 467 n n C5D H52N NDP sing 468 n n C4D O4D NDP sing 469 n n C4D C3D NDP sing 470 n n C4D H4D NDP sing 471 n n O4D C1D NDP sing 472 n n C3D O3D NDP sing 473 n n C3D C2D NDP sing 474 n n C3D H3D NDP sing 475 n n O3D HO3N NDP sing 476 n n C2D O2D NDP sing 477 n n C2D C1D NDP sing 478 n n C2D H2D NDP sing 479 n n O2D HO2N NDP sing 480 n n C1D N1N NDP sing 481 n n C1D H1D NDP sing 482 n n N1N C2N NDP sing 483 n n N1N C6N NDP sing 484 n n C2N C3N NDP doub 485 n n C2N H2N NDP sing 486 n n C3N C7N NDP sing 487 n n C3N C4N NDP sing 488 n n C7N O7N NDP doub 489 n n C7N N7N NDP sing 490 n n N7N H71N NDP sing 491 n n N7N H72N NDP sing 492 n n C4N C5N NDP sing 493 n n C4N H41N NDP sing 494 n n C4N H42N NDP sing 495 n n C5N C6N NDP doub 496 n n C5N H5N NDP sing 497 n n C6N H6N NDP sing 498 n n P2B O1X NDP doub 499 n n P2B O2X NDP sing 500 n n P2B O3X NDP sing 501 n n O2X HOP2 NDP sing 502 n n O3X HOP3 NDP sing 503 n n # _atom_sites.entry_id 4ADW _atom_sites.fract_transf_matrix[1][1] 0.009621 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009621 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005202 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 1489 1489 FAD FAD . D 3 NDP A 1 1490 1490 NDP NDP . E 4 GCG A 1 1491 1491 GCG GCG . F 2 FAD B 1 1489 1489 FAD FAD . G 3 NDP B 1 1490 1490 NDP NDP . H 4 GCG B 1 1491 1491 GCG GCG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . D 3 -2.737 20.427 -7.491 0.75 85 ? PA NDP 1490 A 1 HETATM 2 O O1A NDP . . . D 3 -4.128 19.881 -8.199 0.75 85 ? O1A NDP 1490 A 1 HETATM 3 O O2A NDP . . . D 3 -2.172 21.754 -7.926 0.75 85 ? O2A NDP 1490 A 1 HETATM 4 O O5B NDP . . . D 3 -2.11 19.918 -8.909 0.75 85 ? O5B NDP 1490 A 1 HETATM 5 C C5B NDP . . . D 3 -2.544 18.704 -9.549 0.75 85 ? C5B NDP 1490 A 1 HETATM 6 C C4B NDP . . . D 3 -1.73 18.354 -10.797 0.75 85 ? C4B NDP 1490 A 1 HETATM 7 O O4B NDP . . . D 3 -2.061 16.985 -11.178 0.75 85 ? O4B NDP 1490 A 1 HETATM 8 C C3B NDP . . . D 3 -2.18 19.255 -11.947 0.75 85 ? C3B NDP 1490 A 1 HETATM 9 O O3B NDP . . . D 3 -1.039 19.623 -12.731 0.75 85 ? O3B NDP 1490 A 1 HETATM 10 C C2B NDP . . . D 3 -3.133 18.366 -12.743 0.75 85 ? C2B NDP 1490 A 1 HETATM 11 O O2B NDP . . . D 3 -3.119 18.704 -14.127 0.75 85 ? O2B NDP 1490 A 1 HETATM 12 C C1B NDP . . . D 3 -2.516 16.99 -12.553 0.75 85 ? C1B NDP 1490 A 1 HETATM 13 N N9A NDP . . . D 3 -3.53 15.922 -12.721 0.75 85 ? N9A NDP 1490 A 1 HETATM 14 C C8A NDP . . . D 3 -4.77 15.923 -12.226 0.75 85 ? C8A NDP 1490 A 1 HETATM 15 N N7A NDP . . . D 3 -5.389 14.798 -12.577 0.75 85 ? N7A NDP 1490 A 1 HETATM 16 C C5A NDP . . . D 3 -4.539 14.073 -13.29 0.75 85 ? C5A NDP 1490 A 1 HETATM 17 C C6A NDP . . . D 3 -4.622 12.834 -13.906 0.75 85 ? C6A NDP 1490 A 1 HETATM 18 N N6A NDP . . . D 3 -5.743 12.128 -13.829 0.75 85 ? N6A NDP 1490 A 1 HETATM 19 N N1A NDP . . . D 3 -3.555 12.362 -14.575 0.75 85 ? N1A NDP 1490 A 1 HETATM 20 C C2A NDP . . . D 3 -2.43 13.067 -14.652 0.75 85 ? C2A NDP 1490 A 1 HETATM 21 N N3A NDP . . . D 3 -2.321 14.257 -14.072 0.75 85 ? N3A NDP 1490 A 1 HETATM 22 C C4A NDP . . . D 3 -3.355 14.784 -13.387 0.75 85 ? C4A NDP 1490 A 1 HETATM 23 O O3 NDP . . . D 3 -1.707 19.224 -6.957 0.75 85 ? O3 NDP 1490 A 1 HETATM 24 P PN NDP . . . D 3 -1.028 19.168 -5.468 0.75 85 ? PN NDP 1490 A 1 HETATM 25 O O1N NDP . . . D 3 -0.025 20.181 -6.303 0.75 85 ? O1N NDP 1490 A 1 HETATM 26 O O2N NDP . . . D 3 -1.014 17.688 -5.736 0.75 85 ? O2N NDP 1490 A 1 HETATM 27 O O5D NDP . . . D 3 -2.461 19.869 -5.002 0.75 85 ? O5D NDP 1490 A 1 HETATM 28 C C5D NDP . . . D 3 -2.712 20.124 -3.603 0.75 85 ? C5D NDP 1490 A 1 HETATM 29 C C4D NDP . . . D 3 -3.268 21.55 -3.301 0.75 85 ? C4D NDP 1490 A 1 HETATM 30 O O4D NDP . . . D 3 -2.536 22.074 -2.151 0.75 85 ? O4D NDP 1490 A 1 HETATM 31 C C3D NDP . . . D 3 -3.14 22.556 -4.453 0.75 85 ? C3D NDP 1490 A 1 HETATM 32 O O3D NDP . . . D 3 -4.445 23.032 -4.818 0.75 85 ? O3D NDP 1490 A 1 HETATM 33 C C2D NDP . . . D 3 -2.292 23.712 -3.919 0.75 85 ? C2D NDP 1490 A 1 HETATM 34 O O2D NDP . . . D 3 -3.066 24.927 -3.884 0.75 85 ? O2D NDP 1490 A 1 HETATM 35 C C1D NDP . . . D 3 -1.831 23.308 -2.503 0.75 85 ? C1D NDP 1490 A 1 HETATM 36 N N1N NDP . . . D 3 -0.346 23.13 -2.344 0.75 85 ? N1N NDP 1490 A 1 HETATM 37 C C2N NDP . . . D 3 0.485 24.244 -2.119 0.75 85 ? C2N NDP 1490 A 1 HETATM 38 C C3N NDP . . . D 3 1.865 24.083 -1.957 0.75 85 ? C3N NDP 1490 A 1 HETATM 39 C C7N NDP . . . D 3 2.773 25.309 -1.725 0.75 85 ? C7N NDP 1490 A 1 HETATM 40 O O7N NDP . . . D 3 3.99 25.182 -1.581 0.75 85 ? O7N NDP 1490 A 1 HETATM 41 N N7N NDP . . . D 3 2.148 26.488 -1.699 0.75 85 ? N7N NDP 1490 A 1 HETATM 42 C C4N NDP . . . D 3 2.513 22.686 -2.006 0.75 85 ? C4N NDP 1490 A 1 HETATM 43 C C5N NDP . . . D 3 1.6 21.653 -2.226 0.75 85 ? C5N NDP 1490 A 1 HETATM 44 C C6N NDP . . . D 3 0.231 21.851 -2.386 0.75 85 ? C6N NDP 1490 A 1 HETATM 45 P P2B NDP . . . D 3 -4.195 19.749 -14.697 0.75 85 ? P2B NDP 1490 A 1 HETATM 46 O O1X NDP . . . D 3 -3.618 21.199 -14.309 0.75 85 ? O1X NDP 1490 A 1 HETATM 47 O O2X NDP . . . D 3 -4.067 19.633 -16.296 0.75 85 ? O2X NDP 1490 A 1 HETATM 48 O O3X NDP . . . D 3 -5.567 19.508 -14.217 0.75 85 ? O3X NDP 1490 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 353 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 48 #