data_4ALV # _model_server_result.job_id aWLJovyLRKJDBpKV4cUR8w _model_server_result.datetime_utc '2024-11-22 11:03:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4alv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1308}' # _entry.id 4ALV # _exptl.entry_id 4ALV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 487.777 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-bromo-2-{2-chloro-4-[(piperidin-4-ylmethyl)amino]phenyl}[1]benzofuro[3,2-d]pyrimidin-4(3H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4ALV _cell.length_a 96.872 _cell.length_b 96.872 _cell.length_c 80.844 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ALV _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H20 Br Cl N4 O2' _chem_comp.formula_weight 487.777 _chem_comp.id R9P _chem_comp.mon_nstd_flag . _chem_comp.name 8-bromo-2-{2-chloro-4-[(piperidin-4-ylmethyl)amino]phenyl}[1]benzofuro[3,2-d]pyrimidin-4(3H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C14 R9P sing 287 n n C13 C12 R9P sing 288 n n C14 N3 R9P sing 289 n n N3 C15 R9P sing 290 n n C15 C16 R9P sing 291 n n C16 C12 R9P sing 292 n n C12 C11 R9P sing 293 n n C11 N2 R9P sing 294 n n N2 C10 R9P sing 295 n n C10 C17 R9P sing 296 n y C10 C9 R9P doub 297 n y C17 C18 R9P doub 298 n y C18 CL1 R9P sing 299 n n C18 C7 R9P sing 300 n y C9 C8 R9P sing 301 n y C8 C7 R9P doub 302 n y C7 C6 R9P sing 303 n n C6 N4 R9P doub 304 n n C6 N1 R9P sing 305 n n N4 C19 R9P sing 306 n n C19 C20 R9P sing 307 n y C19 C4 R9P doub 308 n y C20 C21 R9P sing 309 n y C20 C3 R9P doub 310 n y C21 C22 R9P doub 311 n y C22 BR1 R9P sing 312 n n C22 C1 R9P sing 313 n y C1 C2 R9P doub 314 n y C2 C3 R9P sing 315 n y C3 O1 R9P sing 316 n y O1 C4 R9P sing 317 n y C4 C5 R9P sing 318 n n C5 O2 R9P doub 319 n n C5 N1 R9P sing 320 n n C13 H131 R9P sing 321 n n C13 H132 R9P sing 322 n n C14 H141 R9P sing 323 n n C14 H142 R9P sing 324 n n C12 H12 R9P sing 325 n n N3 H3 R9P sing 326 n n C15 H151 R9P sing 327 n n C15 H152 R9P sing 328 n n C16 H161 R9P sing 329 n n C16 H162 R9P sing 330 n n C11 H111 R9P sing 331 n n C11 H112 R9P sing 332 n n N2 H2 R9P sing 333 n n C17 H17 R9P sing 334 n n C9 H9 R9P sing 335 n n C8 H8 R9P sing 336 n n N1 H1 R9P sing 337 n n C21 H21 R9P sing 338 n n C1 HA R9P sing 339 n n C2 HB R9P sing 340 n n # _atom_sites.entry_id 4ALV _atom_sites.fract_transf_matrix[1][1] 0.010323 _atom_sites.fract_transf_matrix[1][2] 0.00596 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01192 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01237 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD A 1 1307 1307 IMD IMD . C 3 R9P A 1 1308 1308 R9P R9P . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2041 2041 HOH HOH . D 4 HOH A 42 2042 2042 HOH HOH . D 4 HOH A 43 2043 2043 HOH HOH . D 4 HOH A 44 2044 2044 HOH HOH . D 4 HOH A 45 2045 2045 HOH HOH . D 4 HOH A 46 2046 2046 HOH HOH . D 4 HOH A 47 2047 2047 HOH HOH . D 4 HOH A 48 2048 2048 HOH HOH . D 4 HOH A 49 2049 2049 HOH HOH . D 4 HOH A 50 2050 2050 HOH HOH . D 4 HOH A 51 2051 2051 HOH HOH . D 4 HOH A 52 2052 2052 HOH HOH . D 4 HOH A 53 2053 2053 HOH HOH . D 4 HOH A 54 2054 2054 HOH HOH . D 4 HOH A 55 2055 2055 HOH HOH . D 4 HOH A 56 2056 2056 HOH HOH . D 4 HOH A 57 2057 2057 HOH HOH . D 4 HOH A 58 2058 2058 HOH HOH . D 4 HOH A 59 2059 2059 HOH HOH . D 4 HOH A 60 2060 2060 HOH HOH . D 4 HOH A 61 2061 2061 HOH HOH . D 4 HOH A 62 2062 2062 HOH HOH . D 4 HOH A 63 2063 2063 HOH HOH . D 4 HOH A 64 2064 2064 HOH HOH . D 4 HOH A 65 2065 2065 HOH HOH . D 4 HOH A 66 2066 2066 HOH HOH . D 4 HOH A 67 2067 2067 HOH HOH . D 4 HOH A 68 2068 2068 HOH HOH . D 4 HOH A 69 2069 2069 HOH HOH . D 4 HOH A 70 2070 2070 HOH HOH . D 4 HOH A 71 2071 2071 HOH HOH . D 4 HOH A 72 2072 2072 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 R9P . . . C 3 -22.656 32.919 7.815 1 49.22 ? C13 R9P 1308 A 1 HETATM 2 C C14 R9P . . . C 3 -23.523 34.125 8.201 1 49.8 ? C14 R9P 1308 A 1 HETATM 3 N N3 R9P . . . C 3 -24.638 33.764 9.122 1 48.94 ? N3 R9P 1308 A 1 HETATM 4 C C15 R9P . . . C 3 -24.19 32.949 10.294 1 51.02 ? C15 R9P 1308 A 1 HETATM 5 C C16 R9P . . . C 3 -23.377 31.71 9.851 1 50.6 ? C16 R9P 1308 A 1 HETATM 6 C C12 R9P . . . C 3 -23.369 31.67 8.325 1 49.94 ? C12 R9P 1308 A 1 HETATM 7 C C11 R9P . . . C 3 -22.838 30.336 7.787 1 49.58 ? C11 R9P 1308 A 1 HETATM 8 N N2 R9P . . . C 3 -21.825 30.456 6.738 1 50.79 ? N2 R9P 1308 A 1 HETATM 9 C C10 R9P . . . C 3 -21.918 30.807 5.443 1 50.95 ? C10 R9P 1308 A 1 HETATM 10 C C17 R9P . . . C 3 -21.108 31.857 5.052 1 52 ? C17 R9P 1308 A 1 HETATM 11 C C18 R9P . . . C 3 -21.042 32.325 3.758 1 50.96 ? C18 R9P 1308 A 1 HETATM 12 CL CL1 R9P . . . C 3 -19.986 33.617 3.444 1 51.37 ? CL1 R9P 1308 A 1 HETATM 13 C C9 R9P . . . C 3 -22.65 30.174 4.449 1 50.38 ? C9 R9P 1308 A 1 HETATM 14 C C8 R9P . . . C 3 -22.571 30.656 3.133 1 50.81 ? C8 R9P 1308 A 1 HETATM 15 C C7 R9P . . . C 3 -21.749 31.732 2.762 1 52.62 ? C7 R9P 1308 A 1 HETATM 16 C C6 R9P . . . C 3 -21.741 32.15 1.436 1 52.67 ? C6 R9P 1308 A 1 HETATM 17 N N4 R9P . . . C 3 -22.043 33.407 1.107 1 52.94 ? N4 R9P 1308 A 1 HETATM 18 C C19 R9P . . . C 3 -22.084 33.735 -0.185 1 53.17 ? C19 R9P 1308 A 1 HETATM 19 C C20 R9P . . . C 3 -22.371 34.89 -0.835 1 52.57 ? C20 R9P 1308 A 1 HETATM 20 C C21 R9P . . . C 3 -22.698 36.097 -0.364 1 52.91 ? C21 R9P 1308 A 1 HETATM 21 C C22 R9P . . . C 3 -22.938 37.152 -1.248 1 53.79 ? C22 R9P 1308 A 1 HETATM 22 BR BR1 R9P . . . C 3 -23.385 38.856 -0.44 1 59.63 ? BR1 R9P 1308 A 1 HETATM 23 C C1 R9P . . . C 3 -22.855 36.989 -2.627 1 52.94 ? C1 R9P 1308 A 1 HETATM 24 C C2 R9P . . . C 3 -22.52 35.736 -3.08 1 53.29 ? C2 R9P 1308 A 1 HETATM 25 C C3 R9P . . . C 3 -22.284 34.712 -2.19 1 52.69 ? C3 R9P 1308 A 1 HETATM 26 O O1 R9P . . . C 3 -21.955 33.436 -2.398 1 53.43 ? O1 R9P 1308 A 1 HETATM 27 C C4 R9P . . . C 3 -21.84 32.834 -1.202 1 53.59 ? C4 R9P 1308 A 1 HETATM 28 C C5 R9P . . . C 3 -21.528 31.554 -0.92 1 53.45 ? C5 R9P 1308 A 1 HETATM 29 O O2 R9P . . . C 3 -21.312 30.807 -1.87 1 52.4 ? O2 R9P 1308 A 1 HETATM 30 N N1 R9P . . . C 3 -21.474 31.201 0.429 1 53.69 ? N1 R9P 1308 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 30 #