data_4ALL
#
_model_server_result.job_id            GEhnZlaxXe1Gv9vxa8shRg 
_model_server_result.datetime_utc      '2024-10-30 03:31:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4all 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1257}' 
#
_entry.id    4ALL 
#
_exptl.entry_id    4ALL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4ALL 
_cell.length_a            83.52 
_cell.length_b            111.91 
_cell.length_c            111.64 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ALL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 I N N 
? 3 L N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 224 n n 
PA O2A NAP sing 225 n n 
PA O5B NAP sing 226 n n 
PA O3 NAP sing 227 n n 
O2A HOA2 NAP sing 228 n n 
O5B C5B NAP sing 229 n n 
C5B C4B NAP sing 230 n n 
C5B H51A NAP sing 231 n n 
C5B H52A NAP sing 232 n n 
C4B O4B NAP sing 233 n n 
C4B C3B NAP sing 234 n n 
C4B H4B NAP sing 235 n n 
O4B C1B NAP sing 236 n n 
C3B O3B NAP sing 237 n n 
C3B C2B NAP sing 238 n n 
C3B H3B NAP sing 239 n n 
O3B HO3A NAP sing 240 n n 
C2B O2B NAP sing 241 n n 
C2B C1B NAP sing 242 n n 
C2B H2B NAP sing 243 n n 
O2B P2B NAP sing 244 n n 
C1B N9A NAP sing 245 n n 
C1B H1B NAP sing 246 n n 
N9A C8A NAP sing 247 n y 
N9A C4A NAP sing 248 n y 
C8A N7A NAP doub 249 n y 
C8A H8A NAP sing 250 n n 
N7A C5A NAP sing 251 n y 
C5A C6A NAP sing 252 n y 
C5A C4A NAP doub 253 n y 
C6A N6A NAP sing 254 n n 
C6A N1A NAP doub 255 n y 
N6A H61A NAP sing 256 n n 
N6A H62A NAP sing 257 n n 
N1A C2A NAP sing 258 n y 
C2A N3A NAP doub 259 n y 
C2A H2A NAP sing 260 n n 
N3A C4A NAP sing 261 n y 
O3 PN NAP sing 262 n n 
PN O1N NAP doub 263 n n 
PN O2N NAP sing 264 n n 
PN O5D NAP sing 265 n n 
O5D C5D NAP sing 266 n n 
C5D C4D NAP sing 267 n n 
C5D H51N NAP sing 268 n n 
C5D H52N NAP sing 269 n n 
C4D O4D NAP sing 270 n n 
C4D C3D NAP sing 271 n n 
C4D H4D NAP sing 272 n n 
O4D C1D NAP sing 273 n n 
C3D O3D NAP sing 274 n n 
C3D C2D NAP sing 275 n n 
C3D H3D NAP sing 276 n n 
O3D HO3N NAP sing 277 n n 
C2D O2D NAP sing 278 n n 
C2D C1D NAP sing 279 n n 
C2D H2D NAP sing 280 n n 
O2D HO2N NAP sing 281 n n 
C1D N1N NAP sing 282 n n 
C1D H1D NAP sing 283 n n 
N1N C2N NAP sing 284 n y 
N1N C6N NAP doub 285 n y 
C2N C3N NAP doub 286 n y 
C2N H2N NAP sing 287 n n 
C3N C7N NAP sing 288 n n 
C3N C4N NAP sing 289 n y 
C7N O7N NAP doub 290 n n 
C7N N7N NAP sing 291 n n 
N7N H71N NAP sing 292 n n 
N7N H72N NAP sing 293 n n 
C4N C5N NAP doub 294 n y 
C4N H4N NAP sing 295 n n 
C5N C6N NAP sing 296 n y 
C5N H5N NAP sing 297 n n 
C6N H6N NAP sing 298 n n 
P2B O1X NAP doub 299 n n 
P2B O2X NAP sing 300 n n 
P2B O3X NAP sing 301 n n 
O2X HOP2 NAP sing 302 n n 
O3X HOP3 NAP sing 303 n n 
#
_atom_sites.entry_id                     4ALL 
_atom_sites.fract_transf_matrix[1][1]    0.011973 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008936 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008957 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 TCL A 1 1257 1257 TCL TCL . 
F 3 NAP A 1 1258 1258 NAP NAP . 
G 3 NAP B 1 1257 1257 NAP NAP . 
H 2 TCL B 1 1258 1258 TCL TCL . 
I 3 NAP C 1 1257 1257 NAP NAP . 
J 2 TCL C 1 1258 1258 TCL TCL . 
K 2 TCL D 1 1257 1257 TCL TCL . 
L 3 NAP D 1 1258 1258 NAP NAP . 
M 4 HOH A 1 2001 2001 HOH HOH . 
M 4 HOH A 2 2002 2002 HOH HOH . 
M 4 HOH A 3 2003 2003 HOH HOH . 
M 4 HOH A 4 2004 2004 HOH HOH . 
N 4 HOH B 1 2001 2001 HOH HOH . 
N 4 HOH B 2 2002 2002 HOH HOH . 
N 4 HOH B 3 2003 2003 HOH HOH . 
O 4 HOH C 1 2001 2001 HOH HOH . 
P 4 HOH D 1 2001 2001 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . I 3 -33.177 -41.196 -3.368 1 61.36 ? PA NAP 1257 C 1 
HETATM 2 O O1A NAP . . . I 3 -34.406 -40.427 -3.638 1 62.66 ? O1A NAP 1257 C 1 
HETATM 3 O O2A NAP . . . I 3 -32.937 -41.374 -1.92 1 60.6 ? O2A NAP 1257 C 1 
HETATM 4 O O5B NAP . . . I 3 -33.234 -42.593 -4.136 1 63.61 ? O5B NAP 1257 C 1 
HETATM 5 C C5B NAP . . . I 3 -32.331 -43.618 -3.746 1 68.21 ? C5B NAP 1257 C 1 
HETATM 6 C C4B NAP . . . I 3 -32.988 -44.997 -3.643 1 69.97 ? C4B NAP 1257 C 1 
HETATM 7 O O4B NAP . . . I 3 -32.018 -45.992 -3.355 1 70.19 ? O4B NAP 1257 C 1 
HETATM 8 C C3B NAP . . . I 3 -34.027 -45.025 -2.513 1 72.03 ? C3B NAP 1257 C 1 
HETATM 9 O O3B NAP . . . I 3 -35.261 -45.553 -2.952 1 70.28 ? O3B NAP 1257 C 1 
HETATM 10 C C2B NAP . . . I 3 -33.445 -45.942 -1.466 1 73.99 ? C2B NAP 1257 C 1 
HETATM 11 O O2B NAP . . . I 3 -34.431 -46.693 -0.796 1 78.06 ? O2B NAP 1257 C 1 
HETATM 12 C C1B NAP . . . I 3 -32.689 -46.825 -2.431 1 72.64 ? C1B NAP 1257 C 1 
HETATM 13 N N9A NAP . . . I 3 -31.94 -47.882 -1.736 1 71.94 ? N9A NAP 1257 C 1 
HETATM 14 C C8A NAP . . . I 3 -30.876 -47.781 -0.886 1 71.09 ? C8A NAP 1257 C 1 
HETATM 15 N N7A NAP . . . I 3 -30.567 -49.039 -0.496 1 71.03 ? N7A NAP 1257 C 1 
HETATM 16 C C5A NAP . . . I 3 -31.42 -49.914 -1.073 1 70.8 ? C5A NAP 1257 C 1 
HETATM 17 C C6A NAP . . . I 3 -31.543 -51.291 -1.024 1 70.38 ? C6A NAP 1257 C 1 
HETATM 18 N N6A NAP . . . I 3 -30.708 -52 -0.274 1 70.88 ? N6A NAP 1257 C 1 
HETATM 19 N N1A NAP . . . I 3 -32.546 -51.912 -1.74 1 70.59 ? N1A NAP 1257 C 1 
HETATM 20 C C2A NAP . . . I 3 -33.43 -51.173 -2.513 1 70.74 ? C2A NAP 1257 C 1 
HETATM 21 N N3A NAP . . . I 3 -33.302 -49.805 -2.565 1 70.05 ? N3A NAP 1257 C 1 
HETATM 22 C C4A NAP . . . I 3 -32.307 -49.196 -1.853 1 71.44 ? C4A NAP 1257 C 1 
HETATM 23 O O3 NAP . . . I 3 -31.937 -40.465 -4.071 1 62.7 ? O3 NAP 1257 C 1 
HETATM 24 P PN NAP . . . I 3 -31.562 -40.251 -5.627 1 63.79 ? PN NAP 1257 C 1 
HETATM 25 O O1N NAP . . . I 3 -30.71 -39.048 -5.639 1 65.42 ? O1N NAP 1257 C 1 
HETATM 26 O O2N NAP . . . I 3 -32.73 -40.344 -6.55 1 61.41 ? O2N NAP 1257 C 1 
HETATM 27 O O5D NAP . . . I 3 -30.507 -41.471 -5.815 1 65.67 ? O5D NAP 1257 C 1 
HETATM 28 C C5D NAP . . . I 3 -30.619 -42.557 -6.725 1 64.34 ? C5D NAP 1257 C 1 
HETATM 29 C C4D NAP . . . I 3 -29.366 -42.745 -7.595 1 64.11 ? C4D NAP 1257 C 1 
HETATM 30 O O4D NAP . . . I 3 -28.902 -41.527 -8.159 1 63.95 ? O4D NAP 1257 C 1 
HETATM 31 C C3D NAP . . . I 3 -28.174 -43.346 -6.868 1 63.65 ? C3D NAP 1257 C 1 
HETATM 32 O O3D NAP . . . I 3 -27.626 -44.355 -7.703 1 63.71 ? O3D NAP 1257 C 1 
HETATM 33 C C2D NAP . . . I 3 -27.222 -42.171 -6.705 1 63.38 ? C2D NAP 1257 C 1 
HETATM 34 O O2D NAP . . . I 3 -25.87 -42.572 -6.595 1 64.64 ? O2D NAP 1257 C 1 
HETATM 35 C C1D NAP . . . I 3 -27.5 -41.436 -8 1 63.16 ? C1D NAP 1257 C 1 
HETATM 36 N N1N NAP . . . I 3 -27.051 -40.036 -8.118 1 61.78 ? N1N NAP 1257 C 1 
HETATM 37 C C2N NAP . . . I 3 -27.706 -39.028 -7.457 1 61.15 ? C2N NAP 1257 C 1 
HETATM 38 C C3N NAP . . . I 3 -27.281 -37.711 -7.62 1 60.28 ? C3N NAP 1257 C 1 
HETATM 39 C C7N NAP . . . I 3 -27.956 -36.56 -6.909 1 59.23 ? C7N NAP 1257 C 1 
HETATM 40 O O7N NAP . . . I 3 -27.448 -35.265 -7.135 1 57.96 ? O7N NAP 1257 C 1 
HETATM 41 N N7N NAP . . . I 3 -28.992 -36.765 -6.081 1 57.12 ? N7N NAP 1257 C 1 
HETATM 42 C C4N NAP . . . I 3 -26.199 -37.47 -8.471 1 61.07 ? C4N NAP 1257 C 1 
HETATM 43 C C5N NAP . . . I 3 -25.549 -38.501 -9.148 1 59.82 ? C5N NAP 1257 C 1 
HETATM 44 C C6N NAP . . . I 3 -25.997 -39.788 -8.961 1 60.29 ? C6N NAP 1257 C 1 
HETATM 45 P P2B NAP . . . I 3 -35.02 -46.31 0.66 1 82.39 ? P2B NAP 1257 C 1 
HETATM 46 O O1X NAP . . . I 3 -36.468 -46.776 0.636 1 83.02 ? O1X NAP 1257 C 1 
HETATM 47 O O2X NAP . . . I 3 -34.305 -47.058 1.768 1 81.87 ? O2X NAP 1257 C 1 
HETATM 48 O O3X NAP . . . I 3 -34.939 -44.815 0.919 1 81.43 ? O3X NAP 1257 C 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           48 
#