data_4AJM # _model_server_result.job_id jm5865sDuGOTCgu87QQYAQ _model_server_result.datetime_utc '2024-11-22 19:52:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ajm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1403}' # _entry.id 4AJM # _exptl.entry_id 4AJM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4AJM _cell.length_a 49.986 _cell.length_b 81.694 _cell.length_c 164.764 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AJM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 83 A HIS 529 1_555 C ZN ZN . A ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc2 A NE2 HIS 117 A HIS 563 1_555 C ZN ZN . A ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc3 A OD2 ASP 118 A ASP 564 1_555 C ZN ZN . A ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc4 A OD1 ASP 118 A ASP 564 1_555 D MG MG . A MG 1403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc5 A OD1 ASP 228 A ASP 674 1_555 C ZN ZN . A ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc6 C ZN ZN . A ZN 1402 1_555 H O HOH . A HOH 2029 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc7 D MG MG . A MG 1403 1_555 H O HOH . A HOH 2024 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc8 D MG MG . A MG 1403 1_555 H O HOH . A HOH 2028 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc9 D MG MG . A MG 1403 1_555 H O HOH . A HOH 2029 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? metalc ? metalc10 D MG MG . A MG 1403 1_555 H O HOH . A HOH 2030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? metalc ? metalc11 D MG MG . A MG 1403 1_555 H O HOH . A HOH 2034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc12 B NE2 HIS 83 D HIS 529 1_555 E ZN ZN . D ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc13 B NE2 HIS 117 D HIS 563 1_555 E ZN ZN . D ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc14 B OD2 ASP 118 D ASP 564 1_555 E ZN ZN . D ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc15 B OD1 ASP 118 D ASP 564 1_555 F MG MG . D MG 1403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc16 B OD1 ASP 228 D ASP 674 1_555 E ZN ZN . D ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc17 E ZN ZN . D ZN 1402 1_555 I O HOH . D HOH 2026 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc18 F MG MG . D MG 1403 1_555 I O HOH . D HOH 2022 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc19 F MG MG . D MG 1403 1_555 I O HOH . D HOH 2025 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? metalc ? metalc20 F MG MG . D MG 1403 1_555 I O HOH . D HOH 2026 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc21 F MG MG . D MG 1403 1_555 I O HOH . D HOH 2027 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc22 F MG MG . D MG 1403 1_555 I O HOH . D HOH 2033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4AJM _atom_sites.fract_transf_matrix[1][1] 0.020006 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012241 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006069 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1402 1402 ZN ZN . D 3 MG A 1 1403 1403 MG MG . E 2 ZN D 1 1402 1402 ZN ZN . F 3 MG D 1 1403 1403 MG MG . G 4 3A6 D 1 1769 1769 3A6 3A6 . H 5 HOH A 1 2001 2001 HOH HOH . H 5 HOH A 2 2002 2002 HOH HOH . H 5 HOH A 3 2003 2003 HOH HOH . H 5 HOH A 4 2004 2004 HOH HOH . H 5 HOH A 5 2005 2005 HOH HOH . H 5 HOH A 6 2006 2006 HOH HOH . H 5 HOH A 7 2007 2007 HOH HOH . H 5 HOH A 8 2008 2008 HOH HOH . H 5 HOH A 9 2009 2009 HOH HOH . H 5 HOH A 10 2010 2010 HOH HOH . H 5 HOH A 11 2011 2011 HOH HOH . H 5 HOH A 12 2012 2012 HOH HOH . H 5 HOH A 13 2013 2013 HOH HOH . H 5 HOH A 14 2014 2014 HOH HOH . H 5 HOH A 15 2015 2015 HOH HOH . H 5 HOH A 16 2016 2016 HOH HOH . H 5 HOH A 17 2017 2017 HOH HOH . H 5 HOH A 18 2018 2018 HOH HOH . H 5 HOH A 19 2019 2019 HOH HOH . H 5 HOH A 20 2020 2020 HOH HOH . H 5 HOH A 21 2021 2021 HOH HOH . H 5 HOH A 22 2022 2022 HOH HOH . H 5 HOH A 23 2023 2023 HOH HOH . H 5 HOH A 24 2024 2024 HOH HOH . H 5 HOH A 25 2025 2025 HOH HOH . H 5 HOH A 26 2026 2026 HOH HOH . H 5 HOH A 27 2027 2027 HOH HOH . H 5 HOH A 28 2028 2028 HOH HOH . H 5 HOH A 29 2029 2029 HOH HOH . H 5 HOH A 30 2030 2030 HOH HOH . H 5 HOH A 31 2031 2031 HOH HOH . H 5 HOH A 32 2032 2032 HOH HOH . H 5 HOH A 33 2033 2033 HOH HOH . H 5 HOH A 34 2034 2034 HOH HOH . H 5 HOH A 35 2035 2035 HOH HOH . H 5 HOH A 36 2036 2036 HOH HOH . H 5 HOH A 37 2037 2037 HOH HOH . H 5 HOH A 38 2038 2038 HOH HOH . H 5 HOH A 39 2039 2039 HOH HOH . H 5 HOH A 40 2040 2040 HOH HOH . H 5 HOH A 41 2041 2041 HOH HOH . H 5 HOH A 42 2042 2042 HOH HOH . H 5 HOH A 43 2043 2043 HOH HOH . H 5 HOH A 44 2044 2044 HOH HOH . H 5 HOH A 45 2045 2045 HOH HOH . H 5 HOH A 46 2046 2046 HOH HOH . H 5 HOH A 47 2047 2047 HOH HOH . H 5 HOH A 48 2048 2048 HOH HOH . H 5 HOH A 49 2049 2049 HOH HOH . I 5 HOH D 1 2001 2001 HOH HOH . I 5 HOH D 2 2002 2002 HOH HOH . I 5 HOH D 3 2003 2003 HOH HOH . I 5 HOH D 4 2004 2004 HOH HOH . I 5 HOH D 5 2005 2005 HOH HOH . I 5 HOH D 6 2006 2006 HOH HOH . I 5 HOH D 7 2007 2007 HOH HOH . I 5 HOH D 8 2008 2008 HOH HOH . I 5 HOH D 9 2009 2009 HOH HOH . I 5 HOH D 10 2010 2010 HOH HOH . I 5 HOH D 11 2011 2011 HOH HOH . I 5 HOH D 12 2012 2012 HOH HOH . I 5 HOH D 13 2013 2013 HOH HOH . I 5 HOH D 14 2014 2014 HOH HOH . I 5 HOH D 15 2015 2015 HOH HOH . I 5 HOH D 16 2016 2016 HOH HOH . I 5 HOH D 17 2017 2017 HOH HOH . I 5 HOH D 18 2018 2018 HOH HOH . I 5 HOH D 19 2019 2019 HOH HOH . I 5 HOH D 20 2020 2020 HOH HOH . I 5 HOH D 21 2021 2021 HOH HOH . I 5 HOH D 22 2022 2022 HOH HOH . I 5 HOH D 23 2023 2023 HOH HOH . I 5 HOH D 24 2024 2024 HOH HOH . I 5 HOH D 25 2025 2025 HOH HOH . I 5 HOH D 26 2026 2026 HOH HOH . I 5 HOH D 27 2027 2027 HOH HOH . I 5 HOH D 28 2028 2028 HOH HOH . I 5 HOH D 29 2029 2029 HOH HOH . I 5 HOH D 30 2030 2030 HOH HOH . I 5 HOH D 31 2031 2031 HOH HOH . I 5 HOH D 32 2032 2032 HOH HOH . I 5 HOH D 33 2033 2033 HOH HOH . I 5 HOH D 34 2034 2034 HOH HOH . I 5 HOH D 35 2035 2035 HOH HOH . I 5 HOH D 36 2036 2036 HOH HOH . I 5 HOH D 37 2037 2037 HOH HOH . I 5 HOH D 38 2038 2038 HOH HOH . I 5 HOH D 39 2039 2039 HOH HOH . I 5 HOH D 40 2040 2040 HOH HOH . I 5 HOH D 41 2041 2041 HOH HOH . I 5 HOH D 42 2042 2042 HOH HOH . I 5 HOH D 43 2043 2043 HOH HOH . I 5 HOH D 44 2044 2044 HOH HOH . I 5 HOH D 45 2045 2045 HOH HOH . I 5 HOH D 46 2046 2046 HOH HOH . I 5 HOH D 47 2047 2047 HOH HOH . I 5 HOH D 48 2048 2048 HOH HOH . I 5 HOH D 49 2049 2049 HOH HOH . I 5 HOH D 50 2050 2050 HOH HOH . I 5 HOH D 51 2051 2051 HOH HOH . I 5 HOH D 52 2052 2052 HOH HOH . I 5 HOH D 53 2053 2053 HOH HOH . I 5 HOH D 54 2054 2054 HOH HOH . I 5 HOH D 55 2055 2055 HOH HOH . I 5 HOH D 56 2056 2056 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 15.211 _atom_site.Cartn_y 5.476 _atom_site.Cartn_z 32.378 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.8 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #