data_4AKB # _model_server_result.job_id 5e9MjykZ0xPyo11twWuiSg _model_server_result.datetime_utc '2025-01-25 12:03:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4akb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1134}' # _entry.id 4AKB # _exptl.entry_id 4AKB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4AKB _cell.length_a 76.286 _cell.length_b 121.03 _cell.length_c 77.638 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AKB _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 248 n n O1 H1 P6G sing 249 n n C2 C3 P6G sing 250 n n C2 H21 P6G sing 251 n n C2 H22 P6G sing 252 n n C3 O4 P6G sing 253 n n C3 H31 P6G sing 254 n n C3 H32 P6G sing 255 n n O4 C5 P6G sing 256 n n C5 C6 P6G sing 257 n n C5 H51 P6G sing 258 n n C5 H52 P6G sing 259 n n C6 O7 P6G sing 260 n n C6 H61 P6G sing 261 n n C6 H62 P6G sing 262 n n O7 C8 P6G sing 263 n n C8 C9 P6G sing 264 n n C8 H81 P6G sing 265 n n C8 H82 P6G sing 266 n n C9 O10 P6G sing 267 n n C9 H91 P6G sing 268 n n C9 H92 P6G sing 269 n n O10 C11 P6G sing 270 n n C11 C12 P6G sing 271 n n C11 H111 P6G sing 272 n n C11 H112 P6G sing 273 n n C12 O13 P6G sing 274 n n C12 H121 P6G sing 275 n n C12 H122 P6G sing 276 n n O13 C14 P6G sing 277 n n C14 C15 P6G sing 278 n n C14 H141 P6G sing 279 n n C14 H142 P6G sing 280 n n C15 O16 P6G sing 281 n n C15 H151 P6G sing 282 n n C15 H152 P6G sing 283 n n O16 C17 P6G sing 284 n n C17 C18 P6G sing 285 n n C17 H171 P6G sing 286 n n C17 H172 P6G sing 287 n n C18 O19 P6G sing 288 n n C18 H181 P6G sing 289 n n C18 H182 P6G sing 290 n n O19 H19 P6G sing 291 n n # _atom_sites.entry_id 4AKB _atom_sites.fract_transf_matrix[1][1] 0.013109 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008262 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01288 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 P6G A 1 1134 1134 P6G P6G . J 4 GAL C 1 1134 1134 GAL GAL . K 4 GAL E 1 1134 1134 GAL GAL . L 4 GAL G 1 1134 1134 GAL GAL . M 5 HOH A 1 2001 2001 HOH HOH . M 5 HOH A 2 2002 2002 HOH HOH . M 5 HOH A 3 2003 2003 HOH HOH . M 5 HOH A 4 2004 2004 HOH HOH . M 5 HOH A 5 2005 2005 HOH HOH . M 5 HOH A 6 2006 2006 HOH HOH . M 5 HOH A 7 2007 2007 HOH HOH . M 5 HOH A 8 2008 2008 HOH HOH . M 5 HOH A 9 2009 2009 HOH HOH . M 5 HOH A 10 2010 2010 HOH HOH . M 5 HOH A 11 2011 2011 HOH HOH . M 5 HOH A 12 2012 2012 HOH HOH . M 5 HOH A 13 2013 2013 HOH HOH . M 5 HOH A 14 2014 2014 HOH HOH . M 5 HOH A 15 2015 2015 HOH HOH . M 5 HOH A 16 2016 2016 HOH HOH . M 5 HOH A 17 2017 2017 HOH HOH . M 5 HOH A 18 2018 2018 HOH HOH . M 5 HOH A 19 2019 2019 HOH HOH . M 5 HOH A 20 2020 2020 HOH HOH . M 5 HOH A 21 2021 2021 HOH HOH . M 5 HOH A 22 2022 2022 HOH HOH . M 5 HOH A 23 2023 2023 HOH HOH . M 5 HOH A 24 2024 2024 HOH HOH . M 5 HOH A 25 2025 2025 HOH HOH . M 5 HOH A 26 2026 2026 HOH HOH . M 5 HOH A 27 2027 2027 HOH HOH . M 5 HOH A 28 2028 2028 HOH HOH . M 5 HOH A 29 2029 2029 HOH HOH . M 5 HOH A 30 2030 2030 HOH HOH . M 5 HOH A 31 2031 2031 HOH HOH . M 5 HOH A 32 2032 2032 HOH HOH . M 5 HOH A 33 2033 2033 HOH HOH . M 5 HOH A 34 2034 2034 HOH HOH . M 5 HOH A 35 2035 2035 HOH HOH . M 5 HOH A 36 2036 2036 HOH HOH . M 5 HOH A 37 2037 2037 HOH HOH . M 5 HOH A 38 2038 2038 HOH HOH . M 5 HOH A 39 2039 2039 HOH HOH . M 5 HOH A 40 2040 2040 HOH HOH . M 5 HOH A 41 2041 2041 HOH HOH . M 5 HOH A 42 2042 2042 HOH HOH . M 5 HOH A 43 2043 2043 HOH HOH . M 5 HOH A 44 2044 2044 HOH HOH . M 5 HOH A 45 2045 2045 HOH HOH . M 5 HOH A 46 2046 2046 HOH HOH . M 5 HOH A 47 2047 2047 HOH HOH . M 5 HOH A 48 2048 2048 HOH HOH . M 5 HOH A 49 2049 2049 HOH HOH . M 5 HOH A 50 2050 2050 HOH HOH . M 5 HOH A 51 2051 2051 HOH HOH . M 5 HOH A 52 2052 2052 HOH HOH . M 5 HOH A 53 2053 2053 HOH HOH . M 5 HOH A 54 2054 2054 HOH HOH . M 5 HOH A 55 2055 2055 HOH HOH . M 5 HOH A 56 2056 2056 HOH HOH . M 5 HOH A 57 2057 2057 HOH HOH . M 5 HOH A 58 2058 2058 HOH HOH . M 5 HOH A 59 2059 2059 HOH HOH . M 5 HOH A 60 2060 2060 HOH HOH . M 5 HOH A 61 2061 2061 HOH HOH . M 5 HOH A 62 2062 2062 HOH HOH . M 5 HOH A 63 2063 2063 HOH HOH . M 5 HOH A 64 2064 2064 HOH HOH . M 5 HOH A 65 2065 2065 HOH HOH . M 5 HOH A 66 2066 2066 HOH HOH . M 5 HOH A 67 2067 2067 HOH HOH . M 5 HOH A 68 2068 2068 HOH HOH . M 5 HOH A 69 2069 2069 HOH HOH . N 5 HOH B 1 2001 2001 HOH HOH . N 5 HOH B 2 2002 2002 HOH HOH . N 5 HOH B 3 2003 2003 HOH HOH . N 5 HOH B 4 2004 2004 HOH HOH . N 5 HOH B 5 2005 2005 HOH HOH . N 5 HOH B 6 2006 2006 HOH HOH . N 5 HOH B 7 2007 2007 HOH HOH . N 5 HOH B 8 2008 2008 HOH HOH . O 5 HOH C 1 2001 2001 HOH HOH . O 5 HOH C 2 2002 2002 HOH HOH . O 5 HOH C 3 2003 2003 HOH HOH . O 5 HOH C 4 2004 2004 HOH HOH . O 5 HOH C 5 2005 2005 HOH HOH . O 5 HOH C 6 2006 2006 HOH HOH . O 5 HOH C 7 2007 2007 HOH HOH . O 5 HOH C 8 2008 2008 HOH HOH . O 5 HOH C 9 2009 2009 HOH HOH . O 5 HOH C 10 2010 2010 HOH HOH . O 5 HOH C 11 2011 2011 HOH HOH . O 5 HOH C 12 2012 2012 HOH HOH . O 5 HOH C 13 2013 2013 HOH HOH . O 5 HOH C 14 2014 2014 HOH HOH . O 5 HOH C 15 2015 2015 HOH HOH . O 5 HOH C 16 2016 2016 HOH HOH . O 5 HOH C 17 2017 2017 HOH HOH . O 5 HOH C 18 2018 2018 HOH HOH . O 5 HOH C 19 2019 2019 HOH HOH . O 5 HOH C 20 2020 2020 HOH HOH . O 5 HOH C 21 2021 2021 HOH HOH . O 5 HOH C 22 2022 2022 HOH HOH . O 5 HOH C 23 2023 2023 HOH HOH . O 5 HOH C 24 2024 2024 HOH HOH . O 5 HOH C 25 2025 2025 HOH HOH . O 5 HOH C 26 2026 2026 HOH HOH . O 5 HOH C 27 2027 2027 HOH HOH . O 5 HOH C 28 2028 2028 HOH HOH . O 5 HOH C 29 2029 2029 HOH HOH . O 5 HOH C 30 2030 2030 HOH HOH . O 5 HOH C 31 2031 2031 HOH HOH . O 5 HOH C 32 2032 2032 HOH HOH . O 5 HOH C 33 2033 2033 HOH HOH . O 5 HOH C 34 2034 2034 HOH HOH . O 5 HOH C 35 2035 2035 HOH HOH . O 5 HOH C 36 2036 2036 HOH HOH . O 5 HOH C 37 2037 2037 HOH HOH . O 5 HOH C 38 2038 2038 HOH HOH . O 5 HOH C 39 2039 2039 HOH HOH . O 5 HOH C 40 2040 2040 HOH HOH . O 5 HOH C 41 2041 2041 HOH HOH . O 5 HOH C 42 2042 2042 HOH HOH . O 5 HOH C 43 2043 2043 HOH HOH . O 5 HOH C 44 2044 2044 HOH HOH . O 5 HOH C 45 2045 2045 HOH HOH . O 5 HOH C 46 2046 2046 HOH HOH . O 5 HOH C 47 2047 2047 HOH HOH . O 5 HOH C 48 2048 2048 HOH HOH . O 5 HOH C 49 2049 2049 HOH HOH . O 5 HOH C 50 2050 2050 HOH HOH . P 5 HOH D 1 2001 2001 HOH HOH . P 5 HOH D 2 2002 2002 HOH HOH . P 5 HOH D 3 2003 2003 HOH HOH . P 5 HOH D 4 2004 2004 HOH HOH . P 5 HOH D 5 2005 2005 HOH HOH . P 5 HOH D 6 2006 2006 HOH HOH . Q 5 HOH E 1 2001 2001 HOH HOH . Q 5 HOH E 2 2002 2002 HOH HOH . Q 5 HOH E 3 2003 2003 HOH HOH . Q 5 HOH E 4 2004 2004 HOH HOH . Q 5 HOH E 5 2005 2005 HOH HOH . Q 5 HOH E 6 2006 2006 HOH HOH . Q 5 HOH E 7 2007 2007 HOH HOH . Q 5 HOH E 8 2008 2008 HOH HOH . Q 5 HOH E 9 2009 2009 HOH HOH . Q 5 HOH E 10 2010 2010 HOH HOH . Q 5 HOH E 11 2011 2011 HOH HOH . Q 5 HOH E 12 2012 2012 HOH HOH . Q 5 HOH E 13 2013 2013 HOH HOH . Q 5 HOH E 14 2014 2014 HOH HOH . Q 5 HOH E 15 2015 2015 HOH HOH . Q 5 HOH E 16 2016 2016 HOH HOH . Q 5 HOH E 17 2017 2017 HOH HOH . Q 5 HOH E 18 2018 2018 HOH HOH . Q 5 HOH E 19 2019 2019 HOH HOH . Q 5 HOH E 20 2020 2020 HOH HOH . Q 5 HOH E 21 2021 2021 HOH HOH . Q 5 HOH E 22 2022 2022 HOH HOH . Q 5 HOH E 23 2023 2023 HOH HOH . Q 5 HOH E 24 2024 2024 HOH HOH . Q 5 HOH E 25 2025 2025 HOH HOH . Q 5 HOH E 26 2026 2026 HOH HOH . Q 5 HOH E 27 2027 2027 HOH HOH . Q 5 HOH E 28 2028 2028 HOH HOH . Q 5 HOH E 29 2029 2029 HOH HOH . Q 5 HOH E 30 2030 2030 HOH HOH . Q 5 HOH E 31 2031 2031 HOH HOH . Q 5 HOH E 32 2032 2032 HOH HOH . Q 5 HOH E 33 2033 2033 HOH HOH . Q 5 HOH E 34 2034 2034 HOH HOH . Q 5 HOH E 35 2035 2035 HOH HOH . Q 5 HOH E 36 2036 2036 HOH HOH . Q 5 HOH E 37 2037 2037 HOH HOH . Q 5 HOH E 38 2038 2038 HOH HOH . Q 5 HOH E 39 2039 2039 HOH HOH . Q 5 HOH E 40 2040 2040 HOH HOH . Q 5 HOH E 41 2041 2041 HOH HOH . Q 5 HOH E 42 2042 2042 HOH HOH . Q 5 HOH E 43 2043 2043 HOH HOH . Q 5 HOH E 44 2044 2044 HOH HOH . Q 5 HOH E 45 2045 2045 HOH HOH . Q 5 HOH E 46 2046 2046 HOH HOH . Q 5 HOH E 47 2047 2047 HOH HOH . Q 5 HOH E 48 2048 2048 HOH HOH . Q 5 HOH E 49 2049 2049 HOH HOH . Q 5 HOH E 50 2050 2050 HOH HOH . Q 5 HOH E 51 2051 2051 HOH HOH . Q 5 HOH E 52 2052 2052 HOH HOH . Q 5 HOH E 53 2053 2053 HOH HOH . Q 5 HOH E 54 2054 2054 HOH HOH . Q 5 HOH E 55 2055 2055 HOH HOH . Q 5 HOH E 56 2056 2056 HOH HOH . Q 5 HOH E 57 2057 2057 HOH HOH . Q 5 HOH E 58 2058 2058 HOH HOH . Q 5 HOH E 59 2059 2059 HOH HOH . Q 5 HOH E 60 2060 2060 HOH HOH . Q 5 HOH E 61 2061 2061 HOH HOH . Q 5 HOH E 62 2062 2062 HOH HOH . Q 5 HOH E 63 2063 2063 HOH HOH . Q 5 HOH E 64 2064 2064 HOH HOH . Q 5 HOH E 65 2065 2065 HOH HOH . Q 5 HOH E 66 2066 2066 HOH HOH . Q 5 HOH E 67 2067 2067 HOH HOH . Q 5 HOH E 68 2068 2068 HOH HOH . Q 5 HOH E 69 2069 2069 HOH HOH . Q 5 HOH E 70 2070 2070 HOH HOH . Q 5 HOH E 71 2071 2071 HOH HOH . Q 5 HOH E 72 2072 2072 HOH HOH . Q 5 HOH E 73 2073 2073 HOH HOH . Q 5 HOH E 74 2074 2074 HOH HOH . Q 5 HOH E 75 2075 2075 HOH HOH . Q 5 HOH E 76 2076 2076 HOH HOH . Q 5 HOH E 77 2077 2077 HOH HOH . Q 5 HOH E 78 2078 2078 HOH HOH . Q 5 HOH E 79 2079 2079 HOH HOH . R 5 HOH F 1 2001 2001 HOH HOH . R 5 HOH F 2 2002 2002 HOH HOH . R 5 HOH F 3 2003 2003 HOH HOH . R 5 HOH F 4 2004 2004 HOH HOH . R 5 HOH F 5 2005 2005 HOH HOH . R 5 HOH F 6 2006 2006 HOH HOH . R 5 HOH F 7 2007 2007 HOH HOH . R 5 HOH F 8 2008 2008 HOH HOH . R 5 HOH F 9 2009 2009 HOH HOH . R 5 HOH F 10 2010 2010 HOH HOH . R 5 HOH F 11 2011 2011 HOH HOH . S 5 HOH G 1 2001 2001 HOH HOH . S 5 HOH G 2 2002 2002 HOH HOH . S 5 HOH G 3 2003 2003 HOH HOH . S 5 HOH G 4 2004 2004 HOH HOH . S 5 HOH G 5 2005 2005 HOH HOH . S 5 HOH G 6 2006 2006 HOH HOH . S 5 HOH G 7 2007 2007 HOH HOH . S 5 HOH G 8 2008 2008 HOH HOH . S 5 HOH G 9 2009 2009 HOH HOH . S 5 HOH G 10 2010 2010 HOH HOH . S 5 HOH G 11 2011 2011 HOH HOH . S 5 HOH G 12 2012 2012 HOH HOH . S 5 HOH G 13 2013 2013 HOH HOH . S 5 HOH G 14 2014 2014 HOH HOH . S 5 HOH G 15 2015 2015 HOH HOH . S 5 HOH G 16 2016 2016 HOH HOH . S 5 HOH G 17 2017 2017 HOH HOH . S 5 HOH G 18 2018 2018 HOH HOH . S 5 HOH G 19 2019 2019 HOH HOH . S 5 HOH G 20 2020 2020 HOH HOH . S 5 HOH G 21 2021 2021 HOH HOH . S 5 HOH G 22 2022 2022 HOH HOH . S 5 HOH G 23 2023 2023 HOH HOH . S 5 HOH G 24 2024 2024 HOH HOH . S 5 HOH G 25 2025 2025 HOH HOH . S 5 HOH G 26 2026 2026 HOH HOH . S 5 HOH G 27 2027 2027 HOH HOH . S 5 HOH G 28 2028 2028 HOH HOH . S 5 HOH G 29 2029 2029 HOH HOH . S 5 HOH G 30 2030 2030 HOH HOH . S 5 HOH G 31 2031 2031 HOH HOH . S 5 HOH G 32 2032 2032 HOH HOH . S 5 HOH G 33 2033 2033 HOH HOH . S 5 HOH G 34 2034 2034 HOH HOH . S 5 HOH G 35 2035 2035 HOH HOH . S 5 HOH G 36 2036 2036 HOH HOH . S 5 HOH G 37 2037 2037 HOH HOH . T 5 HOH H 1 2001 2001 HOH HOH . T 5 HOH H 2 2002 2002 HOH HOH . T 5 HOH H 3 2003 2003 HOH HOH . T 5 HOH H 4 2004 2004 HOH HOH . T 5 HOH H 5 2005 2005 HOH HOH . T 5 HOH H 6 2006 2006 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 P6G . . . I 3 18.223 67.077 24.45 1 52.04 ? C2 P6G 1134 A 1 HETATM 2 C C3 P6G . . . I 3 19.635 66.521 24.415 1 52.5 ? C3 P6G 1134 A 1 HETATM 3 O O4 P6G . . . I 3 19.743 65.389 25.287 1 52.14 ? O4 P6G 1134 A 1 HETATM 4 C C5 P6G . . . I 3 20.736 65.573 26.292 1 48.13 ? C5 P6G 1134 A 1 HETATM 5 C C6 P6G . . . I 3 20.677 64.379 27.23 1 45.17 ? C6 P6G 1134 A 1 HETATM 6 O O7 P6G . . . I 3 21.444 63.316 26.667 1 42.96 ? O7 P6G 1134 A 1 HETATM 7 C C8 P6G . . . I 3 21.112 62.103 27.336 1 42.37 ? C8 P6G 1134 A 1 HETATM 8 C C9 P6G . . . I 3 22.156 61.051 27.024 1 35.41 ? C9 P6G 1134 A 1 HETATM 9 O O10 P6G . . . I 3 21.881 60.562 25.715 1 32.18 ? O10 P6G 1134 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 9 #