data_4ALD # _model_server_result.job_id jFr0-fuAWNHPDZJC_ZvU-w _model_server_result.datetime_utc '2024-11-19 07:14:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ald # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":364}' # _entry.id 4ALD # _exptl.entry_id 4ALD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.116 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description '1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4ALD _cell.length_a 96.5 _cell.length_b 96.5 _cell.length_c 166.9 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ALD _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 -48.25 83.571451 0 3 'crystal symmetry operation' 9_555 -x,-x+y,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 111.266667 4 'crystal symmetry operation' 12_565 x,x-y+1,-z+2/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -48.25 83.571451 111.266667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O12 P2' _chem_comp.formula_weight 340.116 _chem_comp.id 2FP _chem_comp.mon_nstd_flag . _chem_comp.name '1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM)' _chem_comp.type saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P6 O6 2FP sing 1 n n P6 O61 2FP sing 2 n n P6 O62 2FP sing 3 n n P6 O63 2FP doub 4 n n O6 C6 2FP sing 5 n n C6 C5 2FP sing 6 n n C6 H61 2FP sing 7 n n C6 H62 2FP sing 8 n n C5 O5 2FP sing 9 n n C5 C4 2FP sing 10 n n C5 H5 2FP sing 11 n n O5 HO5 2FP sing 12 n n C4 O4 2FP sing 13 n n C4 C3 2FP sing 14 n n C4 H4 2FP sing 15 n n O4 HO4 2FP sing 16 n n C3 O3 2FP sing 17 n n C3 C2 2FP sing 18 n n C3 H3 2FP sing 19 n n O3 HO3 2FP sing 20 n n C2 O2 2FP doub 21 n n C2 C1 2FP sing 22 n n C1 O1 2FP sing 23 n n C1 H11 2FP sing 24 n n C1 H12A 2FP sing 25 n n O1 P1 2FP sing 26 n n O61 HO61 2FP sing 27 n n O62 HO62 2FP sing 28 n n P1 O11 2FP doub 29 n n P1 O12 2FP sing 30 n n P1 O13 2FP sing 31 n n O12 H12 2FP sing 32 n n O13 H13 2FP sing 33 n n # _atom_sites.entry_id 4ALD _atom_sites.fract_transf_matrix[1][1] 0.010363 _atom_sites.fract_transf_matrix[1][2] 0.005983 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011966 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005992 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 2FP _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 364 _pdbx_nonpoly_scheme.auth_seq_num 364 _pdbx_nonpoly_scheme.pdb_mon_id 2FP _pdbx_nonpoly_scheme.auth_mon_id 2FP _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P6 2FP . . . B 2 -0.256 25.106 43.195 1 12.99 ? P6 2FP 364 A 1 HETATM 2 O O6 2FP . . . B 2 -1.405 26.334 43.437 1 12.99 ? O6 2FP 364 A 1 HETATM 3 C C6 2FP . . . B 2 -0.933 27.557 42.736 1 12.99 ? C6 2FP 364 A 1 HETATM 4 C C5 2FP . . . B 2 0.241 28.231 43.625 1 12.99 ? C5 2FP 364 A 1 HETATM 5 O O5 2FP . . . B 2 1.839 28.044 43.143 1 12.99 ? O5 2FP 364 A 1 HETATM 6 C C4 2FP . . . B 2 -0.113 29.74 44.08 1 12.99 ? C4 2FP 364 A 1 HETATM 7 O O4 2FP . . . B 2 -1.266 29.749 43.125 1 12.99 ? O4 2FP 364 A 1 HETATM 8 C C3 2FP . . . B 2 0.523 31.124 43.722 1 12.99 ? C3 2FP 364 A 1 HETATM 9 O O3 2FP . . . B 2 -0.359 32.417 43.984 1 12.99 ? O3 2FP 364 A 1 HETATM 10 C C2 2FP . . . B 2 1.879 31.821 44.031 1 12.99 ? C2 2FP 364 A 1 HETATM 11 O O2 2FP . . . B 2 2.339 31.762 45.508 1 12.99 ? O2 2FP 364 A 1 HETATM 12 C C1 2FP . . . B 2 2.46 32.741 43.096 1 12.99 ? C1 2FP 364 A 1 HETATM 13 O O1 2FP . . . B 2 2.695 32.885 41.796 1 12.99 ? O1 2FP 364 A 1 HETATM 14 O O61 2FP . . . B 2 1.038 24.601 44.036 1 12.99 ? O61 2FP 364 A 1 HETATM 15 O O62 2FP . . . B 2 0.49 25.378 41.653 1 12.99 ? O62 2FP 364 A 1 HETATM 16 O O63 2FP . . . B 2 -1.204 23.684 43.209 1 12.99 ? O63 2FP 364 A 1 HETATM 17 P P1 2FP . . . B 2 3.128 34.189 40.797 1 12.99 ? P1 2FP 364 A 1 HETATM 18 O O11 2FP . . . B 2 3.678 35.55 41.647 1 12.99 ? O11 2FP 364 A 1 HETATM 19 O O12 2FP . . . B 2 1.778 34.775 39.95 1 12.99 ? O12 2FP 364 A 1 HETATM 20 O O13 2FP . . . B 2 4.403 33.907 39.757 1 12.99 ? O13 2FP 364 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #