data_4AL1 # _model_server_result.job_id UHnejc-vsLXfTw4kUmwboQ _model_server_result.datetime_utc '2025-02-17 15:06:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4al1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1153}' # _entry.id 4AL1 # _exptl.entry_id 4AL1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 501.552 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description L-gamma-glutamyl-S-(2-biphenyl-4-yl-2-oxoethyl)-L-cysteinylglycine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4AL1 _cell.length_a 76.623 _cell.length_b 76.623 _cell.length_c 123.349 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AL1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H27 N3 O7 S' _chem_comp.formula_weight 501.552 _chem_comp.id 48T _chem_comp.mon_nstd_flag . _chem_comp.name L-gamma-glutamyl-S-(2-biphenyl-4-yl-2-oxoethyl)-L-cysteinylglycine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 48T sing 1 n n CA1 C1 48T sing 2 n n CA1 CB1 48T sing 3 n n C1 O11 48T sing 4 n n C1 O12 48T doub 5 n n CB1 CG1 48T sing 6 n n CG1 CD1 48T sing 7 n n CD1 OE1 48T doub 8 n n CD1 N2 48T sing 9 n n N2 CA2 48T sing 10 n n CA2 C2 48T sing 11 n n CA2 CB2 48T sing 12 n n C2 O2 48T doub 13 n n C2 N3 48T sing 14 n n CB2 SG2 48T sing 15 n n SG2 C13 48T sing 16 n n CB4 CG4 48T doub 17 n y CB4 CH4 48T sing 18 n y CG4 CD4 48T sing 19 n y CD4 CE4 48T doub 20 n y CE4 CZ4 48T sing 21 n y CZ4 CH4 48T doub 22 n y CH4 CH5 48T sing 23 n n CH5 CZ5 48T doub 24 n y CH5 CB5 48T sing 25 n y CZ5 CE5 48T sing 26 n y CE5 CD5 48T doub 27 n y CD5 CG5 48T sing 28 n y CD5 C14 48T sing 29 n n CG5 CB5 48T doub 30 n y O5 C14 48T doub 31 n n N3 CA3 48T sing 32 n n CA3 C3 48T sing 33 n n C3 O31 48T doub 34 n n C3 O32 48T sing 35 n n C13 C14 48T sing 36 n n N1 H11N 48T sing 37 n n N1 H12N 48T sing 38 n n CA1 HA1 48T sing 39 n n CB1 HB11 48T sing 40 n n CB1 HB12 48T sing 41 n n O11 H11 48T sing 42 n n CG1 HG11 48T sing 43 n n CG1 HG12 48T sing 44 n n N2 H2 48T sing 45 n n CA2 HA2 48T sing 46 n n CB2 HB21 48T sing 47 n n CB2 HB22 48T sing 48 n n N3 H3 48T sing 49 n n C13 H131 48T sing 50 n n C13 H132 48T sing 51 n n CB4 HB4 48T sing 52 n n CG4 HG4 48T sing 53 n n CD4 HD4 48T sing 54 n n CE4 HE4 48T sing 55 n n CZ4 HZ4 48T sing 56 n n CZ5 HZ5 48T sing 57 n n CB5 HB5 48T sing 58 n n CE5 HE5 48T sing 59 n n CG5 HG5 48T sing 60 n n CA3 HA31 48T sing 61 n n CA3 HA32 48T sing 62 n n O32 H32 48T sing 63 n n # _atom_sites.entry_id 4AL1 _atom_sites.fract_transf_matrix[1][1] 0.013051 _atom_sites.fract_transf_matrix[1][2] 0.007535 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01507 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008107 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG A 1 201 201 BOG BOG . C 3 PLM A 1 202 202 PLM PLM . D 3 PLM A 1 203 203 PLM PLM . E 4 SO4 A 1 204 204 SO4 SO4 . F 5 48T A 1 1153 1153 48T 48T . G 6 HOH A 1 2001 2001 HOH HOH . G 6 HOH A 2 2002 2002 HOH HOH . G 6 HOH A 3 2003 2003 HOH HOH . G 6 HOH A 4 2004 2004 HOH HOH . G 6 HOH A 5 2005 2005 HOH HOH . G 6 HOH A 6 2006 2006 HOH HOH . G 6 HOH A 7 2007 2007 HOH HOH . G 6 HOH A 8 2008 2008 HOH HOH . G 6 HOH A 9 2009 2009 HOH HOH . G 6 HOH A 10 2010 2010 HOH HOH . G 6 HOH A 11 2011 2011 HOH HOH . G 6 HOH A 12 2012 2012 HOH HOH . G 6 HOH A 13 2013 2013 HOH HOH . G 6 HOH A 14 2014 2014 HOH HOH . G 6 HOH A 15 2015 2015 HOH HOH . G 6 HOH A 16 2016 2016 HOH HOH . G 6 HOH A 17 2017 2017 HOH HOH . G 6 HOH A 18 2018 2018 HOH HOH . G 6 HOH A 19 2019 2019 HOH HOH . G 6 HOH A 20 2020 2020 HOH HOH . G 6 HOH A 21 2021 2021 HOH HOH . G 6 HOH A 22 2022 2022 HOH HOH . G 6 HOH A 23 2023 2023 HOH HOH . G 6 HOH A 24 2024 2024 HOH HOH . G 6 HOH A 25 2025 2025 HOH HOH . G 6 HOH A 26 2026 2026 HOH HOH . G 6 HOH A 27 2027 2027 HOH HOH . G 6 HOH A 28 2028 2028 HOH HOH . G 6 HOH A 29 2029 2029 HOH HOH . G 6 HOH A 30 2030 2030 HOH HOH . G 6 HOH A 31 2031 2031 HOH HOH . G 6 HOH A 32 2032 2032 HOH HOH . G 6 HOH A 33 2033 2033 HOH HOH . G 6 HOH A 34 2034 2034 HOH HOH . G 6 HOH A 35 2035 2035 HOH HOH . G 6 HOH A 36 2036 2036 HOH HOH . G 6 HOH A 37 2037 2037 HOH HOH . G 6 HOH A 38 2038 2038 HOH HOH . G 6 HOH A 39 2039 2039 HOH HOH . G 6 HOH A 40 2040 2040 HOH HOH . G 6 HOH A 41 2041 2041 HOH HOH . G 6 HOH A 42 2042 2042 HOH HOH . G 6 HOH A 43 2043 2043 HOH HOH . G 6 HOH A 44 2044 2044 HOH HOH . G 6 HOH A 45 2045 2045 HOH HOH . G 6 HOH A 46 2046 2046 HOH HOH . G 6 HOH A 47 2047 2047 HOH HOH . G 6 HOH A 48 2048 2048 HOH HOH . G 6 HOH A 49 2049 2049 HOH HOH . G 6 HOH A 50 2050 2050 HOH HOH . G 6 HOH A 51 2051 2051 HOH HOH . G 6 HOH A 52 2052 2052 HOH HOH . G 6 HOH A 53 2053 2053 HOH HOH . G 6 HOH A 54 2054 2054 HOH HOH . G 6 HOH A 55 2055 2055 HOH HOH . G 6 HOH A 56 2056 2056 HOH HOH . G 6 HOH A 57 2057 2057 HOH HOH . G 6 HOH A 58 2058 2058 HOH HOH . G 6 HOH A 59 2059 2059 HOH HOH . G 6 HOH A 60 2060 2060 HOH HOH . G 6 HOH A 61 2061 2061 HOH HOH . G 6 HOH A 62 2062 2062 HOH HOH . G 6 HOH A 63 2063 2063 HOH HOH . G 6 HOH A 64 2064 2064 HOH HOH . G 6 HOH A 65 2065 2065 HOH HOH . G 6 HOH A 66 2066 2066 HOH HOH . G 6 HOH A 67 2067 2067 HOH HOH . G 6 HOH A 68 2068 2068 HOH HOH . G 6 HOH A 69 2069 2069 HOH HOH . G 6 HOH A 70 2070 2070 HOH HOH . G 6 HOH A 71 2071 2071 HOH HOH . G 6 HOH A 72 2072 2072 HOH HOH . G 6 HOH A 73 2073 2073 HOH HOH . G 6 HOH A 74 2074 2074 HOH HOH . G 6 HOH A 75 2075 2075 HOH HOH . G 6 HOH A 76 2076 2076 HOH HOH . G 6 HOH A 77 2077 2077 HOH HOH . G 6 HOH A 78 2078 2078 HOH HOH . G 6 HOH A 79 2079 2079 HOH HOH . G 6 HOH A 80 2080 2080 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 48T . . . F 5 4.242 -7.826 -8.264 1 9.8 ? N1 48T 1153 A 1 HETATM 2 C CA1 48T . . . F 5 5.482 -8.622 -8.34 1 11.56 ? CA1 48T 1153 A 1 HETATM 3 C C1 48T . . . F 5 5.854 -8.866 -9.793 1 12.81 ? C1 48T 1153 A 1 HETATM 4 O O11 48T . . . F 5 7.127 -9.138 -10.113 1 13.25 ? O11 48T 1153 A 1 HETATM 5 C CB1 48T . . . F 5 5.307 -9.909 -7.518 1 11.55 ? CB1 48T 1153 A 1 HETATM 6 C CG1 48T . . . F 5 6.518 -10.86 -7.556 1 11.59 ? CG1 48T 1153 A 1 HETATM 7 C CD1 48T . . . F 5 7.803 -10.187 -7.138 1 12.65 ? CD1 48T 1153 A 1 HETATM 8 O OE1 48T . . . F 5 7.768 -9.262 -6.342 1 11.36 ? OE1 48T 1153 A 1 HETATM 9 O O12 48T . . . F 5 5.021 -8.792 -10.674 1 14.6 ? O12 48T 1153 A 1 HETATM 10 N N2 48T . . . F 5 8.979 -10.626 -7.662 1 13.36 ? N2 48T 1153 A 1 HETATM 11 C CA2 48T . . . F 5 10.275 -10.025 -7.307 1 15.05 ? CA2 48T 1153 A 1 HETATM 12 C C2 48T . . . F 5 10.469 -8.689 -7.989 1 14.85 ? C2 48T 1153 A 1 HETATM 13 O O2 48T . . . F 5 11.428 -7.989 -7.693 1 14.46 ? O2 48T 1153 A 1 HETATM 14 C CB2 48T . . . F 5 11.408 -10.952 -7.769 1 15.38 ? CB2 48T 1153 A 1 HETATM 15 S SG2 48T . . . F 5 11.521 -12.362 -6.636 1 16.59 ? SG2 48T 1153 A 1 HETATM 16 C CZ4 48T . . . F 5 8.399 -15.834 -0.786 1 17.5 ? CZ4 48T 1153 A 1 HETATM 17 C CE4 48T . . . F 5 7.99 -15.933 0.536 1 17.92 ? CE4 48T 1153 A 1 HETATM 18 C CD4 48T . . . F 5 7.058 -15.047 1.053 1 17.33 ? CD4 48T 1153 A 1 HETATM 19 C CG4 48T . . . F 5 6.525 -14.048 0.253 1 18.39 ? CG4 48T 1153 A 1 HETATM 20 C CB4 48T . . . F 5 6.921 -13.937 -1.068 1 17.16 ? CB4 48T 1153 A 1 HETATM 21 C CH4 48T . . . F 5 7.856 -14.838 -1.603 1 16.31 ? CH4 48T 1153 A 1 HETATM 22 C CH5 48T . . . F 5 8.277 -14.67 -3.014 1 15.05 ? CH5 48T 1153 A 1 HETATM 23 C CB5 48T . . . F 5 9.613 -14.875 -3.388 1 13.63 ? CB5 48T 1153 A 1 HETATM 24 C CG5 48T . . . F 5 10 -14.687 -4.695 1 14.23 ? CG5 48T 1153 A 1 HETATM 25 C CD5 48T . . . F 5 9.058 -14.286 -5.665 1 14.9 ? CD5 48T 1153 A 1 HETATM 26 C CE5 48T . . . F 5 7.725 -14.07 -5.28 1 13.83 ? CE5 48T 1153 A 1 HETATM 27 C CZ5 48T . . . F 5 7.342 -14.258 -3.975 1 14.32 ? CZ5 48T 1153 A 1 HETATM 28 O O5 48T . . . F 5 8.584 -13.941 -7.928 1 17.79 ? O5 48T 1153 A 1 HETATM 29 N N3 48T . . . F 5 9.593 -8.283 -8.935 1 15.49 ? N3 48T 1153 A 1 HETATM 30 C CA3 48T . . . F 5 9.792 -7.002 -9.617 1 15.13 ? CA3 48T 1153 A 1 HETATM 31 C C3 48T . . . F 5 8.626 -6.062 -9.413 1 16.04 ? C3 48T 1153 A 1 HETATM 32 C C13 48T . . . F 5 10.882 -13.841 -7.471 1 16.68 ? C13 48T 1153 A 1 HETATM 33 O O31 48T . . . F 5 7.845 -6.185 -8.499 1 18.4 ? O31 48T 1153 A 1 HETATM 34 C C14 48T . . . F 5 9.44 -14.048 -7.071 1 16.36 ? C14 48T 1153 A 1 HETATM 35 O O32 48T . . . F 5 8.455 -5.058 -10.264 1 15.89 ? O32 48T 1153 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 35 #