data_4AIN # _model_server_result.job_id kFCo1YUk-PzFwBQKM-yIEw _model_server_result.datetime_utc '2024-11-18 23:49:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ain # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1559}' # _entry.id 4AIN # _exptl.entry_id 4AIN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 494.573 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4AIN _cell.length_a 112.81 _cell.length_b 128.15 _cell.length_c 159.69 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AIN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id M _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O ALA 107 B ALA 147 1_555 D NA NA . B NA 1558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc2 B O MET 110 B MET 150 1_555 D NA NA . B NA 1558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc3 B O PHE 424 B PHE 464 1_555 D NA NA . B NA 1558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc4 B OG1 THR 427 B THR 467 1_555 D NA NA . B NA 1558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc5 B OG SER 428 B SER 468 1_555 D NA NA . B NA 1558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? # _chem_comp.formula 'C23 H42 O11' _chem_comp.formula_weight 494.573 _chem_comp.id CM5 _chem_comp.mon_nstd_flag . _chem_comp.name 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '5-CYCLOHEXYLPENTYL 4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE;CYMAL-5' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C8 CM5 sing 89 n n C7 C6 CM5 sing 90 n n C7 H71 CM5 sing 91 n n C7 H72 CM5 sing 92 n n C8 C9 CM5 sing 93 n n C8 H81 CM5 sing 94 n n C8 H82 CM5 sing 95 n n C9 C10 CM5 sing 96 n n C9 H91 CM5 sing 97 n n C9 H92 CM5 sing 98 n n C10 C11 CM5 sing 99 n n C10 H101 CM5 sing 100 n n C10 H102 CM5 sing 101 n n C11 C6 CM5 sing 102 n n C11 H111 CM5 sing 103 n n C11 H112 CM5 sing 104 n n C6 C5 CM5 sing 105 n n C6 H6 CM5 sing 106 n n C5 C4 CM5 sing 107 n n C5 H51 CM5 sing 108 n n C5 H52 CM5 sing 109 n n C4 C3 CM5 sing 110 n n C4 H41 CM5 sing 111 n n C4 H42 CM5 sing 112 n n C3 C2 CM5 sing 113 n n C3 H31A CM5 sing 114 n n C3 H32A CM5 sing 115 n n C2 C1 CM5 sing 116 n n C2 H21A CM5 sing 117 n n C2 H22A CM5 sing 118 n n C1 O12 CM5 sing 119 n n C1 H11 CM5 sing 120 n n C1 H12 CM5 sing 121 n n O12 C13 CM5 sing 122 n n C13 C18 CM5 sing 123 n n C13 O14 CM5 sing 124 n n C13 H13 CM5 sing 125 n n C18 O22 CM5 sing 126 n n C18 C17 CM5 sing 127 n n C18 H18 CM5 sing 128 n n O22 H22 CM5 sing 129 n n C17 O21 CM5 sing 130 n n C17 C16 CM5 sing 131 n n C17 H17 CM5 sing 132 n n O21 H21 CM5 sing 133 n n O14 C15 CM5 sing 134 n n C15 C19 CM5 sing 135 n n C15 C16 CM5 sing 136 n n C15 H15 CM5 sing 137 n n C19 O20 CM5 sing 138 n n C19 H191 CM5 sing 139 n n C19 H192 CM5 sing 140 n n O20 H20 CM5 sing 141 n n C16 O23 CM5 sing 142 n n C16 H16 CM5 sing 143 n n O23 C24 CM5 sing 144 n n C24 O25 CM5 sing 145 n n C24 C29 CM5 sing 146 n n C24 H24 CM5 sing 147 n n O25 C26 CM5 sing 148 n n C26 C30 CM5 sing 149 n n C26 C27 CM5 sing 150 n n C26 H26 CM5 sing 151 n n C30 O31 CM5 sing 152 n n C30 H301 CM5 sing 153 n n C30 H302 CM5 sing 154 n n O31 H31 CM5 sing 155 n n C27 O32 CM5 sing 156 n n C27 C28 CM5 sing 157 n n C27 H27 CM5 sing 158 n n O32 H32 CM5 sing 159 n n C28 O33 CM5 sing 160 n n C28 C29 CM5 sing 161 n n C28 H28 CM5 sing 162 n n O33 H33 CM5 sing 163 n n C29 O34 CM5 sing 164 n n C29 H29 CM5 sing 165 n n O34 H34 CM5 sing 166 n n # _atom_sites.entry_id 4AIN _atom_sites.fract_transf_matrix[1][1] 0.008864 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007803 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 NA B 1 1558 1558 NA NA . E 3 BET B 1 1559 1559 BET BET . F 4 PEG B 1 1560 1560 PEG PEG . G 5 CL B 1 1561 1561 CL CL . H 5 CL C 1 1554 1554 CL CL . I 5 CL C 1 1555 1555 CL CL . J 3 BET C 1 1556 1556 BET BET . K 5 CL C 1 1557 1557 CL CL . L 6 FLC C 1 1558 1558 FLC FLC . M 7 CM5 C 1 1559 1559 CM5 CM5 . N 8 HOH A 1 2001 2001 HOH HOH . O 8 HOH B 1 2001 2001 HOH HOH . O 8 HOH B 2 2002 2002 HOH HOH . O 8 HOH B 3 2003 2003 HOH HOH . O 8 HOH B 4 2004 2004 HOH HOH . O 8 HOH B 5 2005 2005 HOH HOH . P 8 HOH C 1 2001 2001 HOH HOH . P 8 HOH C 2 2002 2002 HOH HOH . P 8 HOH C 3 2003 2003 HOH HOH . P 8 HOH C 4 2004 2004 HOH HOH . P 8 HOH C 5 2005 2005 HOH HOH . P 8 HOH C 6 2006 2006 HOH HOH . P 8 HOH C 7 2007 2007 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 CM5 . . . M 7 48.19 34.653 -58.396 1 164.23 ? C7 CM5 1559 C 1 HETATM 2 C C8 CM5 . . . M 7 47.311 34.202 -59.556 1 162.63 ? C8 CM5 1559 C 1 HETATM 3 C C9 CM5 . . . M 7 46.652 32.865 -59.238 1 162.18 ? C9 CM5 1559 C 1 HETATM 4 C C10 CM5 . . . M 7 45.853 32.959 -57.942 1 162.69 ? C10 CM5 1559 C 1 HETATM 5 C C11 CM5 . . . M 7 46.729 33.427 -56.786 1 163.5 ? C11 CM5 1559 C 1 HETATM 6 C C6 CM5 . . . M 7 47.396 34.763 -57.098 1 164.93 ? C6 CM5 1559 C 1 HETATM 7 C C5 CM5 . . . M 7 48.347 35.131 -55.963 1 167.53 ? C5 CM5 1559 C 1 HETATM 8 C C4 CM5 . . . M 7 47.638 35.832 -54.808 1 171.14 ? C4 CM5 1559 C 1 HETATM 9 C C3 CM5 . . . M 7 47.663 37.347 -54.978 1 175.74 ? C3 CM5 1559 C 1 HETATM 10 C C2 CM5 . . . M 7 46.46 37.834 -55.777 1 180.51 ? C2 CM5 1559 C 1 HETATM 11 C C1 CM5 . . . M 7 45.181 37.368 -55.096 1 185.1 ? C1 CM5 1559 C 1 HETATM 12 O O12 CM5 . . . M 7 44.177 37.074 -56.064 1 189.84 ? O12 CM5 1559 C 1 HETATM 13 C C13 CM5 . . . M 7 43.517 35.84 -55.774 1 195.1 ? C13 CM5 1559 C 1 HETATM 14 C C18 CM5 . . . M 7 43.585 35.594 -54.266 1 196.76 ? C18 CM5 1559 C 1 HETATM 15 O O22 CM5 . . . M 7 44.659 34.681 -53.999 1 196.3 ? O22 CM5 1559 C 1 HETATM 16 C C17 CM5 . . . M 7 42.286 35.015 -53.725 1 198.32 ? C17 CM5 1559 C 1 HETATM 17 O O21 CM5 . . . M 7 41.353 36.071 -53.473 1 197.35 ? O21 CM5 1559 C 1 HETATM 18 O O14 CM5 . . . M 7 42.175 35.914 -56.267 1 197.27 ? O14 CM5 1559 C 1 HETATM 19 C C15 CM5 . . . M 7 41.337 34.775 -56.022 1 197.76 ? C15 CM5 1559 C 1 HETATM 20 C C19 CM5 . . . M 7 39.881 35.229 -55.985 1 194.93 ? C19 CM5 1559 C 1 HETATM 21 O O20 CM5 . . . M 7 39.042 34.1 -55.726 1 192.9 ? O20 CM5 1559 C 1 HETATM 22 C C16 CM5 . . . M 7 41.698 34.041 -54.733 1 200.34 ? C16 CM5 1559 C 1 HETATM 23 O O23 CM5 . . . M 7 42.633 32.994 -54.991 1 203.4 ? O23 CM5 1559 C 1 HETATM 24 C C24 CM5 . . . M 7 42.727 32.104 -53.878 1 204.24 ? C24 CM5 1559 C 1 HETATM 25 O O25 CM5 . . . M 7 41.415 31.609 -53.581 1 205.08 ? O25 CM5 1559 C 1 HETATM 26 C C26 CM5 . . . M 7 41.326 30.56 -52.608 1 203.68 ? C26 CM5 1559 C 1 HETATM 27 C C30 CM5 . . . M 7 41.525 31.151 -51.214 1 203.4 ? C30 CM5 1559 C 1 HETATM 28 O O31 CM5 . . . M 7 41.055 30.219 -50.234 1 203 ? O31 CM5 1559 C 1 HETATM 29 C C27 CM5 . . . M 7 42.307 29.418 -52.874 1 201.24 ? C27 CM5 1559 C 1 HETATM 30 O O32 CM5 . . . M 7 41.854 28.664 -54.004 1 198.35 ? O32 CM5 1559 C 1 HETATM 31 C C28 CM5 . . . M 7 43.723 29.921 -53.123 1 201.32 ? C28 CM5 1559 C 1 HETATM 32 O O33 CM5 . . . M 7 44.287 30.462 -51.92 1 200.32 ? O33 CM5 1559 C 1 HETATM 33 C C29 CM5 . . . M 7 43.714 30.988 -54.207 1 202.52 ? C29 CM5 1559 C 1 HETATM 34 O O34 CM5 . . . M 7 43.363 30.402 -55.466 1 202.21 ? O34 CM5 1559 C 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 34 #