data_4AFT # _model_server_result.job_id 3Vc0V0mg-o1w4iYJLRtBJA _model_server_result.datetime_utc '2024-10-20 19:45:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4aft # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 4AFT # _exptl.entry_id 4AFT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 211.262 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description VARENICLINE _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4AFT _cell.length_a 207.299 _cell.length_b 207.299 _cell.length_c 207.299 _cell.Z_PDB 120 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AFT _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 125 A CYS 125 1_555 A SG CYS 138 A CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 188 A CYS 188 1_555 A SG CYS 189 A CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf3 B SG CYS 125 B CYS 125 1_555 B SG CYS 138 B CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 188 B CYS 188 1_555 B SG CYS 189 B CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf5 C SG CYS 125 C CYS 125 1_555 C SG CYS 138 C CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 C SG CYS 188 C CYS 188 1_555 C SG CYS 189 C CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf7 D SG CYS 125 D CYS 125 1_555 D SG CYS 138 D CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 D SG CYS 188 D CYS 188 1_555 D SG CYS 189 D CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf9 E SG CYS 125 E CYS 125 1_555 E SG CYS 138 E CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf10 E SG CYS 188 E CYS 188 1_555 E SG CYS 189 E CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? # _chem_comp.formula 'C13 H13 N3' _chem_comp.formula_weight 211.262 _chem_comp.id QMR _chem_comp.mon_nstd_flag . _chem_comp.name VARENICLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 N02 QMR sing 275 n n C01 C06 QMR sing 276 n n N02 C03 QMR sing 277 n n C03 C04 QMR sing 278 n n C04 C05 QMR sing 279 n n C04 C16 QMR sing 280 n n C05 C06 QMR sing 281 n n C06 C07 QMR sing 282 n n C07 C08 QMR doub 283 n y C07 C16 QMR sing 284 n y C08 C09 QMR sing 285 n y C09 N10 QMR doub 286 n y C09 C14 QMR sing 287 n y N10 C11 QMR sing 288 n y C11 C12 QMR doub 289 n y C12 N13 QMR sing 290 n y N13 C14 QMR doub 291 n y C14 C15 QMR sing 292 n y C15 C16 QMR doub 293 n y C01 H011 QMR sing 294 n n C01 H012 QMR sing 295 n n N02 H02 QMR sing 296 n n C06 H06 QMR sing 297 n n C03 H031 QMR sing 298 n n C03 H032 QMR sing 299 n n C04 H04 QMR sing 300 n n C05 H051 QMR sing 301 n n C05 H052 QMR sing 302 n n C08 H08 QMR sing 303 n n C11 H11 QMR sing 304 n n C12 H12 QMR sing 305 n n C15 H15 QMR sing 306 n n # _atom_sites.entry_id 4AFT _atom_sites.fract_transf_matrix[1][1] 0.004824 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004824 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 QMR A 1 301 301 QMR QMR . G 2 QMR B 1 301 301 QMR QMR . H 2 QMR C 1 301 301 QMR QMR . I 2 QMR D 1 301 301 QMR QMR . J 2 QMR E 1 301 301 QMR QMR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 QMR . . . F 2 -29.44 -88.984 28.838 1 109.92 ? C01 QMR 301 A 1 HETATM 2 N N02 QMR . . . F 2 -28.28 -88.242 29.383 1 109.92 ? N02 QMR 301 A 1 HETATM 3 C C03 QMR . . . F 2 -28.724 -87.268 30.406 1 109.92 ? C03 QMR 301 A 1 HETATM 4 C C04 QMR . . . F 2 -29.78 -86.344 29.825 1 109.92 ? C04 QMR 301 A 1 HETATM 5 C C05 QMR . . . F 2 -30.986 -87.224 29.515 1 109.92 ? C05 QMR 301 A 1 HETATM 6 C C06 QMR . . . F 2 -30.494 -88.017 28.313 1 109.92 ? C06 QMR 301 A 1 HETATM 7 C C07 QMR . . . F 2 -29.809 -86.973 27.541 1 109.92 ? C07 QMR 301 A 1 HETATM 8 C C08 QMR . . . F 2 -29.536 -86.886 26.189 1 109.92 ? C08 QMR 301 A 1 HETATM 9 C C09 QMR . . . F 2 -28.831 -85.763 25.758 1 109.92 ? C09 QMR 301 A 1 HETATM 10 N N10 QMR . . . F 2 -28.535 -85.592 24.456 1 109.92 ? N10 QMR 301 A 1 HETATM 11 C C11 QMR . . . F 2 -27.854 -84.504 24.058 1 109.92 ? C11 QMR 301 A 1 HETATM 12 C C12 QMR . . . F 2 -27.435 -83.524 24.962 1 109.92 ? C12 QMR 301 A 1 HETATM 13 N N13 QMR . . . F 2 -27.701 -83.637 26.269 1 109.92 ? N13 QMR 301 A 1 HETATM 14 C C14 QMR . . . F 2 -28.38 -84.711 26.724 1 109.92 ? C14 QMR 301 A 1 HETATM 15 C C15 QMR . . . F 2 -28.657 -84.835 28.077 1 109.92 ? C15 QMR 301 A 1 HETATM 16 C C16 QMR . . . F 2 -29.364 -85.947 28.48 1 109.92 ? C16 QMR 301 A 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 55 _model_server_stats.query_time_ms 530 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 16 #